RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 TTC19Q6DKK2 380 aaPredicted RBP8.55□□□□□ -1.04
BRCA1-221ENST00000493795 SPOPLQ6IQ16 392 aa8.55□□□□□ -1.04
BRCA1-221ENST00000493795 TRIM67Q6ZTA4 783 aa8.55□□□□□ -1.04
BRCA1-221ENST00000493795 METTL13Q8N6R0 699 aa8.55□□□□□ -1.04
BRCA1-221ENST00000493795 NCLNQ969V3 563 aa8.55□□□□□ -1.04
BRCA1-221ENST00000493795 TRIM45Q9H8W5 580 aaPredicted RBP8.55□□□□□ -1.04
BRCA1-221ENST00000493795 ZSCAN32Q9NX65 697 aa8.55□□□□□ -1.04
BRCA1-221ENST00000493795 ANGEL1Q9UNK9 670 aaKnown RBP8.55□□□□□ -1.04
BRCA1-221ENST00000493795 RRP15Q9Y3B9 282 aaKnown RBP8.55□□□□□ -1.04
BRCA1-221ENST00000493795 CFLARO15519 480 aa8.55□□□□□ -1.04
BRCA1-221ENST00000493795 SPAG7O75391 227 aa8.55□□□□□ -1.04
BRCA1-221ENST00000493795 PMS1P54277 932 aaKnown RBP8.55□□□□□ -1.04
BRCA1-221ENST00000493795 MORC3Q14149 939 aa8.55□□□□□ -1.04
BRCA1-221ENST00000493795 USH1GQ495M9 461 aa8.55□□□□□ -1.04
BRCA1-221ENST00000493795 GPBP1Q86WP2 473 aa8.55□□□□□ -1.04
BRCA1-221ENST00000493795 STX19Q8N4C7 294 aa8.55□□□□□ -1.04
BRCA1-221ENST00000493795 RNF169Q8NCN4 708 aa8.55□□□□□ -1.04
BRCA1-221ENST00000493795 CNOT10Q9H9A5 744 aaKnown RBP8.55□□□□□ -1.04
BRCA1-221ENST00000493795 BCL2L12Q9HB09 334 aa8.55□□□□□ -1.04
BRCA1-221ENST00000493795 MRFAP1Q9Y605 127 aa8.55□□□□□ -1.04
BRCA1-221ENST00000493795 SYNJ2BP-COX16A0A087WUM0 186 aa8.55□□□□□ -1.04
BRCA1-221ENST00000493795 SERPINB2P05120 415 aa8.55□□□□□ -1.04
BRCA1-221ENST00000493795 NCF2P19878 526 aaPredicted RBP8.55□□□□□ -1.04
BRCA1-221ENST00000493795 GUCY2DQ02846 1103 aa8.55□□□□□ -1.04
BRCA1-221ENST00000493795 DYNC1I2Q13409 638 aaKnown RBP8.55□□□□□ -1.04
BRCA1-221ENST00000493795 GNPTABQ3T906 1256 aa8.55□□□□□ -1.04
BRCA1-221ENST00000493795 ANGPTL8Q6UXH0 198 aa8.55□□□□□ -1.04
BRCA1-221ENST00000493795 NSMFQ6X4W1 530 aa8.55□□□□□ -1.04
BRCA1-221ENST00000493795 MRPL50Q8N5N7 158 aaKnown RBP8.55□□□□□ -1.04
BRCA1-221ENST00000493795 TRIM11Q96F44 468 aa8.55□□□□□ -1.04
BRCA1-221ENST00000493795 NAF1Q96HR8 494 aaKnown RBP8.55□□□□□ -1.04
BRCA1-221ENST00000493795 BEGAINQ9BUH8 593 aa8.55□□□□□ -1.04
BRCA1-221ENST00000493795 HAUS4Q9H6D7 363 aa8.55□□□□□ -1.04
BRCA1-221ENST00000493795 COX16Q9P0S2 106 aa8.55□□□□□ -1.04
BRCA1-221ENST00000493795 RTCBQ9Y3I0 505 aaKnown RBP8.55□□□□□ -1.04
BRCA1-221ENST00000493795 GAS7O60861 476 aa8.54□□□□□ -1.04
BRCA1-221ENST00000493795 ZKSCAN8Q15776 578 aaPredicted RBP8.54□□□□□ -1.04
BRCA1-221ENST00000493795 GRAMD1BQ3KR37 738 aa8.54□□□□□ -1.04
BRCA1-221ENST00000493795 ADAT2Q7Z6V5 191 aaKnown RBP8.54□□□□□ -1.04
BRCA1-221ENST00000493795 TRMT44Q8IYL2 757 aaKnown RBP8.54□□□□□ -1.04
BRCA1-221ENST00000493795 ENOX1Q8TC92 643 aaKnown RBP8.54□□□□□ -1.04
BRCA1-221ENST00000493795 N4BP2L2Q92802 583 aaPredicted RBP8.54□□□□□ -1.04
BRCA1-221ENST00000493795 LMCD1Q9NZU5 365 aa8.54□□□□□ -1.04
BRCA1-221ENST00000493795 PTPN22Q9Y2R2 807 aa8.54□□□□□ -1.04
BRCA1-221ENST00000493795 PPP2R2CQ9Y2T4 447 aa8.54□□□□□ -1.04
BRCA1-221ENST00000493795 K7ENM7 598 aa8.54□□□□□ -1.04
BRCA1-221ENST00000493795 MT-ND3P03897 115 aa8.54□□□□□ -1.04
BRCA1-221ENST00000493795 HSPA6P17066 643 aa8.54□□□□□ -1.04
BRCA1-221ENST00000493795 ZYXQ15942 572 aaKnown RBP8.54□□□□□ -1.04
BRCA1-221ENST00000493795 AOC3Q16853 763 aa8.54□□□□□ -1.04
BRCA1-221ENST00000493795 POLE3Q9NRF9 147 aa8.54□□□□□ -1.04
BRCA1-221ENST00000493795 ZNF212Q9UDV6 495 aa8.54□□□□□ -1.04
BRCA1-221ENST00000493795 SLC27A2O14975 620 aa8.54□□□□□ -1.04
BRCA1-221ENST00000493795 E2F6O75461 281 aa8.54□□□□□ -1.04
BRCA1-221ENST00000493795 H2AFZP0C0S5 128 aa8.54□□□□□ -1.04
BRCA1-221ENST00000493795 TMEM191BP0C7N4 346 aa8.54□□□□□ -1.04
BRCA1-221ENST00000493795 PIK3CAP42336 1068 aa8.54□□□□□ -1.04
BRCA1-221ENST00000493795 KLC3Q6P597 504 aa8.54□□□□□ -1.04
BRCA1-221ENST00000493795 H2AFVQ71UI9 128 aa8.54□□□□□ -1.04
BRCA1-221ENST00000493795 PATL1Q86TB9 770 aaKnown RBP8.54□□□□□ -1.04
BRCA1-221ENST00000493795 MCF2L2Q86YR7 1114 aa8.54□□□□□ -1.04
BRCA1-221ENST00000493795 ARMT1Q9H993 441 aa8.54□□□□□ -1.04
BRCA1-221ENST00000493795 PDE11AQ9HCR9 933 aa8.54□□□□□ -1.04
BRCA1-221ENST00000493795 JAG2Q9Y219 1238 aa8.54□□□□□ -1.04
BRCA1-221ENST00000493795 TLR3O15455 904 aaKnown RBP8.54□□□□□ -1.04
BRCA1-221ENST00000493795 CFBP00751 764 aa8.54□□□□□ -1.04
BRCA1-221ENST00000493795 SOX5P35711 763 aa8.54□□□□□ -1.04
BRCA1-221ENST00000493795 BPIFB4P59827 614 aa8.54□□□□□ -1.04
BRCA1-221ENST00000493795 GRIN1Q05586 938 aa8.54□□□□□ -1.04
BRCA1-221ENST00000493795 TCP11X2Q5H9J9 407 aa8.54□□□□□ -1.04
BRCA1-221ENST00000493795 KHDRBS2Q5VWX1 349 aaKnown RBP8.54□□□□□ -1.04
BRCA1-221ENST00000493795 MCTP2Q6DN12 878 aa8.54□□□□□ -1.04
BRCA1-221ENST00000493795 LINS1Q8NG48 757 aa8.54□□□□□ -1.04
BRCA1-221ENST00000493795 CCHCR1Q8TD31 782 aa8.54□□□□□ -1.04
BRCA1-221ENST00000493795 ACSBG1Q96GR2 724 aa8.54□□□□□ -1.04
BRCA1-221ENST00000493795 DBNLQ9UJU6 430 aaKnown RBP8.54□□□□□ -1.04
BRCA1-221ENST00000493795 A0A087WUV0 522 aaPredicted RBP8.53□□□□□ -1.04
BRCA1-221ENST00000493795 ESRRAP11474 423 aaPredicted RBP8.53□□□□□ -1.04
BRCA1-221ENST00000493795 GUCY2CP25092 1073 aa8.53□□□□□ -1.04
BRCA1-221ENST00000493795 OCRLQ01968 901 aa8.53□□□□□ -1.04
BRCA1-221ENST00000493795 TEDDM1Q5T9Z0 273 aa8.53□□□□□ -1.04
BRCA1-221ENST00000493795 MTBPQ96DY7 904 aa8.53□□□□□ -1.04
BRCA1-221ENST00000493795 GSDMAQ96QA5 445 aa8.53□□□□□ -1.04
BRCA1-221ENST00000493795 XPO4Q9C0E2 1151 aaKnown RBP8.53□□□□□ -1.04
BRCA1-221ENST00000493795 ING2Q9H160 280 aa8.53□□□□□ -1.04
BRCA1-221ENST00000493795 MLXIPQ9HAP2 919 aa8.53□□□□□ -1.04
BRCA1-221ENST00000493795 METTL14Q9HCE5 456 aaKnown RBP8.53□□□□□ -1.04
BRCA1-221ENST00000493795 ARMCX3Q9UH62 379 aaPredicted RBP8.53□□□□□ -1.04
BRCA1-221ENST00000493795 SLC12A6Q9UHW9 1150 aa8.53□□□□□ -1.04
BRCA1-221ENST00000493795 EHBP1L1Q8N3D4 1523 aa8.53□□□□□ -1.04
BRCA1-221ENST00000493795 SBNO1A3KN83 1393 aa8.53□□□□□ -1.04
BRCA1-221ENST00000493795 ANKRD36BQ8N2N9 1353 aa8.53□□□□□ -1.04
BRCA1-221ENST00000493795 FAM170AA1A519 330 aa8.53□□□□□ -1.04
BRCA1-221ENST00000493795 ZNF263O14978 683 aa8.53□□□□□ -1.04
BRCA1-221ENST00000493795 ATXN8OSP0DMR3 200 aa8.53□□□□□ -1.04
BRCA1-221ENST00000493795 PPARGP37231 505 aaPredicted RBP8.53□□□□□ -1.04
BRCA1-221ENST00000493795 PNOCQ13519 176 aa8.53□□□□□ -1.04
BRCA1-221ENST00000493795 KRT33BQ14525 404 aa8.53□□□□□ -1.04
BRCA1-221ENST00000493795 AKAP4Q5JQC9 854 aa8.53□□□□□ -1.04
BRCA1-221ENST00000493795 KCTD16Q68DU8 428 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms