RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 CNTN2Q02246 1040 aa13.1□□□□□ -0.31
SND1-215ENST00000492772 ITGA7Q13683 1181 aa13.1□□□□□ -0.31
SND1-215ENST00000492772 ADGRE1Q14246 886 aa13.1□□□□□ -0.31
SND1-215ENST00000492772 PPP4R3BQ5MIZ7 849 aa13.1□□□□□ -0.31
SND1-215ENST00000492772 SLFN13Q68D06 897 aa13.1□□□□□ -0.31
SND1-215ENST00000492772 CHURC1Q8WUH1 139 aa13.1□□□□□ -0.31
SND1-215ENST00000492772 OSBP2Q969R2 916 aa13.1□□□□□ -0.31
SND1-215ENST00000492772 GMCL1Q96IK5 515 aa13.1□□□□□ -0.31
SND1-215ENST00000492772 UHRF1Q96T88 793 aaPredicted RBP13.1□□□□□ -0.31
SND1-215ENST00000492772 NOC4LQ9BVI4 516 aaKnown RBP13.1□□□□□ -0.31
SND1-215ENST00000492772 CXXC1Q9P0U4 656 aaPredicted RBP13.1□□□□□ -0.31
SND1-215ENST00000492772 GNEQ9Y223 722 aaKnown RBP13.1□□□□□ -0.31
SND1-215ENST00000492772 LCTP09848 1927 aa13.09□□□□□ -0.31
SND1-215ENST00000492772 TRANK1O15050 2925 aa13.09□□□□□ -0.31
SND1-215ENST00000492772 RNF113AO15541 343 aaKnown RBP13.09□□□□□ -0.31
SND1-215ENST00000492772 APPP05067 770 aa13.09□□□□□ -0.31
SND1-215ENST00000492772 SLC3A2P08195 630 aaKnown RBP13.09□□□□□ -0.31
SND1-215ENST00000492772 PDE4BQ07343 736 aa13.09□□□□□ -0.31
SND1-215ENST00000492772 IKQ13123 557 aaPredicted RBP13.09□□□□□ -0.31
SND1-215ENST00000492772 CCDC85BQ15834 202 aaPredicted RBP13.09□□□□□ -0.31
SND1-215ENST00000492772 LRRFIP1Q32MZ4 808 aaKnown RBP13.09□□□□□ -0.31
SND1-215ENST00000492772 PPP2R2DQ66LE6 453 aa13.09□□□□□ -0.31
SND1-215ENST00000492772 RPUSD2Q8IZ73 545 aaKnown RBP13.09□□□□□ -0.31
SND1-215ENST00000492772 NEDD1Q8NHV4 660 aa13.09□□□□□ -0.31
SND1-215ENST00000492772 NACAP1Q9BZK3 213 aa13.09□□□□□ -0.31
SND1-215ENST00000492772 YBX2Q9Y2T7 364 aaKnown RBP13.09□□□□□ -0.31
SND1-215ENST00000492772 Q9Y3F1 56 aa13.09□□□□□ -0.31
SND1-215ENST00000492772 PCDHA11Q9Y5I1 949 aa13.09□□□□□ -0.31
SND1-215ENST00000492772 SLC4A7Q9Y6M7 1214 aa13.09□□□□□ -0.31
SND1-215ENST00000492772 UMODL1Q5DID0 1318 aa13.09□□□□□ -0.31
SND1-215ENST00000492772 NCOR1O75376 2440 aa13.08□□□□□ -0.32
SND1-215ENST00000492772 SOWAHBA6NEL2 793 aa13.08□□□□□ -0.32
SND1-215ENST00000492772 SMARCA5O60264 1052 aaPredicted RBP13.08□□□□□ -0.32
SND1-215ENST00000492772 PLA2G6O60733 806 aa13.08□□□□□ -0.32
SND1-215ENST00000492772 PFKMP08237 780 aa13.08□□□□□ -0.32
SND1-215ENST00000492772 SLC1A4P43007 532 aa13.08□□□□□ -0.32
SND1-215ENST00000492772 OTOP2Q7RTS6 562 aa13.08□□□□□ -0.32
SND1-215ENST00000492772 STAG1Q8WVM7 1258 aa13.08□□□□□ -0.32
SND1-215ENST00000492772 AGBL1Q96MI9 1066 aa13.08□□□□□ -0.32
SND1-215ENST00000492772 TRERF1Q96PN7 1200 aa13.08□□□□□ -0.32
SND1-215ENST00000492772 WNT8AQ9H1J5 351 aa13.08□□□□□ -0.32
SND1-215ENST00000492772 MYO9BQ13459 2157 aa13.08□□□□□ -0.32
SND1-215ENST00000492772 ZNF536O15090 1300 aa13.08□□□□□ -0.32
SND1-215ENST00000492772 TANC1Q9C0D5 1861 aa13.08□□□□□ -0.32
SND1-215ENST00000492772 PATL2C9JE40 543 aaKnown RBP13.07□□□□□ -0.32
SND1-215ENST00000492772 M0R2C6 588 aa13.07□□□□□ -0.32
SND1-215ENST00000492772 DYNC1LI2O43237 492 aaPredicted RBP13.07□□□□□ -0.32
SND1-215ENST00000492772 B4GALT4O60513 344 aa13.07□□□□□ -0.32
SND1-215ENST00000492772 ALAS1P13196 640 aa13.07□□□□□ -0.32
SND1-215ENST00000492772 SMPD1P17405 629 aa13.07□□□□□ -0.32
SND1-215ENST00000492772 CCL23P55773 120 aa13.07□□□□□ -0.32
SND1-215ENST00000492772 IQSEC1Q6DN90 963 aa13.07□□□□□ -0.32
SND1-215ENST00000492772 FBXO16Q8IX29 292 aaPredicted RBP13.07□□□□□ -0.32
SND1-215ENST00000492772 IFNL3Q8IZI9 196 aa13.07□□□□□ -0.32
SND1-215ENST00000492772 TRPV6Q9H1D0 765 aa13.07□□□□□ -0.32
SND1-215ENST00000492772 VTA1Q9NP79 307 aa13.07□□□□□ -0.32
SND1-215ENST00000492772 GRIN2DO15399 1336 aa13.07□□□□□ -0.32
SND1-215ENST00000492772 REV3LO60673 3130 aa13.06□□□□□ -0.32
SND1-215ENST00000492772 ZBBXA8MT70 800 aa13.06□□□□□ -0.32
SND1-215ENST00000492772 SUPT20HL2P0C7V6 817 aa13.06□□□□□ -0.32
SND1-215ENST00000492772 ATP2A2P16615 1042 aaKnown RBP13.06□□□□□ -0.32
SND1-215ENST00000492772 TFAP4Q01664 338 aa13.06□□□□□ -0.32
SND1-215ENST00000492772 AAK1Q2M2I8 961 aa13.06□□□□□ -0.32
SND1-215ENST00000492772 NAPBQ9H115 298 aa13.06□□□□□ -0.32
SND1-215ENST00000492772 ALDH8A1Q9H2A2 487 aaPredicted RBP13.06□□□□□ -0.32
SND1-215ENST00000492772 POLR3EQ9NVU0 708 aa13.06□□□□□ -0.32
SND1-215ENST00000492772 CYP39A1Q9NYL5 469 aa13.06□□□□□ -0.32
SND1-215ENST00000492772 LOC102724159A0A0B4J2E5 919 aa13.05□□□□□ -0.32
SND1-215ENST00000492772 RABGGTBP53611 331 aa13.05□□□□□ -0.32
SND1-215ENST00000492772 PSMC6P62333 389 aa13.05□□□□□ -0.32
SND1-215ENST00000492772 PPARAQ07869 468 aa13.05□□□□□ -0.32
SND1-215ENST00000492772 PWP2Q15269 919 aaKnown RBP13.05□□□□□ -0.32
SND1-215ENST00000492772 TAPT1Q6NXT6 567 aa13.05□□□□□ -0.32
SND1-215ENST00000492772 MICALL1Q8N3F8 863 aa13.05□□□□□ -0.32
SND1-215ENST00000492772 MORC4Q8TE76 937 aa13.05□□□□□ -0.32
SND1-215ENST00000492772 PDGFCQ9NRA1 345 aa13.05□□□□□ -0.32
SND1-215ENST00000492772 ADD3Q9UEY8 706 aaKnown RBP13.05□□□□□ -0.32
SND1-215ENST00000492772 CCPG1Q9ULG6 757 aa13.05□□□□□ -0.32
SND1-215ENST00000492772 STX8Q9UNK0 236 aa13.05□□□□□ -0.32
SND1-215ENST00000492772 ACTN1P12814 892 aa13.04□□□□□ -0.32
SND1-215ENST00000492772 MCCP23508 829 aa13.04□□□□□ -0.32
SND1-215ENST00000492772 RFC2P35250 354 aa13.04□□□□□ -0.32
SND1-215ENST00000492772 PLA2G5P39877 138 aa13.04□□□□□ -0.32
SND1-215ENST00000492772 CPT1AP50416 773 aa13.04□□□□□ -0.32
SND1-215ENST00000492772 DUSP28Q4G0W2 176 aa13.04□□□□□ -0.32
SND1-215ENST00000492772 MUM1L1Q5H9M0 696 aa13.04□□□□□ -0.32
SND1-215ENST00000492772 TSHZ3Q63HK5 1081 aa13.04□□□□□ -0.32
SND1-215ENST00000492772 RCSD1Q6JBY9 416 aa13.04□□□□□ -0.32
SND1-215ENST00000492772 NSMFQ6X4W1 530 aa13.04□□□□□ -0.32
SND1-215ENST00000492772 KIAA1211Q6ZU35 1233 aa13.04□□□□□ -0.32
SND1-215ENST00000492772 KCTD1Q719H9 257 aa13.04□□□□□ -0.32
SND1-215ENST00000492772 EEPD1Q7L9B9 569 aa13.04□□□□□ -0.32
SND1-215ENST00000492772 SCLYQ96I15 445 aa13.04□□□□□ -0.32
SND1-215ENST00000492772 C1QTNF1Q9BXJ1 281 aa13.04□□□□□ -0.32
SND1-215ENST00000492772 PRR12Q9ULL5 1215 aa13.04□□□□□ -0.32
SND1-215ENST00000492772 TNKSO95271 1327 aa13.04□□□□□ -0.32
SND1-215ENST00000492772 XIRP2A4UGR9 3374 aa13.04□□□□□ -0.32
SND1-215ENST00000492772 SCN5AQ14524 2016 aa13.03□□□□□ -0.32
SND1-215ENST00000492772 TSPY2A6NKD2 308 aa13.03□□□□□ -0.32
SND1-215ENST00000492772 GTPBP6O43824 516 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms