RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 ARGLU1Q9NWB6 273 aaPredicted RBP4.78□□□□□ -1.64
BRCA1-220ENST00000492859 SPATA7Q9P0W8 599 aa4.78□□□□□ -1.64
BRCA1-220ENST00000492859 POGKQ9P215 609 aa4.78□□□□□ -1.64
BRCA1-220ENST00000492859 AGTPBP1Q9UPW5 1226 aa4.78□□□□□ -1.64
BRCA1-220ENST00000492859 EFR3BQ9Y2G0 817 aa4.78□□□□□ -1.64
BRCA1-220ENST00000492859 MTF2Q9Y483 593 aaPredicted RBP4.78□□□□□ -1.64
BRCA1-220ENST00000492859 M0R3H8 397 aa4.77□□□□□ -1.65
BRCA1-220ENST00000492859 NCAM2O15394 837 aa4.77□□□□□ -1.65
BRCA1-220ENST00000492859 HOXC11O43248 304 aaPredicted RBP4.77□□□□□ -1.65
BRCA1-220ENST00000492859 XPOTO43592 962 aaKnown RBP4.77□□□□□ -1.65
BRCA1-220ENST00000492859 TLR5O60602 858 aa4.77□□□□□ -1.65
BRCA1-220ENST00000492859 CDKL5O76039 1030 aa4.77□□□□□ -1.65
BRCA1-220ENST00000492859 MT-ND3P03897 115 aa4.77□□□□□ -1.65
BRCA1-220ENST00000492859 DNTTP04053 509 aa4.77□□□□□ -1.65
BRCA1-220ENST00000492859 CHKAP35790 457 aa4.77□□□□□ -1.65
BRCA1-220ENST00000492859 TM4SF4P48230 202 aa4.77□□□□□ -1.65
BRCA1-220ENST00000492859 RRP1P56182 461 aaKnown RBP4.77□□□□□ -1.65
BRCA1-220ENST00000492859 MLLT1Q03111 559 aaPredicted RBP4.77□□□□□ -1.65
BRCA1-220ENST00000492859 RASGRF1Q13972 1273 aa4.77□□□□□ -1.65
BRCA1-220ENST00000492859 GBX1Q14549 363 aa4.77□□□□□ -1.65
BRCA1-220ENST00000492859 RABEP1Q15276 862 aa4.77□□□□□ -1.65
BRCA1-220ENST00000492859 ASIC2Q16515 512 aa4.77□□□□□ -1.65
BRCA1-220ENST00000492859 CCNG2Q16589 344 aa4.77□□□□□ -1.65
BRCA1-220ENST00000492859 MUM1L1Q5H9M0 696 aa4.77□□□□□ -1.65
BRCA1-220ENST00000492859 PLA2G2CQ5R387 149 aa4.77□□□□□ -1.65
BRCA1-220ENST00000492859 TTC39AQ5SRH9 613 aa4.77□□□□□ -1.65
BRCA1-220ENST00000492859 SLC6A19Q695T7 634 aa4.77□□□□□ -1.65
BRCA1-220ENST00000492859 CYB5RLQ6IPT4 315 aa4.77□□□□□ -1.65
BRCA1-220ENST00000492859 KDELC1Q6UW63 502 aa4.77□□□□□ -1.65
BRCA1-220ENST00000492859 OLFML1Q6UWY5 402 aa4.77□□□□□ -1.65
BRCA1-220ENST00000492859 RUFY3Q7L099 469 aa4.77□□□□□ -1.65
BRCA1-220ENST00000492859 ENOSF1Q7L5Y1 443 aa4.77□□□□□ -1.65
BRCA1-220ENST00000492859 ZER1Q7Z7L7 766 aa4.77□□□□□ -1.65
BRCA1-220ENST00000492859 IQCA1Q86XH1 822 aa4.77□□□□□ -1.65
BRCA1-220ENST00000492859 DZIP1Q86YF9 867 aaKnown RBP4.77□□□□□ -1.65
BRCA1-220ENST00000492859 SLC41A1Q8IVJ1 513 aa4.77□□□□□ -1.65
BRCA1-220ENST00000492859 SCUBE3Q8IX30 993 aa4.77□□□□□ -1.65
BRCA1-220ENST00000492859 PEX5LQ8IYB4 626 aa4.77□□□□□ -1.65
BRCA1-220ENST00000492859 FAM186BQ8IYM0 893 aa4.77□□□□□ -1.65
BRCA1-220ENST00000492859 TBC1D21Q8IYX1 336 aa4.77□□□□□ -1.65
BRCA1-220ENST00000492859 ZNF540Q8NDQ6 660 aa4.77□□□□□ -1.65
BRCA1-220ENST00000492859 KCNN1Q92952 543 aa4.77□□□□□ -1.65
BRCA1-220ENST00000492859 TNPO1Q92973 898 aaKnown RBP4.77□□□□□ -1.65
BRCA1-220ENST00000492859 NINJ1Q92982 152 aa4.77□□□□□ -1.65
BRCA1-220ENST00000492859 DDX11Q96FC9 970 aa4.77□□□□□ -1.65
BRCA1-220ENST00000492859 DHTKD1Q96HY7 919 aaPredicted RBP4.77□□□□□ -1.65
BRCA1-220ENST00000492859 RBM14Q96PK6 669 aaKnown RBP4.77□□□□□ -1.65
BRCA1-220ENST00000492859 TACO1Q9BSH4 297 aaKnown RBP4.77□□□□□ -1.65
BRCA1-220ENST00000492859 TTPALQ9BTX7 342 aa4.77□□□□□ -1.65
BRCA1-220ENST00000492859 UTP14AQ9BVJ6 771 aaKnown RBP4.77□□□□□ -1.65
BRCA1-220ENST00000492859 LRRCC1Q9C099 1032 aa4.77□□□□□ -1.65
BRCA1-220ENST00000492859 CCDC68Q9H2F9 335 aa4.77□□□□□ -1.65
BRCA1-220ENST00000492859 SENP2Q9HC62 589 aa4.77□□□□□ -1.65
BRCA1-220ENST00000492859 ST7Q9NRC1 585 aa4.77□□□□□ -1.65
BRCA1-220ENST00000492859 DISC1Q9NRI5 854 aa4.77□□□□□ -1.65
BRCA1-220ENST00000492859 HECAQ9UBI9 543 aaPredicted RBP4.77□□□□□ -1.65
BRCA1-220ENST00000492859 MTRRQ9UBK8 725 aa4.77□□□□□ -1.65
BRCA1-220ENST00000492859 DKK3Q9UBP4 350 aa4.77□□□□□ -1.65
BRCA1-220ENST00000492859 PRKAG3Q9UGI9 489 aa4.77□□□□□ -1.65
BRCA1-220ENST00000492859 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.77□□□□□ -1.65
BRCA1-220ENST00000492859 DDX20Q9UHI6 824 aaKnown RBP4.77□□□□□ -1.65
BRCA1-220ENST00000492859 DUSP12Q9UNI6 340 aa4.77□□□□□ -1.65
BRCA1-220ENST00000492859 PHLDB1Q86UU1 1377 aa4.77□□□□□ -1.65
BRCA1-220ENST00000492859 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.77□□□□□ -1.65
BRCA1-220ENST00000492859 PNMA6FA0A0J9YX94 578 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 GOLGA6L10A0A0M3HER8 536 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 C17orf113A0A1B0GUU1 675 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 SFI1A8K8P3 1242 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 H0YC42 278 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 MCF2LO15068 1137 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 DDX3YO15523 660 aaKnown RBP4.76□□□□□ -1.65
BRCA1-220ENST00000492859 PPP1R12BO60237 982 aaPredicted RBP4.76□□□□□ -1.65
BRCA1-220ENST00000492859 ADAMTS4O75173 837 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 TADA3O75528 432 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 SNX4O95219 450 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 SMC2O95347 1197 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 MYBL2P10244 700 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 P4HA1P13674 534 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 MX2P20592 715 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 GUCY2CP25092 1073 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 MATR3P43243 847 aaKnown RBP eCLIP4.76□□□□□ -1.65
BRCA1-220ENST00000492859 CENPAP49450 140 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 SLC12A2P55011 1212 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 EVCP57679 992 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 PPP2R5DQ14738 602 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 PSMD6Q15008 389 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 SLC14A2Q15849 920 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 CNGA3Q16281 694 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 ANKDD1AQ495B1 522 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 KMT5BQ4FZB7 885 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 CAVIN4Q5BKX8 364 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 PERM1Q5SV97 790 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 ALG1LQ6GMV1 187 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 ITPRIPL1Q6GPH6 555 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 CNSTQ6PJW8 725 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 MTHFD1LQ6UB35 978 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 CCDC80Q76M96 950 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 RALYLQ86SE5 291 aaKnown RBP4.76□□□□□ -1.65
BRCA1-220ENST00000492859 TMEM110Q86TL2 294 aa4.76□□□□□ -1.65
BRCA1-220ENST00000492859 KRT222Q8N1A0 295 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms