RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 CYP2R1Q6VVX0 501 aa7.28□□□□□ -1.24
PHC3-213ENST00000491258 KIAA0825Q8IV33 1275 aa7.28□□□□□ -1.24
PHC3-213ENST00000491258 ADGRG2Q8IZP9 1017 aa7.28□□□□□ -1.24
PHC3-213ENST00000491258 BRF1Q92994 677 aa7.28□□□□□ -1.24
PHC3-213ENST00000491258 BORCS6Q96GS4 357 aa7.28□□□□□ -1.24
PHC3-213ENST00000491258 PDLIM7Q9NR12 457 aa7.28□□□□□ -1.24
PHC3-213ENST00000491258 FAN1Q9Y2M0 1017 aa7.28□□□□□ -1.24
PHC3-213ENST00000491258 SRGAP3O43295 1099 aa7.27□□□□□ -1.25
PHC3-213ENST00000491258 PRICKLE3O43900 615 aaPredicted RBP7.27□□□□□ -1.25
PHC3-213ENST00000491258 SPATS1Q496A3 300 aa7.27□□□□□ -1.25
PHC3-213ENST00000491258 PPFIBP1Q86W92 1011 aa7.27□□□□□ -1.25
PHC3-213ENST00000491258 SPON2Q9BUD6 331 aa7.27□□□□□ -1.25
PHC3-213ENST00000491258 USP40Q9NVE5 1235 aa7.27□□□□□ -1.25
PHC3-213ENST00000491258 FAM86C1Q9NVL1 165 aa7.27□□□□□ -1.25
PHC3-213ENST00000491258 DBR1Q9UK59 544 aaKnown RBP7.27□□□□□ -1.25
PHC3-213ENST00000491258 PLA2G2DQ9UNK4 145 aa7.27□□□□□ -1.25
PHC3-213ENST00000491258 PMF1-BGLAPU3KQ54 211 aa7.27□□□□□ -1.25
PHC3-213ENST00000491258 A0A1B0GTL3 188 aa7.26□□□□□ -1.25
PHC3-213ENST00000491258 F8W031 263 aaPredicted RBP7.26□□□□□ -1.25
PHC3-213ENST00000491258 FGF10O15520 208 aaPredicted RBP7.26□□□□□ -1.25
PHC3-213ENST00000491258 PLA2G1BP04054 148 aaKnown RBP7.26□□□□□ -1.25
PHC3-213ENST00000491258 TP53P04637 393 aaPredicted RBP7.26□□□□□ -1.25
PHC3-213ENST00000491258 NOP2P46087 812 aaKnown RBP7.26□□□□□ -1.25
PHC3-213ENST00000491258 ZNF445P59923 1031 aa7.26□□□□□ -1.25
PHC3-213ENST00000491258 FOXO4P98177 505 aa7.26□□□□□ -1.25
PHC3-213ENST00000491258 INTS3Q68E01 1043 aaKnown RBP7.26□□□□□ -1.25
PHC3-213ENST00000491258 USP48Q86UV5 1035 aa7.26□□□□□ -1.25
PHC3-213ENST00000491258 SMARCC1Q92922 1105 aaPredicted RBP7.26□□□□□ -1.25
PHC3-213ENST00000491258 BCL2L13Q9BXK5 485 aa7.26□□□□□ -1.25
PHC3-213ENST00000491258 GP6Q9HCN6 339 aa7.26□□□□□ -1.25
PHC3-213ENST00000491258 ZNRF3Q9ULT6 936 aa7.26□□□□□ -1.25
PHC3-213ENST00000491258 ATF2P15336 505 aa7.25□□□□□ -1.25
PHC3-213ENST00000491258 FBLN1P23142 703 aa7.25□□□□□ -1.25
PHC3-213ENST00000491258 PRR5P85299 388 aa7.25□□□□□ -1.25
PHC3-213ENST00000491258 MRPL58Q14197 206 aaKnown RBP7.25□□□□□ -1.25
PHC3-213ENST00000491258 VWA3BQ502W6 1294 aa7.25□□□□□ -1.25
PHC3-213ENST00000491258 ZNF326Q5BKZ1 582 aaKnown RBP7.25□□□□□ -1.25
PHC3-213ENST00000491258 AXDND1Q5T1B0 1012 aaPredicted RBP7.25□□□□□ -1.25
PHC3-213ENST00000491258 NT5DC1Q5TFE4 455 aa7.25□□□□□ -1.25
PHC3-213ENST00000491258 FIBCD1Q8N539 461 aa7.25□□□□□ -1.25
PHC3-213ENST00000491258 RGS22Q8NE09 1264 aa7.25□□□□□ -1.25
PHC3-213ENST00000491258 FNIP1Q8TF40 1166 aa7.25□□□□□ -1.25
PHC3-213ENST00000491258 GIPC2Q8TF65 315 aa7.25□□□□□ -1.25
PHC3-213ENST00000491258 FERD3LQ96RJ6 166 aa7.25□□□□□ -1.25
PHC3-213ENST00000491258 SPATA25Q9BR10 227 aa7.25□□□□□ -1.25
PHC3-213ENST00000491258 BCL11AQ9H165 835 aa7.25□□□□□ -1.25
PHC3-213ENST00000491258 CD3EP07766 207 aa7.24□□□□□ -1.25
PHC3-213ENST00000491258 IMPDH2P12268 514 aa7.24□□□□□ -1.25
PHC3-213ENST00000491258 EFEMP1Q12805 493 aa7.24□□□□□ -1.25
PHC3-213ENST00000491258 UBXN11Q5T124 520 aa7.24□□□□□ -1.25
PHC3-213ENST00000491258 FBXW10Q5XX13 1052 aa7.24□□□□□ -1.25
PHC3-213ENST00000491258 LIPIQ6XZB0 460 aa7.24□□□□□ -1.25
PHC3-213ENST00000491258 PTCHD1Q96NR3 888 aa7.24□□□□□ -1.25
PHC3-213ENST00000491258 FCRL3Q96P31 734 aaPredicted RBP7.24□□□□□ -1.25
PHC3-213ENST00000491258 SRRTQ9BXP5 876 aaKnown RBP7.24□□□□□ -1.25
PHC3-213ENST00000491258 SF3B6Q9Y3B4 125 aaKnown RBP7.24□□□□□ -1.25
PHC3-213ENST00000491258 FHOD1Q9Y613 1164 aa7.24□□□□□ -1.25
PHC3-213ENST00000491258 TBC1D8O95759 1140 aa7.23□□□□□ -1.25
PHC3-213ENST00000491258 IFNGR1P15260 489 aa7.23□□□□□ -1.25
PHC3-213ENST00000491258 CD247P20963 164 aa7.23□□□□□ -1.25
PHC3-213ENST00000491258 MC3RP41968 323 aa7.23□□□□□ -1.25
PHC3-213ENST00000491258 ANKRD39Q53RE8 183 aa7.23□□□□□ -1.25
PHC3-213ENST00000491258 FERMT3Q86UX7 667 aa7.23□□□□□ -1.25
PHC3-213ENST00000491258 ALG3Q92685 438 aa7.23□□□□□ -1.25
PHC3-213ENST00000491258 ZDHHC15Q96MV8 337 aa7.23□□□□□ -1.25
PHC3-213ENST00000491258 NOL6Q9H6R4 1146 aaKnown RBP7.23□□□□□ -1.25
PHC3-213ENST00000491258 L1CAMP32004 1257 aa7.22□□□□□ -1.25
PHC3-213ENST00000491258 CORO7P57737 925 aa7.22□□□□□ -1.25
PHC3-213ENST00000491258 ZXDCQ2QGD7 858 aaPredicted RBP7.22□□□□□ -1.25
PHC3-213ENST00000491258 TAB3Q8N5C8 712 aaPredicted RBP7.22□□□□□ -1.25
PHC3-213ENST00000491258 ZNF526Q8TF50 670 aaPredicted RBP7.22□□□□□ -1.25
PHC3-213ENST00000491258 TM9SF2Q99805 663 aa7.22□□□□□ -1.25
PHC3-213ENST00000491258 RNF38Q9H0F5 515 aa7.22□□□□□ -1.25
PHC3-213ENST00000491258 GZF1Q9H116 711 aaPredicted RBP7.22□□□□□ -1.25
PHC3-213ENST00000491258 RXFP1Q9HBX9 757 aa7.22□□□□□ -1.25
PHC3-213ENST00000491258 ZNF451Q9Y4E5 1061 aa7.22□□□□□ -1.25
PHC3-213ENST00000491258 K7ESM1 405 aa7.21□□□□□ -1.26
PHC3-213ENST00000491258 NCAM1P13591 858 aa7.21□□□□□ -1.26
PHC3-213ENST00000491258 ITGA4P13612 1032 aa7.21□□□□□ -1.26
PHC3-213ENST00000491258 POU4F1Q01851 419 aa7.21□□□□□ -1.26
PHC3-213ENST00000491258 ZYXQ15942 572 aaKnown RBP7.21□□□□□ -1.26
PHC3-213ENST00000491258 ZFYVE27Q5T4F4 411 aa7.21□□□□□ -1.26
PHC3-213ENST00000491258 SAPCD2Q86UD0 394 aa7.21□□□□□ -1.26
PHC3-213ENST00000491258 TMEM87AQ8NBN3 555 aa7.21□□□□□ -1.26
PHC3-213ENST00000491258 BCAS3Q9H6U6 928 aa7.21□□□□□ -1.26
PHC3-213ENST00000491258 ASGR2P07307 311 aa7.2□□□□□ -1.26
PHC3-213ENST00000491258 INSRRP14616 1297 aa7.2□□□□□ -1.26
PHC3-213ENST00000491258 HTRA3P83110 453 aa7.2□□□□□ -1.26
PHC3-213ENST00000491258 PPP2R5DQ14738 602 aa7.2□□□□□ -1.26
PHC3-213ENST00000491258 UNC5AQ6ZN44 842 aa7.2□□□□□ -1.26
PHC3-213ENST00000491258 CABP7Q86V35 215 aa7.2□□□□□ -1.26
PHC3-213ENST00000491258 GPR20Q99678 358 aa7.2□□□□□ -1.26
PHC3-213ENST00000491258 TMPRSS5Q9H3S3 457 aa7.2□□□□□ -1.26
PHC3-213ENST00000491258 SH3D21A4FU49 640 aa7.19□□□□□ -1.26
PHC3-213ENST00000491258 GUCY2CP25092 1073 aa7.19□□□□□ -1.26
PHC3-213ENST00000491258 PUM1Q14671 1186 aaKnown RBP eCLIP7.19□□□□□ -1.26
PHC3-213ENST00000491258 TCEAL1Q15170 157 aa7.19□□□□□ -1.26
PHC3-213ENST00000491258 HHIPL2Q6UWX4 724 aa7.19□□□□□ -1.26
PHC3-213ENST00000491258 RUFY4Q6ZNE9 571 aa7.19□□□□□ -1.26
PHC3-213ENST00000491258 DDX1Q92499 740 aaKnown RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms