RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 TDHQ8IZJ6 230 aa11.47□□□□□ -0.57
UFD1-210ENST00000494054 ANKS1AQ92625 1134 aa11.47□□□□□ -0.57
UFD1-210ENST00000494054 CPVLQ9H3G5 476 aa11.47□□□□□ -0.57
UFD1-210ENST00000494054 PRDM5Q9NQX1 630 aaPredicted RBP11.47□□□□□ -0.57
UFD1-210ENST00000494054 PDLIM7Q9NR12 457 aa11.47□□□□□ -0.57
UFD1-210ENST00000494054 ZSWIM5Q9P217 1185 aa11.47□□□□□ -0.57
UFD1-210ENST00000494054 TRIM43BA6NCK2 446 aa11.46□□□□□ -0.57
UFD1-210ENST00000494054 NFIBO00712 420 aa11.46□□□□□ -0.57
UFD1-210ENST00000494054 CTAGE5O15320 804 aa11.46□□□□□ -0.57
UFD1-210ENST00000494054 BAATQ14032 418 aaPredicted RBP11.46□□□□□ -0.57
UFD1-210ENST00000494054 IMMTQ16891 758 aaKnown RBP11.46□□□□□ -0.57
UFD1-210ENST00000494054 TMEM63BQ5T3F8 832 aa11.46□□□□□ -0.57
UFD1-210ENST00000494054 CLEC4DQ8WXI8 215 aa11.46□□□□□ -0.57
UFD1-210ENST00000494054 TRIM43Q96BQ3 446 aaPredicted RBP11.46□□□□□ -0.57
UFD1-210ENST00000494054 ZSCAN10Q96SZ4 725 aaPredicted RBP11.46□□□□□ -0.57
UFD1-210ENST00000494054 LBHD1Q9BQE6 289 aaPredicted RBP11.46□□□□□ -0.57
UFD1-210ENST00000494054 TSEN34Q9BSV6 310 aaKnown RBP11.46□□□□□ -0.57
UFD1-210ENST00000494054 UPF3AQ9H1J1 476 aaKnown RBP11.46□□□□□ -0.57
UFD1-210ENST00000494054 PDGFCQ9NRA1 345 aa11.46□□□□□ -0.57
UFD1-210ENST00000494054 PRKAG2Q9UGJ0 569 aa11.46□□□□□ -0.57
UFD1-210ENST00000494054 CTNNA3Q9UI47 895 aa11.46□□□□□ -0.57
UFD1-210ENST00000494054 LAMA4Q16363 1823 aa11.46□□□□□ -0.58
UFD1-210ENST00000494054 ASB14A6NK59 587 aa11.45□□□□□ -0.58
UFD1-210ENST00000494054 C6orf222P0C671 652 aaPredicted RBP11.45□□□□□ -0.58
UFD1-210ENST00000494054 ITGB8P26012 769 aa11.45□□□□□ -0.58
UFD1-210ENST00000494054 CHMLP26374 656 aa11.45□□□□□ -0.58
UFD1-210ENST00000494054 CST5P28325 142 aaPredicted RBP11.45□□□□□ -0.58
UFD1-210ENST00000494054 GJA9P57773 515 aa11.45□□□□□ -0.58
UFD1-210ENST00000494054 TNFAIP2Q03169 654 aa11.45□□□□□ -0.58
UFD1-210ENST00000494054 PTH1RQ03431 593 aa11.45□□□□□ -0.58
UFD1-210ENST00000494054 LRIT3Q3SXY7 679 aa11.45□□□□□ -0.58
UFD1-210ENST00000494054 TAPT1Q6NXT6 567 aa11.45□□□□□ -0.58
UFD1-210ENST00000494054 EEPD1Q7L9B9 569 aa11.45□□□□□ -0.58
UFD1-210ENST00000494054 IQCA1Q86XH1 822 aa11.45□□□□□ -0.58
UFD1-210ENST00000494054 ENAHQ8N8S7 591 aaPredicted RBP11.45□□□□□ -0.58
UFD1-210ENST00000494054 PNMA1Q8ND90 353 aa11.45□□□□□ -0.58
UFD1-210ENST00000494054 BADQ92934 168 aa11.45□□□□□ -0.58
UFD1-210ENST00000494054 UBA5Q9GZZ9 404 aa11.45□□□□□ -0.58
UFD1-210ENST00000494054 LCTP09848 1927 aa11.45□□□□□ -0.58
UFD1-210ENST00000494054 TNKSO95271 1327 aa11.44□□□□□ -0.58
UFD1-210ENST00000494054 MOXD2PA6NHM9 499 aa11.44□□□□□ -0.58
UFD1-210ENST00000494054 PQBP1O60828 265 aaKnown RBP11.44□□□□□ -0.58
UFD1-210ENST00000494054 ASGR1P07306 291 aa11.44□□□□□ -0.58
UFD1-210ENST00000494054 SMPD1P17405 629 aa11.44□□□□□ -0.58
UFD1-210ENST00000494054 NT5C2P49902 561 aa11.44□□□□□ -0.58
UFD1-210ENST00000494054 BEX3Q00994 111 aa11.44□□□□□ -0.58
UFD1-210ENST00000494054 CCDC178Q5BJE1 867 aa11.44□□□□□ -0.58
UFD1-210ENST00000494054 GPATCH4Q5T3I0 446 aaKnown RBP11.44□□□□□ -0.58
UFD1-210ENST00000494054 SLC30A10Q6XR72 485 aa11.44□□□□□ -0.58
UFD1-210ENST00000494054 FBXO16Q8IX29 292 aaPredicted RBP11.44□□□□□ -0.58
UFD1-210ENST00000494054 MORC4Q8TE76 937 aa11.44□□□□□ -0.58
UFD1-210ENST00000494054 KAT14Q9H8E8 782 aa11.44□□□□□ -0.58
UFD1-210ENST00000494054 STARD7Q9NQZ5 370 aa11.44□□□□□ -0.58
UFD1-210ENST00000494054 GNEQ9Y223 722 aaKnown RBP11.44□□□□□ -0.58
UFD1-210ENST00000494054 TAF6LQ9Y6J9 622 aa11.44□□□□□ -0.58
UFD1-210ENST00000494054 LTBP2Q14767 1821 aa11.44□□□□□ -0.58
UFD1-210ENST00000494054 WDR19Q8NEZ3 1342 aa11.43□□□□□ -0.58
UFD1-210ENST00000494054 PTPDC1A2A3K4 754 aa11.43□□□□□ -0.58
UFD1-210ENST00000494054 KIAA0355O15063 1070 aa11.43□□□□□ -0.58
UFD1-210ENST00000494054 CLTBP09497 229 aa11.43□□□□□ -0.58
UFD1-210ENST00000494054 CALML3P27482 149 aa11.43□□□□□ -0.58
UFD1-210ENST00000494054 CDK7P50613 346 aa11.43□□□□□ -0.58
UFD1-210ENST00000494054 ALDH5A1P51649 535 aaPredicted RBP11.43□□□□□ -0.58
UFD1-210ENST00000494054 NKX3-2P78367 333 aa11.43□□□□□ -0.58
UFD1-210ENST00000494054 FAAP100Q0VG06 881 aa11.43□□□□□ -0.58
UFD1-210ENST00000494054 GNASQ5JWF2 1037 aa11.43□□□□□ -0.58
UFD1-210ENST00000494054 C9orf50Q5SZB4 431 aa11.43□□□□□ -0.58
UFD1-210ENST00000494054 NOL8Q76FK4 1167 aaKnown RBP11.43□□□□□ -0.58
UFD1-210ENST00000494054 CYB5R4Q7L1T6 521 aa11.43□□□□□ -0.58
UFD1-210ENST00000494054 ANKRD33Q7Z3H0 272 aa11.43□□□□□ -0.58
UFD1-210ENST00000494054 PCSK9Q8NBP7 692 aaKnown RBP11.43□□□□□ -0.58
UFD1-210ENST00000494054 NUP133Q8WUM0 1156 aa11.43□□□□□ -0.58
UFD1-210ENST00000494054 TBC1D5Q92609 795 aa11.43□□□□□ -0.58
UFD1-210ENST00000494054 KRT23Q9C075 422 aa11.43□□□□□ -0.58
UFD1-210ENST00000494054 SPC25Q9HBM1 224 aa11.43□□□□□ -0.58
UFD1-210ENST00000494054 LAMA3Q16787 3333 aa11.43□□□□□ -0.58
UFD1-210ENST00000494054 ELP1O95163 1332 aa11.42□□□□□ -0.58
UFD1-210ENST00000494054 RAD50Q92878 1312 aa11.42□□□□□ -0.58
UFD1-210ENST00000494054 SGSM2O43147 1006 aa11.42□□□□□ -0.58
UFD1-210ENST00000494054 DYNC1LI2O43237 492 aaPredicted RBP11.42□□□□□ -0.58
UFD1-210ENST00000494054 CYP21A2P08686 494 aa11.42□□□□□ -0.58
UFD1-210ENST00000494054 EPHB4P54760 987 aa11.42□□□□□ -0.58
UFD1-210ENST00000494054 RPS6P62753 249 aaKnown RBP11.42□□□□□ -0.58
UFD1-210ENST00000494054 SEC23AQ15436 765 aa11.42□□□□□ -0.58
UFD1-210ENST00000494054 SHHQ15465 462 aa11.42□□□□□ -0.58
UFD1-210ENST00000494054 CDC37Q16543 378 aaPredicted RBP11.42□□□□□ -0.58
UFD1-210ENST00000494054 USH1GQ495M9 461 aa11.42□□□□□ -0.58
UFD1-210ENST00000494054 IQSEC1Q6DN90 963 aa11.42□□□□□ -0.58
UFD1-210ENST00000494054 RNF207Q6ZRF8 634 aa11.42□□□□□ -0.58
UFD1-210ENST00000494054 KIAA1211Q6ZU35 1233 aa11.42□□□□□ -0.58
UFD1-210ENST00000494054 Q7L0L9 218 aa11.42□□□□□ -0.58
UFD1-210ENST00000494054 ADGRF4Q8IZF3 695 aa11.42□□□□□ -0.58
UFD1-210ENST00000494054 STAG2Q8N3U4 1231 aa11.42□□□□□ -0.58
UFD1-210ENST00000494054 GLT1D1Q96MS3 346 aa11.42□□□□□ -0.58
UFD1-210ENST00000494054 TOX2Q96NM4 488 aa11.42□□□□□ -0.58
UFD1-210ENST00000494054 CNNM2Q9H8M5 875 aa11.42□□□□□ -0.58
UFD1-210ENST00000494054 TMEM39AQ9NV64 488 aa11.42□□□□□ -0.58
UFD1-210ENST00000494054 ADD3Q9UEY8 706 aaKnown RBP11.42□□□□□ -0.58
UFD1-210ENST00000494054 LRRC37A2A6NM11 1700 aa11.42□□□□□ -0.58
UFD1-210ENST00000494054 DCDC2CA8MYV0 355 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms