RNA–Protein interactions for RNA: ENST00000490851.5

HDAC9-225, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-225ENST00000490851 LETM2Q2VYF4 491 aa11.46□□□□□ -0.58
HDAC9-225ENST00000490851 FKBP1CQ5VVH2 108 aa11.46□□□□□ -0.58
HDAC9-225ENST00000490851 PRAMEF18Q5VWM3 479 aa11.46□□□□□ -0.58
HDAC9-225ENST00000490851 ANKRD23Q86SG2 305 aa11.46□□□□□ -0.58
HDAC9-225ENST00000490851 REXO1Q8N1G1 1221 aaKnown RBP11.46□□□□□ -0.58
HDAC9-225ENST00000490851 DAGLBQ8NCG7 672 aa11.46□□□□□ -0.58
HDAC9-225ENST00000490851 EPSTI1Q96J88 318 aa11.46□□□□□ -0.58
HDAC9-225ENST00000490851 EFCC1Q9HA90 598 aa11.46□□□□□ -0.58
HDAC9-225ENST00000490851 CEP83Q9Y592 693 aa11.46□□□□□ -0.58
HDAC9-225ENST00000490851 ZBTB5O15062 677 aa11.45□□□□□ -0.58
HDAC9-225ENST00000490851 PNOCQ13519 176 aa11.45□□□□□ -0.58
HDAC9-225ENST00000490851 ZRSR1Q15695 479 aaKnown RBP11.45□□□□□ -0.58
HDAC9-225ENST00000490851 CDC37Q16543 378 aaPredicted RBP11.45□□□□□ -0.58
HDAC9-225ENST00000490851 QRICH1Q2TAL8 776 aa11.45□□□□□ -0.58
HDAC9-225ENST00000490851 KIAA1755Q5JYT7 1200 aa11.45□□□□□ -0.58
HDAC9-225ENST00000490851 GALNT17Q6IS24 598 aa11.45□□□□□ -0.58
HDAC9-225ENST00000490851 C11orf57Q6ZUT1 292 aaPredicted RBP11.45□□□□□ -0.58
HDAC9-225ENST00000490851 CNNM3Q8NE01 707 aa11.45□□□□□ -0.58
HDAC9-225ENST00000490851 RNF217Q8TC41 542 aa11.45□□□□□ -0.58
HDAC9-225ENST00000490851 GLIS2Q9BZE0 524 aaPredicted RBP11.45□□□□□ -0.58
HDAC9-225ENST00000490851 CBX8Q9HC52 389 aa11.45□□□□□ -0.58
HDAC9-225ENST00000490851 ARHGEF10LQ9HCE6 1279 aa11.45□□□□□ -0.58
HDAC9-225ENST00000490851 ARFGEF1Q9Y6D6 1849 aa11.45□□□□□ -0.58
HDAC9-225ENST00000490851 FOXN1O15353 648 aa11.45□□□□□ -0.58
HDAC9-225ENST00000490851 BMP3P12645 472 aa11.45□□□□□ -0.58
HDAC9-225ENST00000490851 TRAPPC10P48553 1259 aa11.45□□□□□ -0.58
HDAC9-225ENST00000490851 ATP2C1P98194 919 aaPredicted RBP11.45□□□□□ -0.58
HDAC9-225ENST00000490851 CCDC173Q0VFZ6 552 aa11.45□□□□□ -0.58
HDAC9-225ENST00000490851 STX1AQ16623 288 aa11.45□□□□□ -0.58
HDAC9-225ENST00000490851 USH1GQ495M9 461 aa11.45□□□□□ -0.58
HDAC9-225ENST00000490851 GRAMD1CQ8IYS0 662 aa11.45□□□□□ -0.58
HDAC9-225ENST00000490851 FAM200AQ8TCP9 573 aa11.45□□□□□ -0.58
HDAC9-225ENST00000490851 TRPM4Q8TD43 1214 aa11.45□□□□□ -0.58
HDAC9-225ENST00000490851 SYMPKQ92797 1274 aaKnown RBP11.45□□□□□ -0.58
HDAC9-225ENST00000490851 FZD1Q9UP38 647 aa11.45□□□□□ -0.58
HDAC9-225ENST00000490851 H7C1D1 291 aa11.44□□□□□ -0.58
HDAC9-225ENST00000490851 CCNT1O60563 726 aaKnown RBP11.44□□□□□ -0.58
HDAC9-225ENST00000490851 BMP15O95972 392 aa11.44□□□□□ -0.58
HDAC9-225ENST00000490851 CAP2P40123 477 aa11.44□□□□□ -0.58
HDAC9-225ENST00000490851 ZNF165P49910 485 aa11.44□□□□□ -0.58
HDAC9-225ENST00000490851 TNFAIP1Q13829 316 aa11.44□□□□□ -0.58
HDAC9-225ENST00000490851 NONOQ15233 471 aaKnown RBP eCLIP11.44□□□□□ -0.58
HDAC9-225ENST00000490851 KRT25Q7Z3Z0 450 aa11.44□□□□□ -0.58
HDAC9-225ENST00000490851 GMCL1P1Q8NEA9 526 aa11.44□□□□□ -0.58
HDAC9-225ENST00000490851 TBCKQ8TEA7 893 aa11.44□□□□□ -0.58
HDAC9-225ENST00000490851 DPF2Q92785 391 aa11.44□□□□□ -0.58
HDAC9-225ENST00000490851 DHX58Q96C10 678 aa11.44□□□□□ -0.58
HDAC9-225ENST00000490851 DEFB129Q9H1M3 183 aa11.44□□□□□ -0.58
HDAC9-225ENST00000490851 KIAA1468Q9P260 1216 aa11.44□□□□□ -0.58
HDAC9-225ENST00000490851 SERTAD1Q9UHV2 236 aa11.44□□□□□ -0.58
HDAC9-225ENST00000490851 LMNB1P20700 586 aa11.44□□□□□ -0.58
HDAC9-225ENST00000490851 CDC25AP30304 524 aa11.44□□□□□ -0.58
HDAC9-225ENST00000490851 IL17AQ16552 155 aa11.44□□□□□ -0.58
HDAC9-225ENST00000490851 FAM83BQ5T0W9 1011 aa11.44□□□□□ -0.58
HDAC9-225ENST00000490851 ANGEL2Q5VTE6 544 aaKnown RBP11.44□□□□□ -0.58
HDAC9-225ENST00000490851 KRBA2Q6ZNG9 492 aa11.44□□□□□ -0.58
HDAC9-225ENST00000490851 FERMT2Q96AC1 680 aa11.44□□□□□ -0.58
HDAC9-225ENST00000490851 TEPSINQ96N21 525 aa11.44□□□□□ -0.58
HDAC9-225ENST00000490851 TMEM60Q9H2L4 133 aa11.44□□□□□ -0.58
HDAC9-225ENST00000490851 PGAP2Q9UHJ9 254 aa11.44□□□□□ -0.58
HDAC9-225ENST00000490851 PCDHA1Q9Y5I3 950 aa11.44□□□□□ -0.58
HDAC9-225ENST00000490851 A0A087X0B3 334 aa11.43□□□□□ -0.58
HDAC9-225ENST00000490851 NBPF12Q5TAG4 269 aaPredicted RBP11.43□□□□□ -0.58
HDAC9-225ENST00000490851 SYDE2Q5VT97 1194 aa11.43□□□□□ -0.58
HDAC9-225ENST00000490851 GMCL1Q96IK5 515 aa11.43□□□□□ -0.58
HDAC9-225ENST00000490851 FEZ1Q99689 392 aa11.43□□□□□ -0.58
HDAC9-225ENST00000490851 hCG_1984214I3L0E3 225 aa11.43□□□□□ -0.58
HDAC9-225ENST00000490851 EPS15P42566 896 aa11.43□□□□□ -0.58
HDAC9-225ENST00000490851 DPCR1Q3MIW9 517 aa11.43□□□□□ -0.58
HDAC9-225ENST00000490851 ARMCX6Q7L4S7 300 aa11.43□□□□□ -0.58
HDAC9-225ENST00000490851 SDR16C5Q8N3Y7 309 aa11.43□□□□□ -0.58
HDAC9-225ENST00000490851 ZNF713Q8N859 430 aaPredicted RBP11.43□□□□□ -0.58
HDAC9-225ENST00000490851 ZNF579Q8NAF0 562 aaKnown RBP11.43□□□□□ -0.58
HDAC9-225ENST00000490851 ZNF341Q9BYN7 854 aa11.43□□□□□ -0.58
HDAC9-225ENST00000490851 GOPCQ9HD26 462 aa11.43□□□□□ -0.58
HDAC9-225ENST00000490851 FAM237AA0A1B0GTK4 181 aa11.42□□□□□ -0.58
HDAC9-225ENST00000490851 USP17L15C9J2P7 530 aa11.42□□□□□ -0.58
HDAC9-225ENST00000490851 USP17L13C9JLJ4 530 aa11.42□□□□□ -0.58
HDAC9-225ENST00000490851 USP17L11C9JVI0 530 aa11.42□□□□□ -0.58
HDAC9-225ENST00000490851 USP17L18D6R9N7 530 aa11.42□□□□□ -0.58
HDAC9-225ENST00000490851 USP17L22D6RA61 530 aa11.42□□□□□ -0.58
HDAC9-225ENST00000490851 USP17L17D6RBQ6 530 aa11.42□□□□□ -0.58
HDAC9-225ENST00000490851 USP17L19D6RCP7 530 aa11.42□□□□□ -0.58
HDAC9-225ENST00000490851 USP17L20D6RJB6 530 aa11.42□□□□□ -0.58
HDAC9-225ENST00000490851 TBC1D12O60347 775 aa11.42□□□□□ -0.58
HDAC9-225ENST00000490851 USP17L24Q0WX57 530 aa11.42□□□□□ -0.58
HDAC9-225ENST00000490851 DGKZQ13574 1117 aa11.42□□□□□ -0.58
HDAC9-225ENST00000490851 USP17L6PQ6QN14 398 aa11.42□□□□□ -0.58
HDAC9-225ENST00000490851 ZNF513Q8N8E2 541 aaPredicted RBP11.42□□□□□ -0.58
HDAC9-225ENST00000490851 CUL5Q93034 780 aa11.42□□□□□ -0.58
HDAC9-225ENST00000490851 KIFC2Q96AC6 838 aa11.42□□□□□ -0.58
HDAC9-225ENST00000490851 SYT17Q9BSW7 474 aa11.42□□□□□ -0.58
HDAC9-225ENST00000490851 PSTPIP2Q9H939 334 aa11.42□□□□□ -0.58
HDAC9-225ENST00000490851 ANO10Q9NW15 660 aa11.42□□□□□ -0.58
HDAC9-225ENST00000490851 GGA3Q9NZ52 723 aa11.42□□□□□ -0.58
HDAC9-225ENST00000490851 RNF181Q9P0P0 153 aa11.42□□□□□ -0.58
HDAC9-225ENST00000490851 TMX2Q9Y320 296 aa11.42□□□□□ -0.58
HDAC9-225ENST00000490851 ESYT2A0FGR8 921 aa11.41□□□□□ -0.58
HDAC9-225ENST00000490851 PP2D1A8MPX8 630 aa11.41□□□□□ -0.58
HDAC9-225ENST00000490851 ESPNB1AK53 854 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms