RNA–Protein interactions for RNA: ENST00000491787.7

PBX3-209, Transcript of PBX homeobox 3, humanhuman

TSL 5

Gene PBX3, Length 875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-209ENST00000491787 IKQ13123 557 aaPredicted RBP20.42■□□□□ 0.86
PBX3-209ENST00000491787 RASGRP2Q7LDG7 609 aa20.42■□□□□ 0.86
PBX3-209ENST00000491787 PRUNE2Q8WUY3 3088 aa20.41■□□□□ 0.86
PBX3-209ENST00000491787 MYO9BQ13459 2157 aa20.41■□□□□ 0.86
PBX3-209ENST00000491787 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.41■□□□□ 0.86
PBX3-209ENST00000491787 ICAM1P05362 532 aa20.41■□□□□ 0.86
PBX3-209ENST00000491787 TOP1P11387 765 aaKnown RBP20.41■□□□□ 0.86
PBX3-209ENST00000491787 TNFAIP2Q03169 654 aa20.41■□□□□ 0.86
PBX3-209ENST00000491787 MUM1L1Q5H9M0 696 aa20.41■□□□□ 0.86
PBX3-209ENST00000491787 SMC5Q8IY18 1101 aa20.41■□□□□ 0.86
PBX3-209ENST00000491787 SLC43A3Q8NBI5 491 aa20.41■□□□□ 0.86
PBX3-209ENST00000491787 TMEM47Q9BQJ4 181 aa20.41■□□□□ 0.86
PBX3-209ENST00000491787 TTYH1Q9H313 450 aaPredicted RBP20.41■□□□□ 0.86
PBX3-209ENST00000491787 Q9Y3F1 56 aa20.41■□□□□ 0.86
PBX3-209ENST00000491787 TMEM265A0A087WTH1 108 aa20.4■□□□□ 0.86
PBX3-209ENST00000491787 A0A0U1RQG5 324 aaPredicted RBP20.4■□□□□ 0.86
PBX3-209ENST00000491787 PCP11498 1178 aaKnown RBP20.4■□□□□ 0.86
PBX3-209ENST00000491787 SNAP25P60880 206 aa20.4■□□□□ 0.86
PBX3-209ENST00000491787 IQSEC1Q6DN90 963 aa20.4■□□□□ 0.86
PBX3-209ENST00000491787 TTBK2Q6IQ55 1244 aa20.4■□□□□ 0.86
PBX3-209ENST00000491787 MFSD5Q6N075 450 aa20.4■□□□□ 0.86
PBX3-209ENST00000491787 TAPT1Q6NXT6 567 aa20.4■□□□□ 0.86
PBX3-209ENST00000491787 CCDC174Q6PII3 467 aa20.4■□□□□ 0.86
PBX3-209ENST00000491787 ZNF589Q86UQ0 364 aaPredicted RBP20.4■□□□□ 0.86
PBX3-209ENST00000491787 FAM126BQ8IXS8 530 aa20.4■□□□□ 0.86
PBX3-209ENST00000491787 CHMP4CQ96CF2 233 aa20.4■□□□□ 0.86
PBX3-209ENST00000491787 FAM161BQ96MY7 647 aa20.4■□□□□ 0.86
PBX3-209ENST00000491787 TTC14Q96N46 770 aa20.4■□□□□ 0.86
PBX3-209ENST00000491787 CDX2Q99626 313 aaPredicted RBP20.4■□□□□ 0.86
PBX3-209ENST00000491787 ISY1Q9ULR0 285 aaKnown RBP20.4■□□□□ 0.86
PBX3-209ENST00000491787 LOC102724159A0A0B4J2E5 919 aa20.39■□□□□ 0.85
PBX3-209ENST00000491787 CD4P01730 458 aa20.39■□□□□ 0.85
PBX3-209ENST00000491787 NMIQ13287 307 aaPredicted RBP20.39■□□□□ 0.85
PBX3-209ENST00000491787 PWP2Q15269 919 aaKnown RBP20.39■□□□□ 0.85
PBX3-209ENST00000491787 RNPC3Q96LT9 517 aaKnown RBP20.39■□□□□ 0.85
PBX3-209ENST00000491787 CCPG1Q9ULG6 757 aa20.39■□□□□ 0.85
PBX3-209ENST00000491787 CABYRO75952 493 aa20.38■□□□□ 0.85
PBX3-209ENST00000491787 SMPD1P17405 629 aa20.38■□□□□ 0.85
PBX3-209ENST00000491787 SYDE2Q5VT97 1194 aa20.38■□□□□ 0.85
PBX3-209ENST00000491787 C16orf59Q7L2K0 433 aa20.38■□□□□ 0.85
PBX3-209ENST00000491787 YTHDC1Q96MU7 727 aaKnown RBP20.38■□□□□ 0.85
PBX3-209ENST00000491787 SEZ6LQ9BYH1 1024 aa20.38■□□□□ 0.85
PBX3-209ENST00000491787 LNPKQ9C0E8 428 aa20.38■□□□□ 0.85
PBX3-209ENST00000491787 OSBPL3Q9H4L5 887 aa20.38■□□□□ 0.85
PBX3-209ENST00000491787 CCDC171Q6TFL3 1326 aa20.37■□□□□ 0.85
PBX3-209ENST00000491787 SNHG28P0DPA3 235 aa20.37■□□□□ 0.85
PBX3-209ENST00000491787 PDHBP11177 359 aa20.37■□□□□ 0.85
PBX3-209ENST00000491787 BEX3Q00994 111 aa20.37■□□□□ 0.85
PBX3-209ENST00000491787 CCDC96Q2M329 555 aa20.37■□□□□ 0.85
PBX3-209ENST00000491787 AKNAD1Q5T1N1 836 aa20.37■□□□□ 0.85
PBX3-209ENST00000491787 RASIP1Q5U651 963 aa20.37■□□□□ 0.85
PBX3-209ENST00000491787 TLK2Q86UE8 772 aa20.37■□□□□ 0.85
PBX3-209ENST00000491787 VTI1AQ96AJ9 217 aa20.37■□□□□ 0.85
PBX3-209ENST00000491787 VTA1Q9NP79 307 aa20.37■□□□□ 0.85
PBX3-209ENST00000491787 PDGFCQ9NRA1 345 aa20.37■□□□□ 0.85
PBX3-209ENST00000491787 GRIN2DO15399 1336 aa20.36■□□□□ 0.85
PBX3-209ENST00000491787 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.36■□□□□ 0.85
PBX3-209ENST00000491787 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.36■□□□□ 0.85
PBX3-209ENST00000491787 SLC16A2P36021 539 aa20.36■□□□□ 0.85
PBX3-209ENST00000491787 PPIGQ13427 754 aaKnown RBP eCLIP20.36■□□□□ 0.85
PBX3-209ENST00000491787 BAATQ14032 418 aaPredicted RBP20.36■□□□□ 0.85
PBX3-209ENST00000491787 FSCN1Q16658 493 aaKnown RBP20.36■□□□□ 0.85
PBX3-209ENST00000491787 RRP12Q5JTH9 1297 aaKnown RBP20.36■□□□□ 0.85
PBX3-209ENST00000491787 PURBQ96QR8 312 aaKnown RBP20.36■□□□□ 0.85
PBX3-209ENST00000491787 PNMA2Q9UL42 364 aa20.36■□□□□ 0.85
PBX3-209ENST00000491787 DDX49Q9Y6V7 483 aaKnown RBP20.36■□□□□ 0.85
PBX3-209ENST00000491787 RBM47A0AV96 593 aaKnown RBP20.35■□□□□ 0.85
PBX3-209ENST00000491787 DYNC1LI2O43237 492 aaPredicted RBP20.35■□□□□ 0.85
PBX3-209ENST00000491787 SDSP20132 328 aa20.35■□□□□ 0.85
PBX3-209ENST00000491787 NT5C2P49902 561 aa20.35■□□□□ 0.85
PBX3-209ENST00000491787 TMEM240Q5SV17 173 aa20.35■□□□□ 0.85
PBX3-209ENST00000491787 CXCL17Q6UXB2 119 aa20.35■□□□□ 0.85
PBX3-209ENST00000491787 NSMFQ6X4W1 530 aa20.35■□□□□ 0.85
PBX3-209ENST00000491787 MFSD6Q6ZSS7 791 aa20.35■□□□□ 0.85
PBX3-209ENST00000491787 PLEKHM2Q8IWE5 1019 aa20.35■□□□□ 0.85
PBX3-209ENST00000491787 CLEC4DQ8WXI8 215 aa20.35■□□□□ 0.85
PBX3-209ENST00000491787 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.35■□□□□ 0.85
PBX3-209ENST00000491787 AP5M1Q9H0R1 490 aa20.35■□□□□ 0.85
PBX3-209ENST00000491787 RWDD1Q9H446 243 aaPredicted RBP20.35■□□□□ 0.85
PBX3-209ENST00000491787 MTMR7Q9Y216 660 aa20.35■□□□□ 0.85
PBX3-209ENST00000491787 TRIM6-TRIM34B2RNG4 842 aa20.34■□□□□ 0.85
PBX3-209ENST00000491787 TLR3O15455 904 aaKnown RBP20.34■□□□□ 0.85
PBX3-209ENST00000491787 ZEB2O60315 1214 aa20.34■□□□□ 0.85
PBX3-209ENST00000491787 PTGS1P23219 599 aa20.34■□□□□ 0.85
PBX3-209ENST00000491787 HAND2P61296 217 aa20.34■□□□□ 0.85
PBX3-209ENST00000491787 ZNF543Q08ER8 600 aa20.34■□□□□ 0.85
PBX3-209ENST00000491787 DUSP28Q4G0W2 176 aa20.34■□□□□ 0.85
PBX3-209ENST00000491787 TMEM63BQ5T3F8 832 aa20.34■□□□□ 0.85
PBX3-209ENST00000491787 NOL8Q76FK4 1167 aaKnown RBP20.34■□□□□ 0.85
PBX3-209ENST00000491787 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.34■□□□□ 0.85
PBX3-209ENST00000491787 FBXO16Q8IX29 292 aaPredicted RBP20.34■□□□□ 0.85
PBX3-209ENST00000491787 GPCPD1Q9NPB8 672 aa20.34■□□□□ 0.85
PBX3-209ENST00000491787 TOMM22Q9NS69 142 aa20.34■□□□□ 0.85
PBX3-209ENST00000491787 ADD3Q9UEY8 706 aaKnown RBP20.34■□□□□ 0.85
PBX3-209ENST00000491787 FRMPD2Q68DX3 1309 aaPredicted RBP20.33■□□□□ 0.85
PBX3-209ENST00000491787 WDR19Q8NEZ3 1342 aa20.33■□□□□ 0.85
PBX3-209ENST00000491787 LAMA4Q16363 1823 aa20.33■□□□□ 0.85
PBX3-209ENST00000491787 NFIBO00712 420 aa20.33■□□□□ 0.85
PBX3-209ENST00000491787 ALDH5A1P51649 535 aaPredicted RBP20.33■□□□□ 0.85
PBX3-209ENST00000491787 MFAP1P55081 439 aaKnown RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms