RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 ALAS1P13196 640 aa12.19□□□□□ -0.46
TTC28-207ENST00000490475 MRPL12P52815 198 aaKnown RBP12.19□□□□□ -0.46
TTC28-207ENST00000490475 FPGSQ05932 587 aa12.19□□□□□ -0.46
TTC28-207ENST00000490475 CTDSPL2Q05D32 466 aa12.19□□□□□ -0.46
TTC28-207ENST00000490475 GNASQ5JWF2 1037 aa12.19□□□□□ -0.46
TTC28-207ENST00000490475 CCSAPQ6IQ19 270 aaPredicted RBP12.19□□□□□ -0.46
TTC28-207ENST00000490475 VTI1AQ96AJ9 217 aa12.19□□□□□ -0.46
TTC28-207ENST00000490475 TRIM43Q96BQ3 446 aaPredicted RBP12.19□□□□□ -0.46
TTC28-207ENST00000490475 MAF1Q9H063 256 aa12.19□□□□□ -0.46
TTC28-207ENST00000490475 A1CFQ9NQ94 594 aaKnown RBP12.19□□□□□ -0.46
TTC28-207ENST00000490475 DIAPH3Q9NSV4 1193 aa12.19□□□□□ -0.46
TTC28-207ENST00000490475 FGAP02671 866 aa12.18□□□□□ -0.46
TTC28-207ENST00000490475 ASGR1P07306 291 aa12.18□□□□□ -0.46
TTC28-207ENST00000490475 HSPD1P10809 573 aaKnown RBP12.18□□□□□ -0.46
TTC28-207ENST00000490475 TNFAIP2Q03169 654 aa12.18□□□□□ -0.46
TTC28-207ENST00000490475 SHHQ15465 462 aa12.18□□□□□ -0.46
TTC28-207ENST00000490475 CCDC96Q2M329 555 aa12.18□□□□□ -0.46
TTC28-207ENST00000490475 IQSEC1Q6DN90 963 aa12.18□□□□□ -0.46
TTC28-207ENST00000490475 BTNL9Q6UXG8 535 aa12.18□□□□□ -0.46
TTC28-207ENST00000490475 MFSD6Q6ZSS7 791 aa12.18□□□□□ -0.46
TTC28-207ENST00000490475 NOL8Q76FK4 1167 aaKnown RBP12.18□□□□□ -0.46
TTC28-207ENST00000490475 Q7L0L9 218 aa12.18□□□□□ -0.46
TTC28-207ENST00000490475 RNPC3Q96LT9 517 aaKnown RBP12.18□□□□□ -0.46
TTC28-207ENST00000490475 AP5M1Q9H0R1 490 aa12.18□□□□□ -0.46
TTC28-207ENST00000490475 INCENPQ9NQS7 918 aa12.18□□□□□ -0.46
TTC28-207ENST00000490475 IL17RBQ9NRM6 502 aa12.18□□□□□ -0.46
TTC28-207ENST00000490475 PPP4R2Q9NY27 417 aa12.18□□□□□ -0.46
TTC28-207ENST00000490475 CCPG1Q9ULG6 757 aa12.18□□□□□ -0.46
TTC28-207ENST00000490475 PRR12Q9ULL5 1215 aa12.18□□□□□ -0.46
TTC28-207ENST00000490475 COL6A3P12111 3177 aa12.18□□□□□ -0.46
TTC28-207ENST00000490475 ZNF536O15090 1300 aa12.17□□□□□ -0.46
TTC28-207ENST00000490475 CCDC171Q6TFL3 1326 aa12.17□□□□□ -0.46
TTC28-207ENST00000490475 ARVCFO00192 962 aa12.17□□□□□ -0.46
TTC28-207ENST00000490475 TIMP1P01033 207 aa12.17□□□□□ -0.46
TTC28-207ENST00000490475 FAAP100Q0VG06 881 aa12.17□□□□□ -0.46
TTC28-207ENST00000490475 PPIGQ13427 754 aaKnown RBP eCLIP12.17□□□□□ -0.461e-6■■■□□ 18.1
TTC28-207ENST00000490475 AKNAD1Q5T1N1 836 aa12.17□□□□□ -0.46
TTC28-207ENST00000490475 GPATCH4Q5T3I0 446 aaKnown RBP12.17□□□□□ -0.46
TTC28-207ENST00000490475 KCTD1Q719H9 257 aa12.17□□□□□ -0.46
TTC28-207ENST00000490475 SH3RF1Q7Z6J0 888 aa12.17□□□□□ -0.46
TTC28-207ENST00000490475 TMEM199Q8N511 208 aa12.17□□□□□ -0.46
TTC28-207ENST00000490475 ESR2Q92731 530 aa12.17□□□□□ -0.46
TTC28-207ENST00000490475 AGBL1Q96MI9 1066 aa12.17□□□□□ -0.46
TTC28-207ENST00000490475 IL25Q9H293 177 aa12.17□□□□□ -0.46
TTC28-207ENST00000490475 MTIF3Q9H2K0 278 aaKnown RBP12.17□□□□□ -0.46
TTC28-207ENST00000490475 RANBP17Q9H2T7 1088 aaKnown RBP12.17□□□□□ -0.46
TTC28-207ENST00000490475 VTA1Q9NP79 307 aa12.17□□□□□ -0.46
TTC28-207ENST00000490475 CYP39A1Q9NYL5 469 aa12.17□□□□□ -0.46
TTC28-207ENST00000490475 CUL9Q8IWT3 2517 aa12.16□□□□□ -0.46
TTC28-207ENST00000490475 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.16□□□□□ -0.46
TTC28-207ENST00000490475 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.16□□□□□ -0.46
TTC28-207ENST00000490475 CHMLP26374 656 aa12.16□□□□□ -0.46
TTC28-207ENST00000490475 CDK7P50613 346 aa12.16□□□□□ -0.46
TTC28-207ENST00000490475 CNTN2Q02246 1040 aa12.16□□□□□ -0.46
TTC28-207ENST00000490475 BRDTQ58F21 947 aaPredicted RBP12.16□□□□□ -0.46
TTC28-207ENST00000490475 RRP12Q5JTH9 1297 aaKnown RBP12.16□□□□□ -0.46
TTC28-207ENST00000490475 SYDE2Q5VT97 1194 aa12.16□□□□□ -0.46
TTC28-207ENST00000490475 MFSD5Q6N075 450 aa12.16□□□□□ -0.46
TTC28-207ENST00000490475 TLK2Q86UE8 772 aa12.16□□□□□ -0.46
TTC28-207ENST00000490475 IQCA1Q86XH1 822 aa12.16□□□□□ -0.46
TTC28-207ENST00000490475 FGD4Q96M96 766 aa12.16□□□□□ -0.46
TTC28-207ENST00000490475 WDR19Q8NEZ3 1342 aa12.15□□□□□ -0.46
TTC28-207ENST00000490475 RAD50Q92878 1312 aa12.15□□□□□ -0.46
TTC28-207ENST00000490475 DLL1O00548 723 aa12.15□□□□□ -0.46
TTC28-207ENST00000490475 ZNF213O14771 459 aa12.15□□□□□ -0.46
TTC28-207ENST00000490475 NMT2O60551 498 aa12.15□□□□□ -0.46
TTC28-207ENST00000490475 C9orf50Q5SZB4 431 aa12.15□□□□□ -0.46
TTC28-207ENST00000490475 NSMFQ6X4W1 530 aa12.15□□□□□ -0.46
TTC28-207ENST00000490475 DGKHQ86XP1 1220 aa12.15□□□□□ -0.46
TTC28-207ENST00000490475 MORC4Q8TE76 937 aa12.15□□□□□ -0.46
TTC28-207ENST00000490475 LENG1Q96BZ8 264 aaPredicted RBP12.15□□□□□ -0.46
TTC28-207ENST00000490475 TMEM47Q9BQJ4 181 aa12.15□□□□□ -0.46
TTC28-207ENST00000490475 KATNBL1Q9H079 304 aa12.15□□□□□ -0.46
TTC28-207ENST00000490475 TBX21Q9UL17 535 aa12.15□□□□□ -0.46
TTC28-207ENST00000490475 GNEQ9Y223 722 aaKnown RBP12.15□□□□□ -0.46
TTC28-207ENST00000490475 LAMA2P24043 3122 aaKnown RBP12.14□□□□□ -0.47
TTC28-207ENST00000490475 SOWAHBA6NEL2 793 aa12.14□□□□□ -0.47
TTC28-207ENST00000490475 NKRFO15226 690 aaKnown RBP eCLIP12.14□□□□□ -0.47
TTC28-207ENST00000490475 PDHBP11177 359 aa12.14□□□□□ -0.47
TTC28-207ENST00000490475 FSCN1Q16658 493 aaKnown RBP12.14□□□□□ -0.47
TTC28-207ENST00000490475 PSRC1Q6PGN9 363 aaPredicted RBP12.14□□□□□ -0.47
TTC28-207ENST00000490475 DNERQ8NFT8 737 aa12.14□□□□□ -0.47
TTC28-207ENST00000490475 SEMA6BQ9H3T3 888 aa12.14□□□□□ -0.47
TTC28-207ENST00000490475 POLR3EQ9NVU0 708 aa12.14□□□□□ -0.47
TTC28-207ENST00000490475 CTNNA3Q9UI47 895 aa12.14□□□□□ -0.47
TTC28-207ENST00000490475 MTMR7Q9Y216 660 aa12.14□□□□□ -0.47
TTC28-207ENST00000490475 MYADML2A6NDP7 307 aa12.13□□□□□ -0.47
TTC28-207ENST00000490475 SUPT20HL2P0C7V6 817 aa12.13□□□□□ -0.47
TTC28-207ENST00000490475 SNHG28P0DPA3 235 aa12.13□□□□□ -0.47
TTC28-207ENST00000490475 CPT1AP50416 773 aa12.13□□□□□ -0.47
TTC28-207ENST00000490475 HAND2P61296 217 aa12.13□□□□□ -0.47
TTC28-207ENST00000490475 ZNF543Q08ER8 600 aa12.13□□□□□ -0.47
TTC28-207ENST00000490475 DUSP28Q4G0W2 176 aa12.13□□□□□ -0.47
TTC28-207ENST00000490475 MUM1L1Q5H9M0 696 aa12.13□□□□□ -0.47
TTC28-207ENST00000490475 KIAA1211Q6ZU35 1233 aa12.13□□□□□ -0.47
TTC28-207ENST00000490475 FAM126BQ8IXS8 530 aa12.13□□□□□ -0.47
TTC28-207ENST00000490475 SLC43A3Q8NBI5 491 aa12.13□□□□□ -0.47
TTC28-207ENST00000490475 RGS22Q8NE09 1264 aa12.13□□□□□ -0.47
TTC28-207ENST00000490475 GUCD1Q96NT3 240 aa12.13□□□□□ -0.47
TTC28-207ENST00000490475 CNNM2Q9H8M5 875 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms