RNA–Protein interactions for RNA: ENST00000490441.1

DUBR-204, DPPA2 upstream binding RNA, humanhuman

TSL 1 (best) BASIC

Gene DUBR, Length 1,149 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-204ENST00000490441 ZNF536O15090 1300 aa13.27□□□□□ -0.29
DUBR-204ENST00000490441 MROH7Q68CQ1 1323 aa13.27□□□□□ -0.29
DUBR-204ENST00000490441 CCDC171Q6TFL3 1326 aa13.27□□□□□ -0.29
DUBR-204ENST00000490441 KIAA0355O15063 1070 aa13.26□□□□□ -0.29
DUBR-204ENST00000490441 ELP1O95163 1332 aa13.26□□□□□ -0.29
DUBR-204ENST00000490441 ZMYM6O95789 1325 aa13.26□□□□□ -0.29
DUBR-204ENST00000490441 FGRP09769 529 aa13.26□□□□□ -0.29
DUBR-204ENST00000490441 HSPD1P10809 573 aaKnown RBP13.26□□□□□ -0.29
DUBR-204ENST00000490441 CHRM1P11229 460 aaPredicted RBP13.26□□□□□ -0.29
DUBR-204ENST00000490441 TOP1P11387 765 aaKnown RBP13.26□□□□□ -0.29
DUBR-204ENST00000490441 SNAP25P60880 206 aa13.26□□□□□ -0.29
DUBR-204ENST00000490441 NMIQ13287 307 aaPredicted RBP13.26□□□□□ -0.29
DUBR-204ENST00000490441 GNASQ5JWF2 1037 aa13.26□□□□□ -0.29
DUBR-204ENST00000490441 C9orf50Q5SZB4 431 aa13.26□□□□□ -0.29
DUBR-204ENST00000490441 FAM109BQ6ICB4 259 aaPredicted RBP13.26□□□□□ -0.29
DUBR-204ENST00000490441 B4GALNT3Q6L9W6 998 aa13.26□□□□□ -0.29
DUBR-204ENST00000490441 NSMFQ6X4W1 530 aa13.26□□□□□ -0.29
DUBR-204ENST00000490441 FAM133AQ8N9E0 248 aa13.26□□□□□ -0.29
DUBR-204ENST00000490441 TOX2Q96NM4 488 aa13.26□□□□□ -0.29
DUBR-204ENST00000490441 MYADML2A6NDP7 307 aa13.25□□□□□ -0.29
DUBR-204ENST00000490441 ICAM1P05362 532 aa13.25□□□□□ -0.29
DUBR-204ENST00000490441 ASGR1P07306 291 aa13.25□□□□□ -0.29
DUBR-204ENST00000490441 PCP11498 1178 aaKnown RBP13.25□□□□□ -0.29
DUBR-204ENST00000490441 GJA9P57773 515 aa13.25□□□□□ -0.29
DUBR-204ENST00000490441 HAND2P61296 217 aa13.25□□□□□ -0.29
DUBR-204ENST00000490441 TNFAIP2Q03169 654 aa13.25□□□□□ -0.29
DUBR-204ENST00000490441 FPGSQ05932 587 aa13.25□□□□□ -0.29
DUBR-204ENST00000490441 SYDE2Q5VT97 1194 aa13.25□□□□□ -0.29
DUBR-204ENST00000490441 MFSD6Q6ZSS7 791 aa13.25□□□□□ -0.29
DUBR-204ENST00000490441 RASGRP2Q7LDG7 609 aa13.25□□□□□ -0.29
DUBR-204ENST00000490441 ANKRD33Q7Z3H0 272 aa13.25□□□□□ -0.29
DUBR-204ENST00000490441 ZNF589Q86UQ0 364 aaPredicted RBP13.25□□□□□ -0.29
DUBR-204ENST00000490441 SMC5Q8IY18 1101 aa13.25□□□□□ -0.29
DUBR-204ENST00000490441 RNPC3Q96LT9 517 aaKnown RBP13.25□□□□□ -0.29
DUBR-204ENST00000490441 UPF3AQ9H1J1 476 aaKnown RBP13.25□□□□□ -0.29
DUBR-204ENST00000490441 RNF41Q9H4P4 317 aaPredicted RBP13.25□□□□□ -0.29
DUBR-204ENST00000490441 TCP11L1Q9NUJ3 509 aa13.25□□□□□ -0.29
DUBR-204ENST00000490441 CUL9Q8IWT3 2517 aa13.24□□□□□ -0.29
DUBR-204ENST00000490441 A0A0U1RQG5 324 aaPredicted RBP13.24□□□□□ -0.29
DUBR-204ENST00000490441 SOWAHBA6NEL2 793 aa13.24□□□□□ -0.29
DUBR-204ENST00000490441 SLC16A2P36021 539 aa13.24□□□□□ -0.29
DUBR-204ENST00000490441 NOVP48745 357 aa13.24□□□□□ -0.29
DUBR-204ENST00000490441 MUM1L1Q5H9M0 696 aa13.24□□□□□ -0.29
DUBR-204ENST00000490441 AKNAD1Q5T1N1 836 aa13.24□□□□□ -0.29
DUBR-204ENST00000490441 CCSAPQ6IQ19 270 aaPredicted RBP13.24□□□□□ -0.29
DUBR-204ENST00000490441 CHD1LQ86WJ1 897 aa13.24□□□□□ -0.29
DUBR-204ENST00000490441 FAM161BQ96MY7 647 aa13.24□□□□□ -0.29
DUBR-204ENST00000490441 TMEM47Q9BQJ4 181 aa13.24□□□□□ -0.29
DUBR-204ENST00000490441 AP5M1Q9H0R1 490 aa13.24□□□□□ -0.29
DUBR-204ENST00000490441 RANBP17Q9H2T7 1088 aaKnown RBP13.24□□□□□ -0.29
DUBR-204ENST00000490441 GPCPD1Q9NPB8 672 aa13.24□□□□□ -0.29
DUBR-204ENST00000490441 DIAPH3Q9NSV4 1193 aa13.24□□□□□ -0.29
DUBR-204ENST00000490441 CYP39A1Q9NYL5 469 aa13.24□□□□□ -0.29
DUBR-204ENST00000490441 PNMA2Q9UL42 364 aa13.24□□□□□ -0.29
DUBR-204ENST00000490441 FRMPD2Q68DX3 1309 aaPredicted RBP13.23□□□□□ -0.29
DUBR-204ENST00000490441 TLR3O15455 904 aaKnown RBP13.23□□□□□ -0.29
DUBR-204ENST00000490441 ADCY6O43306 1168 aa13.23□□□□□ -0.29
DUBR-204ENST00000490441 ZEB2O60315 1214 aa13.23□□□□□ -0.29
DUBR-204ENST00000490441 SDSP20132 328 aa13.23□□□□□ -0.29
DUBR-204ENST00000490441 ITGB8P26012 769 aa13.23□□□□□ -0.29
DUBR-204ENST00000490441 SMAD3P84022 425 aaKnown RBP13.23□□□□□ -0.29
DUBR-204ENST00000490441 FAAP100Q0VG06 881 aa13.23□□□□□ -0.29
DUBR-204ENST00000490441 TTBK2Q6IQ55 1244 aa13.23□□□□□ -0.29
DUBR-204ENST00000490441 BTNL9Q6UXG8 535 aa13.23□□□□□ -0.29
DUBR-204ENST00000490441 TLK2Q86UE8 772 aa13.23□□□□□ -0.29
DUBR-204ENST00000490441 ESR2Q92731 530 aa13.23□□□□□ -0.29
DUBR-204ENST00000490441 TTC14Q96N46 770 aa13.23□□□□□ -0.29
DUBR-204ENST00000490441 KATNBL1Q9H079 304 aa13.23□□□□□ -0.29
DUBR-204ENST00000490441 ADD3Q9UEY8 706 aaKnown RBP13.23□□□□□ -0.29
DUBR-204ENST00000490441 COL6A3P12111 3177 aa13.22□□□□□ -0.29
DUBR-204ENST00000490441 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.22□□□□□ -0.29
DUBR-204ENST00000490441 PTPDC1A2A3K4 754 aa13.22□□□□□ -0.29
DUBR-204ENST00000490441 ARVCFO00192 962 aa13.22□□□□□ -0.29
DUBR-204ENST00000490441 HIP1O00291 1037 aa13.22□□□□□ -0.29
DUBR-204ENST00000490441 TIMP1P01033 207 aa13.22□□□□□ -0.29
DUBR-204ENST00000490441 PDHBP11177 359 aa13.22□□□□□ -0.29
DUBR-204ENST00000490441 IRX5P78411 483 aaPredicted RBP13.22□□□□□ -0.29
DUBR-204ENST00000490441 BEX3Q00994 111 aa13.22□□□□□ -0.29
DUBR-204ENST00000490441 NUCB1Q02818 461 aa13.22□□□□□ -0.29
DUBR-204ENST00000490441 EEPD1Q7L9B9 569 aa13.22□□□□□ -0.29
DUBR-204ENST00000490441 TBC1D10CQ8IV04 446 aa13.22□□□□□ -0.29
DUBR-204ENST00000490441 PLEKHM2Q8IWE5 1019 aa13.22□□□□□ -0.29
DUBR-204ENST00000490441 FBXO16Q8IX29 292 aaPredicted RBP13.22□□□□□ -0.29
DUBR-204ENST00000490441 VTA1Q9NP79 307 aa13.22□□□□□ -0.29
DUBR-204ENST00000490441 ZNF213O14771 459 aa13.21□□□□□ -0.29
DUBR-204ENST00000490441 CABYRO75952 493 aa13.21□□□□□ -0.29
DUBR-204ENST00000490441 NT5C2P49902 561 aa13.21□□□□□ -0.29
DUBR-204ENST00000490441 CDK7P50613 346 aa13.21□□□□□ -0.29
DUBR-204ENST00000490441 PPIGQ13427 754 aaKnown RBP eCLIP13.21□□□□□ -0.29
DUBR-204ENST00000490441 BAATQ14032 418 aaPredicted RBP13.21□□□□□ -0.29
DUBR-204ENST00000490441 FSCN1Q16658 493 aaKnown RBP13.21□□□□□ -0.29
DUBR-204ENST00000490441 CCDC178Q5BJE1 867 aa13.21□□□□□ -0.29
DUBR-204ENST00000490441 IQSEC1Q6DN90 963 aa13.21□□□□□ -0.29
DUBR-204ENST00000490441 CWC27Q6UX04 472 aaKnown RBP13.21□□□□□ -0.29
DUBR-204ENST00000490441 CXCL17Q6UXB2 119 aa13.21□□□□□ -0.29
DUBR-204ENST00000490441 IQCA1Q86XH1 822 aa13.21□□□□□ -0.29
DUBR-204ENST00000490441 GUCD1Q96NT3 240 aa13.21□□□□□ -0.29
DUBR-204ENST00000490441 MPHOSPH6Q99547 160 aaKnown RBP13.21□□□□□ -0.29
DUBR-204ENST00000490441 OSBPL3Q9H4L5 887 aa13.21□□□□□ -0.29
DUBR-204ENST00000490441 TBX21Q9UL17 535 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms