RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 CLIP2Q9UDT6 1046 aa15.64■□□□□ 0.09
HDAC3-213ENST00000492506 FBXO40Q9UH90 709 aa15.64■□□□□ 0.09
HDAC3-213ENST00000492506 SOWAHBA6NEL2 793 aa15.63■□□□□ 0.09
HDAC3-213ENST00000492506 RAB11FIP3O75154 756 aa15.63■□□□□ 0.09
HDAC3-213ENST00000492506 MYOGP15173 224 aa15.63■□□□□ 0.09
HDAC3-213ENST00000492506 PDE4AP27815 886 aa15.63■□□□□ 0.09
HDAC3-213ENST00000492506 RABGGTBP53611 331 aa15.63■□□□□ 0.09
HDAC3-213ENST00000492506 TNFAIP2Q03169 654 aa15.63■□□□□ 0.09
HDAC3-213ENST00000492506 STK11IPQ8N1F8 1099 aa15.63■□□□□ 0.09
HDAC3-213ENST00000492506 ZMYND15Q9H091 742 aa15.63■□□□□ 0.09
HDAC3-213ENST00000492506 FEM1BQ9UK73 627 aa15.63■□□□□ 0.09
HDAC3-213ENST00000492506 CABYRO75952 493 aa15.62■□□□□ 0.09
HDAC3-213ENST00000492506 CCL23P55773 120 aa15.62■□□□□ 0.09
HDAC3-213ENST00000492506 TFF2Q03403 129 aa15.62■□□□□ 0.09
HDAC3-213ENST00000492506 ITGA7Q13683 1181 aa15.62■□□□□ 0.09
HDAC3-213ENST00000492506 NFKBIBQ15653 356 aa15.62■□□□□ 0.09
HDAC3-213ENST00000492506 GIMAP6Q6P9H5 292 aa15.62■□□□□ 0.09
HDAC3-213ENST00000492506 GMCL1P1Q8NEA9 526 aa15.62■□□□□ 0.09
HDAC3-213ENST00000492506 CEP95Q96GE4 821 aa15.62■□□□□ 0.09
HDAC3-213ENST00000492506 TRPV6Q9H1D0 765 aa15.62■□□□□ 0.09
HDAC3-213ENST00000492506 MTIF3Q9H2K0 278 aaKnown RBP15.62■□□□□ 0.09
HDAC3-213ENST00000492506 MKNK2Q9HBH9 465 aa15.62■□□□□ 0.09
HDAC3-213ENST00000492506 A1CFQ9NQ94 594 aaKnown RBP15.62■□□□□ 0.09
HDAC3-213ENST00000492506 DDX49Q9Y6V7 483 aaKnown RBP15.62■□□□□ 0.09
HDAC3-213ENST00000492506 PTPRSQ13332 1948 aa15.62■□□□□ 0.09
HDAC3-213ENST00000492506 ZNF536O15090 1300 aa15.62■□□□□ 0.09
HDAC3-213ENST00000492506 MINDY4BA8MYZ0 360 aa15.61■□□□□ 0.09
HDAC3-213ENST00000492506 B4GALT4O60513 344 aa15.61■□□□□ 0.09
HDAC3-213ENST00000492506 HSP90AA1P07900 732 aaKnown RBP15.61■□□□□ 0.09
HDAC3-213ENST00000492506 SMPD1P17405 629 aa15.61■□□□□ 0.09
HDAC3-213ENST00000492506 HSP90AA2PQ14568 343 aaPredicted RBP15.61■□□□□ 0.09
HDAC3-213ENST00000492506 FSCN1Q16658 493 aaKnown RBP15.61■□□□□ 0.09
HDAC3-213ENST00000492506 TMEM63BQ5T3F8 832 aa15.61■□□□□ 0.09
HDAC3-213ENST00000492506 ZSCAN25Q6NSZ9 544 aa15.61■□□□□ 0.09
HDAC3-213ENST00000492506 TLK2Q86UE8 772 aa15.61■□□□□ 0.09
HDAC3-213ENST00000492506 AGBL1Q96MI9 1066 aa15.61■□□□□ 0.09
HDAC3-213ENST00000492506 EPB41L4AQ9HCS5 686 aaPredicted RBP15.61■□□□□ 0.09
HDAC3-213ENST00000492506 HOMER2Q9NSB8 354 aa15.61■□□□□ 0.09
HDAC3-213ENST00000492506 ZBTB40Q9NUA8 1239 aa15.61■□□□□ 0.09
HDAC3-213ENST00000492506 MTMR4Q9NYA4 1195 aa15.61■□□□□ 0.09
HDAC3-213ENST00000492506 SYNPO2Q9UMS6 1093 aa15.61■□□□□ 0.09
HDAC3-213ENST00000492506 PCDHA11Q9Y5I1 949 aa15.61■□□□□ 0.09
HDAC3-213ENST00000492506 HMMRO75330 724 aa15.6■□□□□ 0.09
HDAC3-213ENST00000492506 POU3F3P20264 500 aaPredicted RBP15.6■□□□□ 0.09
HDAC3-213ENST00000492506 PPP2R2DQ66LE6 453 aa15.6■□□□□ 0.09
HDAC3-213ENST00000492506 TAPT1Q6NXT6 567 aa15.6■□□□□ 0.09
HDAC3-213ENST00000492506 LRRC47Q8N1G4 583 aaKnown RBP15.6■□□□□ 0.09
HDAC3-213ENST00000492506 TET1Q8NFU7 2136 aa15.6■□□□□ 0.09
HDAC3-213ENST00000492506 SEZ6LQ9BYH1 1024 aa15.6■□□□□ 0.09
HDAC3-213ENST00000492506 ACAD9Q9H845 621 aa15.6■□□□□ 0.09
HDAC3-213ENST00000492506 PDGFCQ9NRA1 345 aa15.6■□□□□ 0.09
HDAC3-213ENST00000492506 CTDP1Q9Y5B0 961 aaPredicted RBP15.6■□□□□ 0.09
HDAC3-213ENST00000492506 SLC4A7Q9Y6M7 1214 aa15.6■□□□□ 0.09
HDAC3-213ENST00000492506 TANC1Q9C0D5 1861 aa15.6■□□□□ 0.09
HDAC3-213ENST00000492506 SCN10AQ9Y5Y9 1956 aa15.6■□□□□ 0.09
HDAC3-213ENST00000492506 PRDM1O75626 825 aa15.59■□□□□ 0.09
HDAC3-213ENST00000492506 FDX1P10109 184 aa15.59■□□□□ 0.09
HDAC3-213ENST00000492506 BMP3P12645 472 aa15.59■□□□□ 0.09
HDAC3-213ENST00000492506 KCNQ1P51787 676 aa15.59■□□□□ 0.09
HDAC3-213ENST00000492506 PSMC6P62333 389 aa15.59■□□□□ 0.09
HDAC3-213ENST00000492506 NOL8Q76FK4 1167 aaKnown RBP15.59■□□□□ 0.09
HDAC3-213ENST00000492506 RPUSD2Q8IZ73 545 aaKnown RBP15.59■□□□□ 0.09
HDAC3-213ENST00000492506 OSBP2Q969R2 916 aa15.59■□□□□ 0.09
HDAC3-213ENST00000492506 FAM122AQ96E09 287 aa15.59■□□□□ 0.09
HDAC3-213ENST00000492506 SCLYQ96I15 445 aa15.59■□□□□ 0.09
HDAC3-213ENST00000492506 RNF146Q9NTX7 359 aa15.59■□□□□ 0.09
HDAC3-213ENST00000492506 PLIN4Q96Q06 1357 aa15.59■□□□□ 0.09
HDAC3-213ENST00000492506 BRWD1Q9NSI6 2320 aa15.59■□□□□ 0.09
HDAC3-213ENST00000492506 TRIP12Q14669 1992 aaPredicted RBP15.58■□□□□ 0.09
HDAC3-213ENST00000492506 ASB14A6NK59 587 aa15.58■□□□□ 0.08
HDAC3-213ENST00000492506 ERC2O15083 957 aa15.58■□□□□ 0.08
HDAC3-213ENST00000492506 DYNC1LI2O43237 492 aaPredicted RBP15.58■□□□□ 0.08
HDAC3-213ENST00000492506 TTLL1O95922 423 aa15.58■□□□□ 0.08
HDAC3-213ENST00000492506 TTLL4Q14679 1199 aa15.58■□□□□ 0.08
HDAC3-213ENST00000492506 SLFN13Q68D06 897 aa15.58■□□□□ 0.08
HDAC3-213ENST00000492506 IQSEC1Q6DN90 963 aa15.58■□□□□ 0.08
HDAC3-213ENST00000492506 AP5M1Q9H0R1 490 aa15.58■□□□□ 0.08
HDAC3-213ENST00000492506 TSPYL2Q9H2G4 693 aaPredicted RBP15.58■□□□□ 0.08
HDAC3-213ENST00000492506 Q9Y3F1 56 aa15.58■□□□□ 0.08
HDAC3-213ENST00000492506 MTCH2Q9Y6C9 303 aa15.58■□□□□ 0.08
HDAC3-213ENST00000492506 TMEM232C9JQI7 657 aa15.57■□□□□ 0.08
HDAC3-213ENST00000492506 RFXAPO00287 272 aa15.57■□□□□ 0.08
HDAC3-213ENST00000492506 ATP2A2P16615 1042 aaKnown RBP15.57■□□□□ 0.08
HDAC3-213ENST00000492506 HOXD11P31277 338 aaPredicted RBP15.57■□□□□ 0.08
HDAC3-213ENST00000492506 FBXO16Q8IX29 292 aaPredicted RBP15.57■□□□□ 0.08
HDAC3-213ENST00000492506 ZNF444Q8N0Y2 327 aaPredicted RBP15.57■□□□□ 0.08
HDAC3-213ENST00000492506 MICALL1Q8N3F8 863 aa15.57■□□□□ 0.08
HDAC3-213ENST00000492506 NEDD1Q8NHV4 660 aa15.57■□□□□ 0.08
HDAC3-213ENST00000492506 C1QTNF1Q9BXJ1 281 aa15.57■□□□□ 0.08
HDAC3-213ENST00000492506 ALDH8A1Q9H2A2 487 aaPredicted RBP15.57■□□□□ 0.08
HDAC3-213ENST00000492506 EPOPA6NHQ4 379 aa15.56■□□□□ 0.08
HDAC3-213ENST00000492506 STAT2P52630 851 aa15.56■□□□□ 0.08
HDAC3-213ENST00000492506 TKFCQ3LXA3 575 aa15.56■□□□□ 0.08
HDAC3-213ENST00000492506 MUM1L1Q5H9M0 696 aa15.56■□□□□ 0.08
HDAC3-213ENST00000492506 EEPD1Q7L9B9 569 aa15.56■□□□□ 0.08
HDAC3-213ENST00000492506 KBTBD3Q8NAB2 608 aa15.56■□□□□ 0.08
HDAC3-213ENST00000492506 MORC4Q8TE76 937 aa15.56■□□□□ 0.08
HDAC3-213ENST00000492506 STAG1Q8WVM7 1258 aa15.56■□□□□ 0.08
HDAC3-213ENST00000492506 APPBP2Q92624 585 aa15.56■□□□□ 0.08
HDAC3-213ENST00000492506 GMCL1Q96IK5 515 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms