RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 ADGRG1Q9Y653 693 aa14.01□□□□□ -0.17
HMGN1-220ENST00000492280 GAKO14976 1311 aa14.01□□□□□ -0.17
HMGN1-220ENST00000492280 PPP1R11O60927 126 aaPredicted RBP14□□□□□ -0.17
HMGN1-220ENST00000492280 CLCN6P51797 869 aa14□□□□□ -0.17
HMGN1-220ENST00000492280 SYCP1Q15431 976 aa14□□□□□ -0.17
HMGN1-220ENST00000492280 NEK8Q86SG6 692 aa14□□□□□ -0.17
HMGN1-220ENST00000492280 GLIS3Q8NEA6 775 aa14□□□□□ -0.17
HMGN1-220ENST00000492280 SPZ1Q9BXG8 430 aa14□□□□□ -0.17
HMGN1-220ENST00000492280 USP40Q9NVE5 1235 aa14□□□□□ -0.17
HMGN1-220ENST00000492280 ANKRD31Q8N7Z5 1873 aa14□□□□□ -0.17
HMGN1-220ENST00000492280 CCDC96Q2M329 555 aa14□□□□□ -0.17
HMGN1-220ENST00000492280 KRT27Q7Z3Y8 459 aa14□□□□□ -0.17
HMGN1-220ENST00000492280 ADSSL1Q8N142 457 aa14□□□□□ -0.17
HMGN1-220ENST00000492280 MMTAG2Q9BU76 263 aaKnown RBP14□□□□□ -0.17
HMGN1-220ENST00000492280 C6orf50Q9HD87 102 aa14□□□□□ -0.17
HMGN1-220ENST00000492280 MTMR4Q9NYA4 1195 aa14□□□□□ -0.17
HMGN1-220ENST00000492280 MORC2Q9Y6X9 1032 aaPredicted RBP14□□□□□ -0.17
HMGN1-220ENST00000492280 B4DLN1 442 aa13.99□□□□□ -0.17
HMGN1-220ENST00000492280 EDIL3O43854 480 aa13.99□□□□□ -0.17
HMGN1-220ENST00000492280 BBOX1O75936 387 aa13.99□□□□□ -0.17
HMGN1-220ENST00000492280 CCDC175P0C221 793 aa13.99□□□□□ -0.17
HMGN1-220ENST00000492280 KRT9P35527 623 aa13.99□□□□□ -0.17
HMGN1-220ENST00000492280 PDE4DQ08499 809 aa13.99□□□□□ -0.17
HMGN1-220ENST00000492280 DAGLBQ8NCG7 672 aa13.99□□□□□ -0.17
HMGN1-220ENST00000492280 SLC39A2Q9NP94 309 aa13.99□□□□□ -0.17
HMGN1-220ENST00000492280 ABHD10Q9NUJ1 306 aa13.99□□□□□ -0.17
HMGN1-220ENST00000492280 PUF60Q9UHX1 559 aaKnown RBP13.99□□□□□ -0.17
HMGN1-220ENST00000492280 ZHX1Q9UKY1 873 aaPredicted RBP13.99□□□□□ -0.17
HMGN1-220ENST00000492280 TADA3O75528 432 aa13.99□□□□□ -0.17
HMGN1-220ENST00000492280 ADRA2BP18089 450 aa13.99□□□□□ -0.17
HMGN1-220ENST00000492280 C15orf52Q6ZUT6 534 aaKnown RBP13.99□□□□□ -0.17
HMGN1-220ENST00000492280 UBXN4Q92575 508 aa13.99□□□□□ -0.17
HMGN1-220ENST00000492280 ZC3H12CQ9C0D7 883 aaKnown RBP13.99□□□□□ -0.17
HMGN1-220ENST00000492280 DDX41Q9UJV9 622 aaKnown RBP13.99□□□□□ -0.17
HMGN1-220ENST00000492280 BRWD3Q6RI45 1802 aa13.99□□□□□ -0.17
HMGN1-220ENST00000492280 TTC26A0AVF1 554 aa13.99□□□□□ -0.17
HMGN1-220ENST00000492280 CCP110O43303 1012 aa13.99□□□□□ -0.17
HMGN1-220ENST00000492280 ZSCAN20P17040 1043 aaPredicted RBP13.99□□□□□ -0.17
HMGN1-220ENST00000492280 MCM6Q14566 821 aa13.99□□□□□ -0.17
HMGN1-220ENST00000492280 ZNF622Q969S3 477 aaKnown RBP eCLIP13.99□□□□□ -0.17
HMGN1-220ENST00000492280 TRIM9Q9C026 710 aa13.99□□□□□ -0.17
HMGN1-220ENST00000492280 ZNF287Q9HBT7 754 aa13.99□□□□□ -0.17
HMGN1-220ENST00000492280 KBTBD4Q9NVX7 518 aa13.99□□□□□ -0.17
HMGN1-220ENST00000492280 LIMA1Q9UHB6 759 aaKnown RBP13.99□□□□□ -0.17
HMGN1-220ENST00000492280 USP17L10C9JJH3 530 aa13.98□□□□□ -0.17
HMGN1-220ENST00000492280 G3V3G9 751 aa13.98□□□□□ -0.17
HMGN1-220ENST00000492280 ZNF569Q5MCW4 686 aa13.98□□□□□ -0.17
HMGN1-220ENST00000492280 DCAF8Q5TAQ9 597 aa13.98□□□□□ -0.17
HMGN1-220ENST00000492280 KCNK18Q7Z418 384 aa13.98□□□□□ -0.17
HMGN1-220ENST00000492280 FCHSD1Q86WN1 690 aa13.98□□□□□ -0.17
HMGN1-220ENST00000492280 PANX2Q96RD6 677 aa13.98□□□□□ -0.17
HMGN1-220ENST00000492280 CTAGE1Q96RT6 745 aa13.98□□□□□ -0.17
HMGN1-220ENST00000492280 PODXL2Q9NZ53 605 aa13.98□□□□□ -0.17
HMGN1-220ENST00000492280 SMCHD1A6NHR9 2005 aa13.98□□□□□ -0.17
HMGN1-220ENST00000492280 MYH7BA7E2Y1 1941 aa13.98□□□□□ -0.17
HMGN1-220ENST00000492280 PLCG2P16885 1265 aa13.98□□□□□ -0.17
HMGN1-220ENST00000492280 SHMT1P34896 483 aa13.98□□□□□ -0.17
HMGN1-220ENST00000492280 RBM5P52756 815 aaKnown RBP eCLIP13.98□□□□□ -0.17
HMGN1-220ENST00000492280 CACNB1Q02641 598 aaPredicted RBP13.98□□□□□ -0.17
HMGN1-220ENST00000492280 PPP2R3AQ06190 1150 aa13.98□□□□□ -0.17
HMGN1-220ENST00000492280 RAD51AP2Q09MP3 1159 aa13.98□□□□□ -0.17
HMGN1-220ENST00000492280 CDC42EP5Q6NZY7 148 aa13.98□□□□□ -0.17
HMGN1-220ENST00000492280 KRT25Q7Z3Z0 450 aa13.98□□□□□ -0.17
HMGN1-220ENST00000492280 COL23A1Q86Y22 540 aaPredicted RBP13.98□□□□□ -0.17
HMGN1-220ENST00000492280 DNAJC18Q9H819 358 aa13.98□□□□□ -0.17
HMGN1-220ENST00000492280 RMND1Q9NWS8 449 aa13.98□□□□□ -0.17
HMGN1-220ENST00000492280 MYH4Q9Y623 1939 aa13.97□□□□□ -0.17
HMGN1-220ENST00000492280 GNA11P29992 359 aa13.97□□□□□ -0.17
HMGN1-220ENST00000492280 LRRC41Q15345 812 aa13.97□□□□□ -0.17
HMGN1-220ENST00000492280 ANKRD40Q6AI12 368 aa13.97□□□□□ -0.17
HMGN1-220ENST00000492280 ADGRF4Q8IZF3 695 aa13.97□□□□□ -0.17
HMGN1-220ENST00000492280 CSGALNACT2Q8N6G5 542 aa13.97□□□□□ -0.17
HMGN1-220ENST00000492280 KIAA0895Q8NCT3 520 aa13.97□□□□□ -0.17
HMGN1-220ENST00000492280 TBC1D22AQ8WUA7 517 aa13.97□□□□□ -0.17
HMGN1-220ENST00000492280 DUSP9Q99956 384 aaKnown RBP13.97□□□□□ -0.17
HMGN1-220ENST00000492280 JMJD4Q9H9V9 463 aa13.97□□□□□ -0.17
HMGN1-220ENST00000492280 SERPINB13Q9UIV8 391 aa13.97□□□□□ -0.17
HMGN1-220ENST00000492280 USP17L15C9J2P7 530 aa13.97□□□□□ -0.17
HMGN1-220ENST00000492280 USP17L13C9JLJ4 530 aa13.97□□□□□ -0.17
HMGN1-220ENST00000492280 USP17L11C9JVI0 530 aa13.97□□□□□ -0.17
HMGN1-220ENST00000492280 USP17L18D6R9N7 530 aa13.97□□□□□ -0.17
HMGN1-220ENST00000492280 USP17L22D6RA61 530 aa13.97□□□□□ -0.17
HMGN1-220ENST00000492280 USP17L17D6RBQ6 530 aa13.97□□□□□ -0.17
HMGN1-220ENST00000492280 USP17L19D6RCP7 530 aa13.97□□□□□ -0.17
HMGN1-220ENST00000492280 USP17L20D6RJB6 530 aa13.97□□□□□ -0.17
HMGN1-220ENST00000492280 IDEP14735 1019 aa13.97□□□□□ -0.17
HMGN1-220ENST00000492280 HOXA10P31260 410 aaPredicted RBP13.97□□□□□ -0.17
HMGN1-220ENST00000492280 GABPAQ06546 454 aa13.97□□□□□ -0.17
HMGN1-220ENST00000492280 USP17L24Q0WX57 530 aa13.97□□□□□ -0.17
HMGN1-220ENST00000492280 CALCRLQ16602 461 aa13.97□□□□□ -0.17
HMGN1-220ENST00000492280 ECM1Q16610 540 aa13.97□□□□□ -0.17
HMGN1-220ENST00000492280 USP17L6PQ6QN14 398 aa13.97□□□□□ -0.17
HMGN1-220ENST00000492280 SLC35F6Q8N357 371 aa13.97□□□□□ -0.17
HMGN1-220ENST00000492280 CCSER1Q9C0I3 900 aa13.97□□□□□ -0.17
HMGN1-220ENST00000492280 AGPAT5Q9NUQ2 364 aa13.97□□□□□ -0.17
HMGN1-220ENST00000492280 EXOC1Q9NV70 894 aa13.97□□□□□ -0.17
HMGN1-220ENST00000492280 RNF216Q9NWF9 866 aaPredicted RBP13.97□□□□□ -0.17
HMGN1-220ENST00000492280 MRFAP1Q9Y605 127 aa13.97□□□□□ -0.17
HMGN1-220ENST00000492280 GDF11O95390 407 aa13.96□□□□□ -0.17
HMGN1-220ENST00000492280 MMP10P09238 476 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms