RNA–Protein interactions for RNA: ENST00000491990.5

NUP188-209, Transcript of nucleoporin 188, humanhuman

TSL 5

Gene NUP188, Length 381 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-209ENST00000491990 SH3RF1Q7Z6J0 888 aa27.19■■□□□ 1.94
NUP188-209ENST00000491990 DEFB123Q8N688 67 aa27.19■■□□□ 1.94
NUP188-209ENST00000491990 BADQ92934 168 aa27.19■■□□□ 1.94
NUP188-209ENST00000491990 TRIM43Q96BQ3 446 aaPredicted RBP27.19■■□□□ 1.94
NUP188-209ENST00000491990 UPF3AQ9H1J1 476 aaKnown RBP27.19■■□□□ 1.94
NUP188-209ENST00000491990 SUPT16HQ9Y5B9 1047 aaKnown RBP27.19■■□□□ 1.94
NUP188-209ENST00000491990 MYADML2A6NDP7 307 aa27.18■■□□□ 1.94
NUP188-209ENST00000491990 PQBP1O60828 265 aaKnown RBP27.18■■□□□ 1.94
NUP188-209ENST00000491990 NSMFQ6X4W1 530 aa27.18■■□□□ 1.94
NUP188-209ENST00000491990 GLT1D1Q96MS3 346 aa27.18■■□□□ 1.94
NUP188-209ENST00000491990 NEDD4P46934 1319 aa27.17■■□□□ 1.94
NUP188-209ENST00000491990 ANKRD33Q7Z3H0 272 aa27.17■■□□□ 1.94
NUP188-209ENST00000491990 TOX2Q96NM4 488 aa27.17■■□□□ 1.94
NUP188-209ENST00000491990 PNMA2Q9UL42 364 aa27.17■■□□□ 1.94
NUP188-209ENST00000491990 ELP1O95163 1332 aa27.16■■□□□ 1.94
NUP188-209ENST00000491990 TNFAIP2Q03169 654 aa27.16■■□□□ 1.94
NUP188-209ENST00000491990 ZNF543Q08ER8 600 aa27.16■■□□□ 1.94
NUP188-209ENST00000491990 CCDC178Q5BJE1 867 aa27.16■■□□□ 1.94
NUP188-209ENST00000491990 GNASQ5JWF2 1037 aa27.16■■□□□ 1.94
NUP188-209ENST00000491990 DSCC1Q9BVC3 393 aa27.16■■□□□ 1.94
NUP188-209ENST00000491990 DCDC2CA8MYV0 355 aa27.15■■□□□ 1.94
NUP188-209ENST00000491990 KIAA0355O15063 1070 aa27.15■■□□□ 1.94
NUP188-209ENST00000491990 ASGR1P07306 291 aa27.15■■□□□ 1.94
NUP188-209ENST00000491990 SNHG28P0DPA3 235 aa27.15■■□□□ 1.94
NUP188-209ENST00000491990 NOL8Q76FK4 1167 aaKnown RBP27.15■■□□□ 1.94
NUP188-209ENST00000491990 IQCA1Q86XH1 822 aa27.15■■□□□ 1.94
NUP188-209ENST00000491990 DGKHQ86XP1 1220 aa27.15■■□□□ 1.94
NUP188-209ENST00000491990 TMEM39AQ9NV64 488 aa27.15■■□□□ 1.94
NUP188-209ENST00000491990 ASTN1O14525 1302 aa27.15■■□□□ 1.94
NUP188-209ENST00000491990 LCTP09848 1927 aa27.14■■□□□ 1.94
NUP188-209ENST00000491990 LRRC37A2A6NM11 1700 aa27.14■■□□□ 1.94
NUP188-209ENST00000491990 RAG1P15918 1043 aa27.14■■□□□ 1.94
NUP188-209ENST00000491990 NKX3-2P78367 333 aa27.14■■□□□ 1.94
NUP188-209ENST00000491990 IRX5P78411 483 aaPredicted RBP27.14■■□□□ 1.94
NUP188-209ENST00000491990 Q7L0L9 218 aa27.14■■□□□ 1.94
NUP188-209ENST00000491990 VTI1AQ96AJ9 217 aa27.14■■□□□ 1.94
NUP188-209ENST00000491990 ZKSCAN3Q9BRR0 538 aa27.14■■□□□ 1.94
NUP188-209ENST00000491990 ADD3Q9UEY8 706 aaKnown RBP27.14■■□□□ 1.94
NUP188-209ENST00000491990 CTNNA3Q9UI47 895 aa27.14■■□□□ 1.94
NUP188-209ENST00000491990 LAMA2P24043 3122 aaKnown RBP27.14■■□□□ 1.93
NUP188-209ENST00000491990 MROH7Q68CQ1 1323 aa27.14■■□□□ 1.93
NUP188-209ENST00000491990 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.13■■□□□ 1.93
NUP188-209ENST00000491990 BAATQ14032 418 aaPredicted RBP27.13■■□□□ 1.93
NUP188-209ENST00000491990 SHHQ15465 462 aa27.13■■□□□ 1.93
NUP188-209ENST00000491990 IMMTQ16891 758 aaKnown RBP27.13■■□□□ 1.93
NUP188-209ENST00000491990 GPATCH4Q5T3I0 446 aaKnown RBP27.13■■□□□ 1.93
NUP188-209ENST00000491990 NFIBO00712 420 aa27.12■■□□□ 1.93
NUP188-209ENST00000491990 KDM4AO75164 1064 aa27.12■■□□□ 1.93
NUP188-209ENST00000491990 FAAP100Q0VG06 881 aa27.12■■□□□ 1.93
NUP188-209ENST00000491990 VTA1Q9NP79 307 aa27.12■■□□□ 1.93
NUP188-209ENST00000491990 LOC102724159A0A0B4J2E5 919 aa27.11■■□□□ 1.93
NUP188-209ENST00000491990 A0A0U1RQG5 324 aaPredicted RBP27.11■■□□□ 1.93
NUP188-209ENST00000491990 ITGB8P26012 769 aa27.11■■□□□ 1.93
NUP188-209ENST00000491990 PWP2Q15269 919 aaKnown RBP27.11■■□□□ 1.93
NUP188-209ENST00000491990 C9orf50Q5SZB4 431 aa27.11■■□□□ 1.93
NUP188-209ENST00000491990 IQSEC1Q6DN90 963 aa27.11■■□□□ 1.93
NUP188-209ENST00000491990 TLK2Q86UE8 772 aa27.11■■□□□ 1.93
NUP188-209ENST00000491990 MORC4Q8TE76 937 aa27.11■■□□□ 1.93
NUP188-209ENST00000491990 AP5M1Q9H0R1 490 aa27.11■■□□□ 1.93
NUP188-209ENST00000491990 MTMR10Q9NXD2 777 aa27.11■■□□□ 1.93
NUP188-209ENST00000491990 GNEQ9Y223 722 aaKnown RBP27.11■■□□□ 1.93
NUP188-209ENST00000491990 WDR19Q8NEZ3 1342 aa27.11■■□□□ 1.93
NUP188-209ENST00000491990 PTPDC1A2A3K4 754 aa27.1■■□□□ 1.93
NUP188-209ENST00000491990 B4E1Z4 1266 aa27.1■■□□□ 1.93
NUP188-209ENST00000491990 CTAGE5O15320 804 aa27.1■■□□□ 1.93
NUP188-209ENST00000491990 CDK7P50613 346 aa27.1■■□□□ 1.93
NUP188-209ENST00000491990 FAM109BQ6ICB4 259 aaPredicted RBP27.1■■□□□ 1.93
NUP188-209ENST00000491990 EEPD1Q7L9B9 569 aa27.1■■□□□ 1.93
NUP188-209ENST00000491990 FBXO16Q8IX29 292 aaPredicted RBP27.1■■□□□ 1.93
NUP188-209ENST00000491990 PNMA1Q8ND90 353 aa27.1■■□□□ 1.93
NUP188-209ENST00000491990 PURBQ96QR8 312 aaKnown RBP27.1■■□□□ 1.93
NUP188-209ENST00000491990 KAT14Q9H8E8 782 aa27.1■■□□□ 1.93
NUP188-209ENST00000491990 DDX49Q9Y6V7 483 aaKnown RBP27.1■■□□□ 1.93
NUP188-209ENST00000491990 COL6A3P12111 3177 aa27.09■■□□□ 1.93
NUP188-209ENST00000491990 ARVCFO00192 962 aa27.09■■□□□ 1.93
NUP188-209ENST00000491990 SMPD1P17405 629 aa27.09■■□□□ 1.93
NUP188-209ENST00000491990 ALDH5A1P51649 535 aaPredicted RBP27.09■■□□□ 1.93
NUP188-209ENST00000491990 BEX3Q00994 111 aa27.09■■□□□ 1.93
NUP188-209ENST00000491990 TAPT1Q6NXT6 567 aa27.09■■□□□ 1.93
NUP188-209ENST00000491990 CLEC4DQ8WXI8 215 aa27.09■■□□□ 1.93
NUP188-209ENST00000491990 ANKS1AQ92625 1134 aa27.09■■□□□ 1.93
NUP188-209ENST00000491990 ZSCAN10Q96SZ4 725 aaPredicted RBP27.09■■□□□ 1.93
NUP188-209ENST00000491990 KRT23Q9C075 422 aa27.09■■□□□ 1.93
NUP188-209ENST00000491990 PDGFCQ9NRA1 345 aa27.09■■□□□ 1.93
NUP188-209ENST00000491990 Q9Y3F1 56 aa27.09■■□□□ 1.93
NUP188-209ENST00000491990 GOLGA8HP0CJ92 632 aa27.08■■□□□ 1.93
NUP188-209ENST00000491990 PDE4AP27815 886 aa27.08■■□□□ 1.93
NUP188-209ENST00000491990 FPGSQ05932 587 aa27.08■■□□□ 1.93
NUP188-209ENST00000491990 FSCN1Q16658 493 aaKnown RBP27.08■■□□□ 1.93
NUP188-209ENST00000491990 TTC22Q5TAA0 569 aa27.08■■□□□ 1.93
NUP188-209ENST00000491990 RNF207Q6ZRF8 634 aa27.08■■□□□ 1.93
NUP188-209ENST00000491990 CNNM2Q9H8M5 875 aa27.08■■□□□ 1.93
NUP188-209ENST00000491990 ZSWIM5Q9P217 1185 aa27.08■■□□□ 1.93
NUP188-209ENST00000491990 DYNC1LI2O43237 492 aaPredicted RBP27.07■■□□□ 1.92
NUP188-209ENST00000491990 ZEB2O60315 1214 aa27.07■■□□□ 1.92
NUP188-209ENST00000491990 CABYRO75952 493 aa27.07■■□□□ 1.92
NUP188-209ENST00000491990 CALML3P27482 149 aa27.07■■□□□ 1.92
NUP188-209ENST00000491990 KIAA1211Q6ZU35 1233 aa27.07■■□□□ 1.92
NUP188-209ENST00000491990 TBX21Q9UL17 535 aa27.07■■□□□ 1.92
NUP188-209ENST00000491990 TLR3O15455 904 aaKnown RBP27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms