RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 GCLCP48506 637 aaPredicted RBP19.86■□□□□ 0.77
LIME1-208ENST00000493265 SNRNP48Q6IEG0 339 aaKnown RBP19.86■□□□□ 0.77
LIME1-208ENST00000493265 MB21D1Q8N884 522 aa19.86■□□□□ 0.77
LIME1-208ENST00000493265 REPS2Q8NFH8 660 aa19.86■□□□□ 0.77
LIME1-208ENST00000493265 GTF3C2Q8WUA4 911 aaPredicted RBP19.86■□□□□ 0.77
LIME1-208ENST00000493265 COA7Q96BR5 231 aa19.86■□□□□ 0.77
LIME1-208ENST00000493265 MTMR8Q96EF0 704 aa19.86■□□□□ 0.77
LIME1-208ENST00000493265 HOMER2Q9NSB8 354 aa19.86■□□□□ 0.77
LIME1-208ENST00000493265 SMC3Q9UQE7 1217 aa19.86■□□□□ 0.77
LIME1-208ENST00000493265 RABGAP1Q9Y3P9 1069 aa19.86■□□□□ 0.77
LIME1-208ENST00000493265 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.86■□□□□ 0.77
LIME1-208ENST00000493265 ZNF536O15090 1300 aa19.85■□□□□ 0.77
LIME1-208ENST00000493265 ICAM1P05362 532 aa19.85■□□□□ 0.77
LIME1-208ENST00000493265 ALAS1P13196 640 aa19.85■□□□□ 0.77
LIME1-208ENST00000493265 ARHGEF6Q15052 776 aa19.85■□□□□ 0.77
LIME1-208ENST00000493265 HABP4Q5JVS0 413 aaKnown RBP19.85■□□□□ 0.77
LIME1-208ENST00000493265 AIFM3Q96NN9 605 aa19.85■□□□□ 0.77
LIME1-208ENST00000493265 AMNQ9BXJ7 453 aa19.85■□□□□ 0.77
LIME1-208ENST00000493265 ARHGAP39Q9C0H5 1083 aa19.85■□□□□ 0.77
LIME1-208ENST00000493265 A0A0G2JMZ2 1700 aa19.85■□□□□ 0.77
LIME1-208ENST00000493265 ADGRA2Q96PE1 1338 aa19.84■□□□□ 0.77
LIME1-208ENST00000493265 TLR2O60603 784 aa19.84■□□□□ 0.77
LIME1-208ENST00000493265 DEXIO95424 95 aa19.84■□□□□ 0.77
LIME1-208ENST00000493265 SCG2P13521 617 aa19.84■□□□□ 0.77
LIME1-208ENST00000493265 STAT3P40763 770 aa19.84■□□□□ 0.77
LIME1-208ENST00000493265 ERVK-9P63128 1117 aa19.84■□□□□ 0.77
LIME1-208ENST00000493265 ERVK-24P63145 666 aa19.84■□□□□ 0.77
LIME1-208ENST00000493265 PKN1Q16512 942 aa19.84■□□□□ 0.77
LIME1-208ENST00000493265 Q3C1V9 767 aa19.84■□□□□ 0.77
LIME1-208ENST00000493265 WDR78Q5VTH9 848 aa19.84■□□□□ 0.77
LIME1-208ENST00000493265 WWC2Q6AWC2 1192 aa19.84■□□□□ 0.77
LIME1-208ENST00000493265 FAM184AQ8NB25 1140 aa19.84■□□□□ 0.77
LIME1-208ENST00000493265 GPRC5AQ8NFJ5 357 aa19.84■□□□□ 0.77
LIME1-208ENST00000493265 SMARCC2Q8TAQ2 1214 aa19.84■□□□□ 0.77
LIME1-208ENST00000493265 SPATC1LQ9H0A9 340 aa19.84■□□□□ 0.77
LIME1-208ENST00000493265 RBM27Q9P2N5 1060 aaKnown RBP19.84■□□□□ 0.77
LIME1-208ENST00000493265 DAXXQ9UER7 740 aaPredicted RBP19.84■□□□□ 0.77
LIME1-208ENST00000493265 ZNF214Q9UL59 606 aaPredicted RBP19.84■□□□□ 0.77
LIME1-208ENST00000493265 PCDHA1Q9Y5I3 950 aa19.84■□□□□ 0.77
LIME1-208ENST00000493265 STK36Q9NRP7 1315 aa19.83■□□□□ 0.77
LIME1-208ENST00000493265 MYH6P13533 1939 aa19.83■□□□□ 0.77
LIME1-208ENST00000493265 FDPSP14324 419 aaKnown RBP19.83■□□□□ 0.77
LIME1-208ENST00000493265 GJB2P29033 226 aa19.83■□□□□ 0.77
LIME1-208ENST00000493265 PFKFB3Q16875 520 aaPredicted RBP19.83■□□□□ 0.77
LIME1-208ENST00000493265 NCAPG2Q86XI2 1143 aa19.83■□□□□ 0.77
LIME1-208ENST00000493265 CCAR1Q8IX12 1150 aaKnown RBP19.83■□□□□ 0.77
LIME1-208ENST00000493265 ALG1Q9BT22 464 aa19.83■□□□□ 0.77
LIME1-208ENST00000493265 MOV10L1Q9BXT6 1211 aaKnown RBP19.83■□□□□ 0.77
LIME1-208ENST00000493265 TEX13BQ9BXU2 312 aa19.83■□□□□ 0.77
LIME1-208ENST00000493265 RIPK3Q9Y572 518 aa19.83■□□□□ 0.77
LIME1-208ENST00000493265 OAZ1P54368 228 aa19.82■□□□□ 0.76
LIME1-208ENST00000493265 NAPAP54920 295 aa19.82■□□□□ 0.76
LIME1-208ENST00000493265 HMGN5P82970 282 aaKnown RBP19.82■□□□□ 0.76
LIME1-208ENST00000493265 C17orf99Q6UX52 265 aa19.82■□□□□ 0.76
LIME1-208ENST00000493265 SH3TC2Q8TF17 1288 aa19.82■□□□□ 0.76
LIME1-208ENST00000493265 CWC22Q9HCG8 908 aaKnown RBP19.82■□□□□ 0.76
LIME1-208ENST00000493265 VPS54Q9P1Q0 977 aa19.82■□□□□ 0.76
LIME1-208ENST00000493265 LACTBP83111 547 aaPredicted RBP19.81■□□□□ 0.76
LIME1-208ENST00000493265 KIF22Q14807 665 aa19.81■□□□□ 0.76
LIME1-208ENST00000493265 WASF1Q92558 559 aa19.81■□□□□ 0.76
LIME1-208ENST00000493265 TRERF1Q96PN7 1200 aa19.81■□□□□ 0.76
LIME1-208ENST00000493265 GJB4Q9NTQ9 266 aa19.81■□□□□ 0.76
LIME1-208ENST00000493265 RNF146Q9NTX7 359 aa19.81■□□□□ 0.76
LIME1-208ENST00000493265 MORF4L1Q9UBU8 362 aa19.81■□□□□ 0.76
LIME1-208ENST00000493265 ABCB11O95342 1321 aa19.8■□□□□ 0.76
LIME1-208ENST00000493265 STXBP3O00186 592 aa19.8■□□□□ 0.76
LIME1-208ENST00000493265 ATP2A1O14983 1001 aa19.8■□□□□ 0.76
LIME1-208ENST00000493265 BCRP11274 1271 aa19.8■□□□□ 0.76
LIME1-208ENST00000493265 ERCC3P19447 782 aa19.8■□□□□ 0.76
LIME1-208ENST00000493265 CCNA1P78396 465 aa19.8■□□□□ 0.76
LIME1-208ENST00000493265 FAM110CQ1W6H9 321 aa19.8■□□□□ 0.76
LIME1-208ENST00000493265 MUM1L1Q5H9M0 696 aa19.8■□□□□ 0.76
LIME1-208ENST00000493265 RIOX2Q8IUF8 465 aa19.8■□□□□ 0.76
LIME1-208ENST00000493265 INTS4Q96HW7 963 aaKnown RBP19.8■□□□□ 0.76
LIME1-208ENST00000493265 PORCNQ9H237 461 aa19.8■□□□□ 0.76
LIME1-208ENST00000493265 GUCY1B3Q02153 619 aa19.79■□□□□ 0.76
LIME1-208ENST00000493265 TRAF1Q13077 416 aa19.79■□□□□ 0.76
LIME1-208ENST00000493265 TYW1BQ6NUM6 668 aa19.79■□□□□ 0.76
LIME1-208ENST00000493265 BARHL2Q9NY43 387 aa19.79■□□□□ 0.76
LIME1-208ENST00000493265 MRPL11Q9Y3B7 192 aaKnown RBP19.79■□□□□ 0.76
LIME1-208ENST00000493265 NFIBO00712 420 aa19.78■□□□□ 0.76
LIME1-208ENST00000493265 SLC25A27O95847 323 aa19.78■□□□□ 0.76
LIME1-208ENST00000493265 TRIM29Q14134 588 aa19.78■□□□□ 0.76
LIME1-208ENST00000493265 NSMFQ6X4W1 530 aa19.78■□□□□ 0.76
LIME1-208ENST00000493265 PNMA2Q9UL42 364 aa19.78■□□□□ 0.76
LIME1-208ENST00000493265 KCNJ14Q9UNX9 436 aa19.78■□□□□ 0.76
LIME1-208ENST00000493265 KIF3AQ9Y496 699 aa19.78■□□□□ 0.76
LIME1-208ENST00000493265 SMCO2A6NFE2 343 aa19.77■□□□□ 0.76
LIME1-208ENST00000493265 hCG_1984214I3L0E3 225 aa19.77■□□□□ 0.76
LIME1-208ENST00000493265 XBP1P17861 261 aa19.77■□□□□ 0.76
LIME1-208ENST00000493265 NLRP5P59047 1200 aa19.77■□□□□ 0.76
LIME1-208ENST00000493265 TKFCQ3LXA3 575 aa19.77■□□□□ 0.76
LIME1-208ENST00000493265 ZNF713Q8N859 430 aaPredicted RBP19.77■□□□□ 0.76
LIME1-208ENST00000493265 SHISA4Q96DD7 197 aa19.77■□□□□ 0.76
LIME1-208ENST00000493265 C8orf76Q96K31 380 aa19.77■□□□□ 0.76
LIME1-208ENST00000493265 ACAD9Q9H845 621 aa19.77■□□□□ 0.76
LIME1-208ENST00000493265 SMCHD1A6NHR9 2005 aa19.76■□□□□ 0.75
LIME1-208ENST00000493265 CFBP00751 764 aa19.76■□□□□ 0.75
LIME1-208ENST00000493265 LARP1BQ659C4 914 aaKnown RBP19.76■□□□□ 0.75
LIME1-208ENST00000493265 CHST13Q8NET6 341 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms