RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 PPIGQ13427 754 aaKnown RBP eCLIP21■□□□□ 0.953e-7■■□□□ 12.4
YIPF3-208ENST00000490447 RRP12Q5JTH9 1297 aaKnown RBP21■□□□□ 0.95
YIPF3-208ENST00000490447 NSMFQ6X4W1 530 aa21■□□□□ 0.95
YIPF3-208ENST00000490447 TLK2Q86UE8 772 aa21■□□□□ 0.95
YIPF3-208ENST00000490447 TMEM199Q8N511 208 aa21■□□□□ 0.95
YIPF3-208ENST00000490447 MYLIPQ8WY64 445 aa21■□□□□ 0.95
YIPF3-208ENST00000490447 AP5M1Q9H0R1 490 aa21■□□□□ 0.95
YIPF3-208ENST00000490447 ZEB2O60315 1214 aa20.99■□□□□ 0.95
YIPF3-208ENST00000490447 ICAM1P05362 532 aa20.99■□□□□ 0.95
YIPF3-208ENST00000490447 MUM1L1Q5H9M0 696 aa20.99■□□□□ 0.95
YIPF3-208ENST00000490447 RASGRP2Q7LDG7 609 aa20.99■□□□□ 0.95
YIPF3-208ENST00000490447 PPP1R12CQ9BZL4 782 aa20.99■□□□□ 0.95
YIPF3-208ENST00000490447 CYP39A1Q9NYL5 469 aa20.99■□□□□ 0.95
YIPF3-208ENST00000490447 VCANP13611 3396 aa20.99■□□□□ 0.95
YIPF3-208ENST00000490447 CUL9Q8IWT3 2517 aa20.98■□□□□ 0.95
YIPF3-208ENST00000490447 CABYRO75952 493 aa20.98■□□□□ 0.95
YIPF3-208ENST00000490447 PDE1AP54750 535 aa20.98■□□□□ 0.95
YIPF3-208ENST00000490447 NKX3-2P78367 333 aa20.98■□□□□ 0.95
YIPF3-208ENST00000490447 ALX1Q15699 326 aa20.98■□□□□ 0.95
YIPF3-208ENST00000490447 FSCN1Q16658 493 aaKnown RBP20.98■□□□□ 0.95
YIPF3-208ENST00000490447 MCMDC2Q4G0Z9 681 aa20.98■□□□□ 0.95
YIPF3-208ENST00000490447 EEPD1Q7L9B9 569 aa20.98■□□□□ 0.95
YIPF3-208ENST00000490447 FAM126BQ8IXS8 530 aa20.98■□□□□ 0.95
YIPF3-208ENST00000490447 CRBNQ96SW2 442 aa20.98■□□□□ 0.95
YIPF3-208ENST00000490447 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.98■□□□□ 0.952e-9■■■■□ 22.7
YIPF3-208ENST00000490447 DNAJB2P25686 324 aa20.97■□□□□ 0.95
YIPF3-208ENST00000490447 PSRC1Q6PGN9 363 aaPredicted RBP20.97■□□□□ 0.95
YIPF3-208ENST00000490447 CXCL17Q6UXB2 119 aa20.97■□□□□ 0.95
YIPF3-208ENST00000490447 FBXO16Q8IX29 292 aaPredicted RBP20.97■□□□□ 0.95
YIPF3-208ENST00000490447 GNEQ9Y223 722 aaKnown RBP20.97■□□□□ 0.95
YIPF3-208ENST00000490447 MCM3APO60318 1980 aa20.97■□□□□ 0.95
YIPF3-208ENST00000490447 CTAGE5O15320 804 aa20.96■□□□□ 0.95
YIPF3-208ENST00000490447 DYNC1LI2O43237 492 aaPredicted RBP20.96■□□□□ 0.95
YIPF3-208ENST00000490447 FGAP02671 866 aa20.96■□□□□ 0.95
YIPF3-208ENST00000490447 TOP1P11387 765 aaKnown RBP20.96■□□□□ 0.95
YIPF3-208ENST00000490447 CSF2RAP15509 400 aa20.96■□□□□ 0.95
YIPF3-208ENST00000490447 NOVP48745 357 aa20.96■□□□□ 0.95
YIPF3-208ENST00000490447 SYDE2Q5VT97 1194 aa20.96■□□□□ 0.95
YIPF3-208ENST00000490447 IQSEC1Q6DN90 963 aa20.96■□□□□ 0.95
YIPF3-208ENST00000490447 TICAM2Q86XR7 235 aa20.96■□□□□ 0.95
YIPF3-208ENST00000490447 FAM227BQ96M60 508 aa20.96■□□□□ 0.95
YIPF3-208ENST00000490447 COL25A1Q9BXS0 654 aaPredicted RBP20.96■□□□□ 0.95
YIPF3-208ENST00000490447 RANBP17Q9H2T7 1088 aaKnown RBP20.96■□□□□ 0.95
YIPF3-208ENST00000490447 VTA1Q9NP79 307 aa20.96■□□□□ 0.95
YIPF3-208ENST00000490447 ADD3Q9UEY8 706 aaKnown RBP20.96■□□□□ 0.95
YIPF3-208ENST00000490447 A0A0D9SFI3 127 aa20.95■□□□□ 0.94
YIPF3-208ENST00000490447 TRIM6-TRIM34B2RNG4 842 aa20.95■□□□□ 0.94
YIPF3-208ENST00000490447 FGRP09769 529 aa20.95■□□□□ 0.94
YIPF3-208ENST00000490447 SMPD1P17405 629 aa20.95■□□□□ 0.94
YIPF3-208ENST00000490447 SLC16A2P36021 539 aa20.95■□□□□ 0.94
YIPF3-208ENST00000490447 HDAC1Q13547 482 aaPredicted RBP20.95■□□□□ 0.94
YIPF3-208ENST00000490447 ITGA7Q13683 1181 aa20.95■□□□□ 0.94
YIPF3-208ENST00000490447 TIFAQ96CG3 184 aa20.95■□□□□ 0.94
YIPF3-208ENST00000490447 TMEM47Q9BQJ4 181 aa20.95■□□□□ 0.94
YIPF3-208ENST00000490447 SEZ6LQ9BYH1 1024 aa20.95■□□□□ 0.94
YIPF3-208ENST00000490447 ASTN1O14525 1302 aa20.95■□□□□ 0.94
YIPF3-208ENST00000490447 FRMPD2Q68DX3 1309 aaPredicted RBP20.95■□□□□ 0.94
YIPF3-208ENST00000490447 PRUNE2Q8WUY3 3088 aa20.94■□□□□ 0.94
YIPF3-208ENST00000490447 PTPDC1A2A3K4 754 aa20.94■□□□□ 0.94
YIPF3-208ENST00000490447 HSPD1P10809 573 aaKnown RBP20.94■□□□□ 0.94
YIPF3-208ENST00000490447 TMEM240Q5SV17 173 aa20.94■□□□□ 0.94
YIPF3-208ENST00000490447 TTBK2Q6IQ55 1244 aa20.94■□□□□ 0.94
YIPF3-208ENST00000490447 BTNL9Q6UXG8 535 aa20.94■□□□□ 0.94
YIPF3-208ENST00000490447 KIAA1211Q6ZU35 1233 aa20.94■□□□□ 0.94
YIPF3-208ENST00000490447 GPCPD1Q9NPB8 672 aa20.94■□□□□ 0.94
YIPF3-208ENST00000490447 PDGFCQ9NRA1 345 aa20.94■□□□□ 0.94
YIPF3-208ENST00000490447 TCP11L1Q9NUJ3 509 aa20.94■□□□□ 0.94
YIPF3-208ENST00000490447 Q9Y3F1 56 aa20.94■□□□□ 0.94
YIPF3-208ENST00000490447 DDX49Q9Y6V7 483 aaKnown RBP20.94■□□□□ 0.94
YIPF3-208ENST00000490447 ZMYM6O95789 1325 aa20.94■□□□□ 0.94
YIPF3-208ENST00000490447 CD4P01730 458 aa20.93■□□□□ 0.94
YIPF3-208ENST00000490447 ACRP10323 421 aa20.93■□□□□ 0.94
YIPF3-208ENST00000490447 MFAP1P55081 439 aaKnown RBP20.93■□□□□ 0.94
YIPF3-208ENST00000490447 BAATQ14032 418 aaPredicted RBP20.93■□□□□ 0.94
YIPF3-208ENST00000490447 TAPT1Q6NXT6 567 aa20.93■□□□□ 0.94
YIPF3-208ENST00000490447 MFSD6Q6ZSS7 791 aa20.93■□□□□ 0.94
YIPF3-208ENST00000490447 RILPL2Q969X0 211 aa20.93■□□□□ 0.94
YIPF3-208ENST00000490447 MTIF3Q9H2K0 278 aaKnown RBP20.93■□□□□ 0.94
YIPF3-208ENST00000490447 HIPK3Q9H422 1215 aa20.93■□□□□ 0.94
YIPF3-208ENST00000490447 ZNF576Q9H609 170 aa20.93■□□□□ 0.94
YIPF3-208ENST00000490447 PNMA2Q9UL42 364 aa20.93■□□□□ 0.94
YIPF3-208ENST00000490447 PCP11498 1178 aaKnown RBP20.92■□□□□ 0.94
YIPF3-208ENST00000490447 CYP2C18P33260 490 aa20.92■□□□□ 0.94
YIPF3-208ENST00000490447 ALDH5A1P51649 535 aaPredicted RBP20.92■□□□□ 0.94
YIPF3-208ENST00000490447 HAND2P61296 217 aa20.92■□□□□ 0.94
YIPF3-208ENST00000490447 NMIQ13287 307 aaPredicted RBP20.92■□□□□ 0.94
YIPF3-208ENST00000490447 ZNF365Q70YC5 407 aa20.92■□□□□ 0.94
YIPF3-208ENST00000490447 ZNF589Q86UQ0 364 aaPredicted RBP20.92■□□□□ 0.94
YIPF3-208ENST00000490447 SLC43A3Q8NBI5 491 aa20.92■□□□□ 0.94
YIPF3-208ENST00000490447 PURBQ96QR8 312 aaKnown RBP20.92■□□□□ 0.94
YIPF3-208ENST00000490447 MPHOSPH6Q99547 160 aaKnown RBP20.92■□□□□ 0.94
YIPF3-208ENST00000490447 CCDC171Q6TFL3 1326 aa20.92■□□□□ 0.94
YIPF3-208ENST00000490447 LRRC37A2A6NM11 1700 aa20.91■□□□□ 0.94
YIPF3-208ENST00000490447 LOC102724159A0A0B4J2E5 919 aa20.91■□□□□ 0.94
YIPF3-208ENST00000490447 NFIBO00712 420 aa20.91■□□□□ 0.94
YIPF3-208ENST00000490447 PDHBP11177 359 aa20.91■□□□□ 0.94
YIPF3-208ENST00000490447 GRIN2CQ14957 1233 aa20.91■□□□□ 0.94
YIPF3-208ENST00000490447 PWP2Q15269 919 aaKnown RBP20.91■□□□□ 0.94
YIPF3-208ENST00000490447 C16orf59Q7L2K0 433 aa20.91■□□□□ 0.94
YIPF3-208ENST00000490447 MORC4Q8TE76 937 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms