RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 FAM102BQ5T8I3 360 aa22■■□□□ 1.11
RNF40-203ENST00000493683 STAG1Q8WVM7 1258 aa22■■□□□ 1.11
RNF40-203ENST00000493683 ZNF496Q96IT1 587 aaPredicted RBP22■■□□□ 1.11
RNF40-203ENST00000493683 BUB1O43683 1085 aa22■■□□□ 1.11
RNF40-203ENST00000493683 GPT2Q8TD30 523 aa22■■□□□ 1.11
RNF40-203ENST00000493683 HSPA6P17066 643 aa21.99■■□□□ 1.11
RNF40-203ENST00000493683 PDIA3P30101 505 aaKnown RBP21.99■■□□□ 1.11
RNF40-203ENST00000493683 ZYXQ15942 572 aaKnown RBP21.99■■□□□ 1.11
RNF40-203ENST00000493683 STK17AQ9UEE5 414 aa21.99■■□□□ 1.11
RNF40-203ENST00000493683 CCDC197Q8NCU1 140 aa21.99■■□□□ 1.11
RNF40-203ENST00000493683 OSBPL3Q9H4L5 887 aa21.99■■□□□ 1.11
RNF40-203ENST00000493683 HESX1Q9UBX0 185 aa21.99■■□□□ 1.11
RNF40-203ENST00000493683 EXOC3L4Q17RC7 722 aa21.99■■□□□ 1.11
RNF40-203ENST00000493683 DPH5Q9H2P9 285 aa21.99■■□□□ 1.11
RNF40-203ENST00000493683 NSFP46459 744 aaKnown RBP21.99■■□□□ 1.11
RNF40-203ENST00000493683 MAP4K1Q92918 833 aa21.99■■□□□ 1.11
RNF40-203ENST00000493683 hCG_1984214I3L0E3 225 aa21.98■■□□□ 1.11
RNF40-203ENST00000493683 ERCC3P19447 782 aa21.98■■□□□ 1.11
RNF40-203ENST00000493683 ZNF713Q8N859 430 aaPredicted RBP21.98■■□□□ 1.11
RNF40-203ENST00000493683 RDH13Q8NBN7 331 aa21.98■■□□□ 1.11
RNF40-203ENST00000493683 SYMPKQ92797 1274 aaKnown RBP21.98■■□□□ 1.11
RNF40-203ENST00000493683 RNF8O76064 485 aa21.98■■□□□ 1.11
RNF40-203ENST00000493683 PCCAP05165 728 aaPredicted RBP21.98■■□□□ 1.11
RNF40-203ENST00000493683 ABCD1P33897 745 aa21.98■■□□□ 1.11
RNF40-203ENST00000493683 MFAP3P55082 362 aa21.98■■□□□ 1.11
RNF40-203ENST00000493683 DLGAP5Q15398 846 aa21.98■■□□□ 1.11
RNF40-203ENST00000493683 PRR16Q569H4 304 aa21.98■■□□□ 1.11
RNF40-203ENST00000493683 DNAJC10Q8IXB1 793 aa21.98■■□□□ 1.11
RNF40-203ENST00000493683 EAF2Q96CJ1 260 aaPredicted RBP21.98■■□□□ 1.11
RNF40-203ENST00000493683 DDX27Q96GQ7 796 aaKnown RBP21.98■■□□□ 1.11
RNF40-203ENST00000493683 USP40Q9NVE5 1235 aa21.98■■□□□ 1.11
RNF40-203ENST00000493683 JRKLQ9Y4A0 524 aa21.98■■□□□ 1.11
RNF40-203ENST00000493683 hCG_1642624A0A1W2PR95 340 aa21.98■■□□□ 1.11
RNF40-203ENST00000493683 PLEKHG3A1L390 1219 aa21.98■■□□□ 1.11
RNF40-203ENST00000493683 KLRF2D3W0D1 207 aa21.98■■□□□ 1.11
RNF40-203ENST00000493683 WDR46O15213 610 aaKnown RBP21.98■■□□□ 1.11
RNF40-203ENST00000493683 ATP1A2P50993 1020 aa21.98■■□□□ 1.11
RNF40-203ENST00000493683 ST7Q9NRC1 585 aa21.98■■□□□ 1.11
RNF40-203ENST00000493683 SLC5A4Q9NY91 659 aa21.98■■□□□ 1.11
RNF40-203ENST00000493683 GAP43P17677 238 aa21.98■■□□□ 1.11
RNF40-203ENST00000493683 RNF26Q9BY78 433 aaPredicted RBP21.98■■□□□ 1.11
RNF40-203ENST00000493683 IPO11Q9UI26 975 aaKnown RBP21.98■■□□□ 1.11
RNF40-203ENST00000493683 NDUFB9Q9Y6M9 179 aa21.98■■□□□ 1.11
RNF40-203ENST00000493683 RBBP5Q15291 538 aaKnown RBP21.98■■□□□ 1.11
RNF40-203ENST00000493683 RNF168Q8IYW5 571 aaPredicted RBP21.98■■□□□ 1.11
RNF40-203ENST00000493683 CFAP61Q8NHU2 1237 aa21.98■■□□□ 1.11
RNF40-203ENST00000493683 CIAO1O76071 339 aa21.97■■□□□ 1.11
RNF40-203ENST00000493683 ZBTB38Q8NAP3 1195 aaPredicted RBP21.97■■□□□ 1.11
RNF40-203ENST00000493683 SDCCAG3Q96C92 435 aa21.97■■□□□ 1.11
RNF40-203ENST00000493683 GINS2Q9Y248 185 aa21.97■■□□□ 1.11
RNF40-203ENST00000493683 GLG1Q92896 1179 aa21.97■■□□□ 1.11
RNF40-203ENST00000493683 CNOT6LQ96LI5 555 aaKnown RBP21.97■■□□□ 1.11
RNF40-203ENST00000493683 ADPGKQ9BRR6 497 aa21.97■■□□□ 1.11
RNF40-203ENST00000493683 TUBB6Q9BUF5 446 aa21.97■■□□□ 1.11
RNF40-203ENST00000493683 SEMA3EO15041 775 aa21.97■■□□□ 1.11
RNF40-203ENST00000493683 ATP2B4P23634 1241 aa21.97■■□□□ 1.11
RNF40-203ENST00000493683 GUCY2DQ02846 1103 aa21.97■■□□□ 1.11
RNF40-203ENST00000493683 DMP1Q13316 513 aaPredicted RBP21.97■■□□□ 1.11
RNF40-203ENST00000493683 C10orf76Q5T2E6 689 aa21.97■■□□□ 1.11
RNF40-203ENST00000493683 ARMCX5Q6P1M9 558 aa21.97■■□□□ 1.11
RNF40-203ENST00000493683 TACO1Q9BSH4 297 aaKnown RBP21.97■■□□□ 1.11
RNF40-203ENST00000493683 TUBGCP2Q9BSJ2 902 aa21.97■■□□□ 1.11
RNF40-203ENST00000493683 NCKAP5LQ9HCH0 1330 aa21.97■■□□□ 1.11
RNF40-203ENST00000493683 PPFIA2O75334 1257 aa21.97■■□□□ 1.11
RNF40-203ENST00000493683 GCKP35557 465 aa21.97■■□□□ 1.11
RNF40-203ENST00000493683 ADD1P35611 737 aaKnown RBP21.97■■□□□ 1.11
RNF40-203ENST00000493683 FBXO11Q86XK2 927 aa21.97■■□□□ 1.11
RNF40-203ENST00000493683 EFCAB13Q8IY85 973 aa21.97■■□□□ 1.11
RNF40-203ENST00000493683 LSG1Q9H089 658 aaKnown RBP21.97■■□□□ 1.11
RNF40-203ENST00000493683 EFCC1Q9HA90 598 aa21.97■■□□□ 1.11
RNF40-203ENST00000493683 ABCC12Q96J65 1359 aa21.97■■□□□ 1.11
RNF40-203ENST00000493683 OPHN1O60890 802 aa21.96■■□□□ 1.11
RNF40-203ENST00000493683 CNOT10Q9H9A5 744 aaKnown RBP21.96■■□□□ 1.11
RNF40-203ENST00000493683 PDE11AQ9HCR9 933 aa21.96■■□□□ 1.11
RNF40-203ENST00000493683 COPRSQ9NQ92 184 aa21.96■■□□□ 1.11
RNF40-203ENST00000493683 INTS9Q9NV88 658 aaKnown RBP21.96■■□□□ 1.11
RNF40-203ENST00000493683 BTBD18B2RXH4 712 aa21.96■■□□□ 1.11
RNF40-203ENST00000493683 PTK2Q05397 1052 aa21.96■■□□□ 1.11
RNF40-203ENST00000493683 BSPRYQ5W0U4 402 aa21.96■■□□□ 1.11
RNF40-203ENST00000493683 FGAP02671 866 aa21.96■■□□□ 1.11
RNF40-203ENST00000493683 PTGDRQ13258 359 aa21.96■■□□□ 1.11
RNF40-203ENST00000493683 ARHGEF16Q5VV41 709 aa21.96■■□□□ 1.11
RNF40-203ENST00000493683 ABCC2Q92887 1545 aa21.96■■□□□ 1.11
RNF40-203ENST00000493683 SART1O43290 800 aaKnown RBP21.96■■□□□ 1.11
RNF40-203ENST00000493683 XKR9Q5GH70 373 aa21.96■■□□□ 1.11
RNF40-203ENST00000493683 CCHCR1Q8TD31 782 aa21.96■■□□□ 1.11
RNF40-203ENST00000493683 PALD1Q9ULE6 856 aa21.96■■□□□ 1.11
RNF40-203ENST00000493683 MYCBPQ99417 103 aaPredicted RBP21.95■■□□□ 1.1
RNF40-203ENST00000493683 BAG5Q9UL15 447 aa21.95■■□□□ 1.1
RNF40-203ENST00000493683 ZNF148Q9UQR1 794 aa21.95■■□□□ 1.1
RNF40-203ENST00000493683 PPP2R5CQ13362 524 aa21.95■■□□□ 1.1
RNF40-203ENST00000493683 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.95■■□□□ 1.1
RNF40-203ENST00000493683 TTLL3Q9Y4R7 772 aa21.95■■□□□ 1.1
RNF40-203ENST00000493683 ASPHQ12797 758 aa21.95■■□□□ 1.1
RNF40-203ENST00000493683 NXNQ6DKJ4 435 aa21.95■■□□□ 1.1
RNF40-203ENST00000493683 ANKRD35Q8N283 1001 aa21.95■■□□□ 1.1
RNF40-203ENST00000493683 NLRP7Q8WX94 980 aa21.95■■□□□ 1.1
RNF40-203ENST00000493683 CASP14P31944 242 aa21.94■■□□□ 1.1
RNF40-203ENST00000493683 NT5C2P49902 561 aa21.94■■□□□ 1.1
RNF40-203ENST00000493683 MFSD14BQ5SR56 506 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms