RNA–Protein interactions for RNA: ENST00000493256.1

LYSMD4-208, Transcript of LysM domain containing 4, humanhuman

TSL 3

Gene LYSMD4, Length 880 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-208ENST00000493256 LCTP09848 1927 aa26.1■■□□□ 1.77
LYSMD4-208ENST00000493256 GJA9P57773 515 aa26.1■■□□□ 1.77
LYSMD4-208ENST00000493256 SHHQ15465 462 aa26.1■■□□□ 1.77
LYSMD4-208ENST00000493256 C9orf50Q5SZB4 431 aa26.1■■□□□ 1.77
LYSMD4-208ENST00000493256 SPC25Q9HBM1 224 aa26.1■■□□□ 1.77
LYSMD4-208ENST00000493256 DDX49Q9Y6V7 483 aaKnown RBP26.1■■□□□ 1.77
LYSMD4-208ENST00000493256 NEDD4P46934 1319 aa26.1■■□□□ 1.77
LYSMD4-208ENST00000493256 LAMA4Q16363 1823 aa26.09■■□□□ 1.77
LYSMD4-208ENST00000493256 ASB14A6NK59 587 aa26.09■■□□□ 1.77
LYSMD4-208ENST00000493256 KIAA0355O15063 1070 aa26.09■■□□□ 1.77
LYSMD4-208ENST00000493256 PDHBP11177 359 aa26.09■■□□□ 1.77
LYSMD4-208ENST00000493256 CWC27Q6UX04 472 aaKnown RBP26.09■■□□□ 1.77
LYSMD4-208ENST00000493256 NSMFQ6X4W1 530 aa26.09■■□□□ 1.77
LYSMD4-208ENST00000493256 ANKRD33Q7Z3H0 272 aa26.09■■□□□ 1.77
LYSMD4-208ENST00000493256 RNF41Q9H4P4 317 aaPredicted RBP26.09■■□□□ 1.77
LYSMD4-208ENST00000493256 DIAPH3Q9NSV4 1193 aa26.09■■□□□ 1.77
LYSMD4-208ENST00000493256 MTMR10Q9NXD2 777 aa26.09■■□□□ 1.77
LYSMD4-208ENST00000493256 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.08■■□□□ 1.77
LYSMD4-208ENST00000493256 ASGR1P07306 291 aa26.08■■□□□ 1.77
LYSMD4-208ENST00000493256 PCSK9Q8NBP7 692 aaKnown RBP26.08■■□□□ 1.77
LYSMD4-208ENST00000493256 TTC14Q96N46 770 aa26.08■■□□□ 1.77
LYSMD4-208ENST00000493256 TOX2Q96NM4 488 aa26.08■■□□□ 1.77
LYSMD4-208ENST00000493256 CTAGE5O15320 804 aa26.07■■□□□ 1.76
LYSMD4-208ENST00000493256 TNFAIP2Q03169 654 aa26.07■■□□□ 1.76
LYSMD4-208ENST00000493256 FAAP100Q0VG06 881 aa26.07■■□□□ 1.76
LYSMD4-208ENST00000493256 GNASQ5JWF2 1037 aa26.07■■□□□ 1.76
LYSMD4-208ENST00000493256 GLT1D1Q96MS3 346 aa26.07■■□□□ 1.76
LYSMD4-208ENST00000493256 TMEM39AQ9NV64 488 aa26.07■■□□□ 1.76
LYSMD4-208ENST00000493256 ELP1O95163 1332 aa26.07■■□□□ 1.76
LYSMD4-208ENST00000493256 DCDC2CA8MYV0 355 aa26.06■■□□□ 1.76
LYSMD4-208ENST00000493256 ZNF213O14771 459 aa26.06■■□□□ 1.76
LYSMD4-208ENST00000493256 NKX3-2P78367 333 aa26.06■■□□□ 1.76
LYSMD4-208ENST00000493256 ZNF543Q08ER8 600 aa26.06■■□□□ 1.76
LYSMD4-208ENST00000493256 ESR2Q92731 530 aa26.06■■□□□ 1.76
LYSMD4-208ENST00000493256 PURBQ96QR8 312 aaKnown RBP26.06■■□□□ 1.76
LYSMD4-208ENST00000493256 HIP1O00291 1037 aa26.05■■□□□ 1.76
LYSMD4-208ENST00000493256 NFIBO00712 420 aa26.05■■□□□ 1.76
LYSMD4-208ENST00000493256 SNHG28P0DPA3 235 aa26.05■■□□□ 1.76
LYSMD4-208ENST00000493256 RAG1P15918 1043 aa26.05■■□□□ 1.76
LYSMD4-208ENST00000493256 NOL8Q76FK4 1167 aaKnown RBP26.05■■□□□ 1.76
LYSMD4-208ENST00000493256 ZKSCAN3Q9BRR0 538 aa26.05■■□□□ 1.76
LYSMD4-208ENST00000493256 GNEQ9Y223 722 aaKnown RBP26.05■■□□□ 1.76
LYSMD4-208ENST00000493256 PTGS1P23219 599 aa26.04■■□□□ 1.76
LYSMD4-208ENST00000493256 CDK7P50613 346 aa26.04■■□□□ 1.76
LYSMD4-208ENST00000493256 BEX3Q00994 111 aa26.04■■□□□ 1.76
LYSMD4-208ENST00000493256 BAATQ14032 418 aaPredicted RBP26.04■■□□□ 1.76
LYSMD4-208ENST00000493256 EEPD1Q7L9B9 569 aa26.04■■□□□ 1.76
LYSMD4-208ENST00000493256 FBXO16Q8IX29 292 aaPredicted RBP26.04■■□□□ 1.76
LYSMD4-208ENST00000493256 VTI1AQ96AJ9 217 aa26.04■■□□□ 1.76
LYSMD4-208ENST00000493256 PDGFCQ9NRA1 345 aa26.04■■□□□ 1.76
LYSMD4-208ENST00000493256 SMPD1P17405 629 aa26.03■■□□□ 1.76
LYSMD4-208ENST00000493256 EPHB4P54760 987 aa26.03■■□□□ 1.76
LYSMD4-208ENST00000493256 FAM109BQ6ICB4 259 aaPredicted RBP26.03■■□□□ 1.76
LYSMD4-208ENST00000493256 TAPT1Q6NXT6 567 aa26.03■■□□□ 1.76
LYSMD4-208ENST00000493256 TLK2Q86UE8 772 aa26.03■■□□□ 1.76
LYSMD4-208ENST00000493256 MORC4Q8TE76 937 aa26.03■■□□□ 1.76
LYSMD4-208ENST00000493256 DSCC1Q9BVC3 393 aa26.03■■□□□ 1.76
LYSMD4-208ENST00000493256 STXBP5LQ9Y2K9 1186 aa26.03■■□□□ 1.76
LYSMD4-208ENST00000493256 SUPT16HQ9Y5B9 1047 aaKnown RBP26.03■■□□□ 1.76
LYSMD4-208ENST00000493256 A0A0U1RQG5 324 aaPredicted RBP26.02■■□□□ 1.76
LYSMD4-208ENST00000493256 DGKHQ86XP1 1220 aa26.02■■□□□ 1.76
LYSMD4-208ENST00000493256 CLEC4DQ8WXI8 215 aa26.02■■□□□ 1.76
LYSMD4-208ENST00000493256 TBX21Q9UL17 535 aa26.02■■□□□ 1.76
LYSMD4-208ENST00000493256 MROH7Q68CQ1 1323 aa26.02■■□□□ 1.76
LYSMD4-208ENST00000493256 ARVCFO00192 962 aa26.01■■□□□ 1.75
LYSMD4-208ENST00000493256 KDM4AO75164 1064 aa26.01■■□□□ 1.75
LYSMD4-208ENST00000493256 FPGSQ05932 587 aa26.01■■□□□ 1.75
LYSMD4-208ENST00000493256 TMEM63BQ5T3F8 832 aa26.01■■□□□ 1.75
LYSMD4-208ENST00000493256 IQSEC1Q6DN90 963 aa26.01■■□□□ 1.75
LYSMD4-208ENST00000493256 SLC30A10Q6XR72 485 aa26.01■■□□□ 1.75
LYSMD4-208ENST00000493256 VTA1Q9NP79 307 aa26.01■■□□□ 1.75
LYSMD4-208ENST00000493256 WDR19Q8NEZ3 1342 aa26■■□□□ 1.75
LYSMD4-208ENST00000493256 PTPDC1A2A3K4 754 aa26■■□□□ 1.75
LYSMD4-208ENST00000493256 B4E1Z4 1266 aa26■■□□□ 1.75
LYSMD4-208ENST00000493256 GOLGA8HP0CJ92 632 aa26■■□□□ 1.75
LYSMD4-208ENST00000493256 PDE4AP27815 886 aa26■■□□□ 1.75
LYSMD4-208ENST00000493256 NT5C2P49902 561 aa26■■□□□ 1.75
LYSMD4-208ENST00000493256 ALDH5A1P51649 535 aaPredicted RBP26■■□□□ 1.75
LYSMD4-208ENST00000493256 GPATCH4Q5T3I0 446 aaKnown RBP26■■□□□ 1.75
LYSMD4-208ENST00000493256 SLC17A8Q8NDX2 589 aa26■■□□□ 1.75
LYSMD4-208ENST00000493256 AP5M1Q9H0R1 490 aa26■■□□□ 1.75
LYSMD4-208ENST00000493256 IL25Q9H293 177 aa26■■□□□ 1.75
LYSMD4-208ENST00000493256 ADD3Q9UEY8 706 aaKnown RBP26■■□□□ 1.75
LYSMD4-208ENST00000493256 PNMA2Q9UL42 364 aa26■■□□□ 1.75
LYSMD4-208ENST00000493256 DYNC1LI2O43237 492 aaPredicted RBP25.99■■□□□ 1.75
LYSMD4-208ENST00000493256 TIMP1P01033 207 aa25.99■■□□□ 1.75
LYSMD4-208ENST00000493256 FSCN1Q16658 493 aaKnown RBP25.99■■□□□ 1.75
LYSMD4-208ENST00000493256 CXCL17Q6UXB2 119 aa25.99■■□□□ 1.75
LYSMD4-208ENST00000493256 IQCA1Q86XH1 822 aa25.99■■□□□ 1.75
LYSMD4-208ENST00000493256 FAM126BQ8IXS8 530 aa25.99■■□□□ 1.75
LYSMD4-208ENST00000493256 PNMA1Q8ND90 353 aa25.99■■□□□ 1.75
LYSMD4-208ENST00000493256 FAM161BQ96MY7 647 aa25.99■■□□□ 1.75
LYSMD4-208ENST00000493256 IMMTQ16891 758 aaKnown RBP25.98■■□□□ 1.75
LYSMD4-208ENST00000493256 CCDC178Q5BJE1 867 aa25.98■■□□□ 1.75
LYSMD4-208ENST00000493256 RNPC3Q96LT9 517 aaKnown RBP25.98■■□□□ 1.75
LYSMD4-208ENST00000493256 GUCD1Q96NT3 240 aa25.98■■□□□ 1.75
LYSMD4-208ENST00000493256 UBA5Q9GZZ9 404 aa25.98■■□□□ 1.75
LYSMD4-208ENST00000493256 CPVLQ9H3G5 476 aa25.98■■□□□ 1.75
LYSMD4-208ENST00000493256 Q9Y3F1 56 aa25.98■■□□□ 1.75
LYSMD4-208ENST00000493256 LOC102724159A0A0B4J2E5 919 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms