RNA–Protein interactions for RNA: ENST00000490360.1

UPK3B-205, Transcript of uroplakin 3B, humanhuman

TSL 2

Gene UPK3B, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-205ENST00000490360 CNTN2Q02246 1040 aa23.47■■□□□ 1.35
UPK3B-205ENST00000490360 PPP4R3BQ5MIZ7 849 aa23.47■■□□□ 1.35
UPK3B-205ENST00000490360 FAM122AQ96E09 287 aa23.47■■□□□ 1.35
UPK3B-205ENST00000490360 A1CFQ9NQ94 594 aaKnown RBP23.47■■□□□ 1.35
UPK3B-205ENST00000490360 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.46■■□□□ 1.35
UPK3B-205ENST00000490360 ASTN1O14525 1302 aa23.46■■□□□ 1.35
UPK3B-205ENST00000490360 ZFYP08048 801 aaPredicted RBP23.46■■□□□ 1.35
UPK3B-205ENST00000490360 SUPT20HL2P0C7V6 817 aa23.46■■□□□ 1.35
UPK3B-205ENST00000490360 SLFN13Q68D06 897 aa23.46■■□□□ 1.35
UPK3B-205ENST00000490360 APPBP2Q92624 585 aa23.46■■□□□ 1.35
UPK3B-205ENST00000490360 LRRCC1Q9C099 1032 aa23.46■■□□□ 1.35
UPK3B-205ENST00000490360 PLIN4Q96Q06 1357 aa23.45■■□□□ 1.34
UPK3B-205ENST00000490360 DYNC1LI2O43237 492 aaPredicted RBP23.45■■□□□ 1.34
UPK3B-205ENST00000490360 PLA2G6O60733 806 aa23.45■■□□□ 1.34
UPK3B-205ENST00000490360 BMP1P13497 986 aa23.45■■□□□ 1.34
UPK3B-205ENST00000490360 TDO2P48775 406 aa23.45■■□□□ 1.34
UPK3B-205ENST00000490360 CCL23P55773 120 aa23.45■■□□□ 1.34
UPK3B-205ENST00000490360 HNRNPUQ00839 825 aaKnown RBP eCLIP23.45■■□□□ 1.34
UPK3B-205ENST00000490360 STK11IPQ8N1F8 1099 aa23.45■■□□□ 1.34
UPK3B-205ENST00000490360 KBTBD3Q8NAB2 608 aa23.45■■□□□ 1.34
UPK3B-205ENST00000490360 RNF146Q9NTX7 359 aa23.45■■□□□ 1.34
UPK3B-205ENST00000490360 GRIN2DO15399 1336 aa23.44■■□□□ 1.34
UPK3B-205ENST00000490360 UMODL1Q5DID0 1318 aa23.44■■□□□ 1.34
UPK3B-205ENST00000490360 SOWAHBA6NEL2 793 aa23.44■■□□□ 1.34
UPK3B-205ENST00000490360 TMEM232C9JQI7 657 aa23.44■■□□□ 1.34
UPK3B-205ENST00000490360 B4GALT4O60513 344 aa23.44■■□□□ 1.34
UPK3B-205ENST00000490360 ATP2A2P16615 1042 aaKnown RBP23.44■■□□□ 1.34
UPK3B-205ENST00000490360 POU3F3P20264 500 aaPredicted RBP23.44■■□□□ 1.34
UPK3B-205ENST00000490360 PDE4BQ07343 736 aa23.44■■□□□ 1.34
UPK3B-205ENST00000490360 NEDD1Q8NHV4 660 aa23.44■■□□□ 1.34
UPK3B-205ENST00000490360 STAG1Q8WVM7 1258 aa23.44■■□□□ 1.34
UPK3B-205ENST00000490360 GMCL1Q96IK5 515 aa23.44■■□□□ 1.34
UPK3B-205ENST00000490360 TRPV6Q9H1D0 765 aa23.44■■□□□ 1.34
UPK3B-205ENST00000490360 WNT8AQ9H1J5 351 aa23.44■■□□□ 1.34
UPK3B-205ENST00000490360 ECHDC1Q9NTX5 307 aa23.44■■□□□ 1.34
UPK3B-205ENST00000490360 REV3LO60673 3130 aa23.44■■□□□ 1.34
UPK3B-205ENST00000490360 GTPBP6O43824 516 aaPredicted RBP23.43■■□□□ 1.34
UPK3B-205ENST00000490360 SLC3A2P08195 630 aaKnown RBP23.43■■□□□ 1.34
UPK3B-205ENST00000490360 TSPY3P0CV98 308 aa23.43■■□□□ 1.34
UPK3B-205ENST00000490360 TSPY8P0CW00 308 aa23.43■■□□□ 1.34
UPK3B-205ENST00000490360 SMPD1P17405 629 aa23.43■■□□□ 1.34
UPK3B-205ENST00000490360 LRRFIP1Q32MZ4 808 aaKnown RBP23.43■■□□□ 1.34
UPK3B-205ENST00000490360 LRRC47Q8N1G4 583 aaKnown RBP23.43■■□□□ 1.34
UPK3B-205ENST00000490360 TRERF1Q96PN7 1200 aa23.43■■□□□ 1.34
UPK3B-205ENST00000490360 NACAP1Q9BZK3 213 aa23.43■■□□□ 1.34
UPK3B-205ENST00000490360 VTA1Q9NP79 307 aa23.43■■□□□ 1.34
UPK3B-205ENST00000490360 ARIH1Q9Y4X5 557 aaPredicted RBP23.43■■□□□ 1.34
UPK3B-205ENST00000490360 XIRP2A4UGR9 3374 aa23.43■■□□□ 1.34
UPK3B-205ENST00000490360 TCF20Q9UGU0 1960 aaKnown RBP23.42■■□□□ 1.34
UPK3B-205ENST00000490360 ZBBXA8MT70 800 aa23.42■■□□□ 1.34
UPK3B-205ENST00000490360 ERC2O15083 957 aa23.42■■□□□ 1.34
UPK3B-205ENST00000490360 APPP05067 770 aa23.42■■□□□ 1.34
UPK3B-205ENST00000490360 SLC1A4P43007 532 aa23.42■■□□□ 1.34
UPK3B-205ENST00000490360 RABGGTBP53611 331 aa23.42■■□□□ 1.34
UPK3B-205ENST00000490360 IKQ13123 557 aaPredicted RBP23.42■■□□□ 1.34
UPK3B-205ENST00000490360 TMEM67Q5HYA8 995 aa23.42■■□□□ 1.34
UPK3B-205ENST00000490360 OSBP2Q969R2 916 aa23.42■■□□□ 1.34
UPK3B-205ENST00000490360 GPATCH3Q96I76 525 aa23.42■■□□□ 1.34
UPK3B-205ENST00000490360 ALDH8A1Q9H2A2 487 aaPredicted RBP23.42■■□□□ 1.34
UPK3B-205ENST00000490360 RAPGEFL1Q9UHV5 662 aa23.42■■□□□ 1.34
UPK3B-205ENST00000490360 ISY1Q9ULR0 285 aaKnown RBP23.42■■□□□ 1.34
UPK3B-205ENST00000490360 ZNF536O15090 1300 aa23.41■■□□□ 1.34
UPK3B-205ENST00000490360 LOC102724159A0A0B4J2E5 919 aa23.41■■□□□ 1.34
UPK3B-205ENST00000490360 RNF113AO15541 343 aaKnown RBP23.41■■□□□ 1.34
UPK3B-205ENST00000490360 GPAA1O43292 621 aa23.41■■□□□ 1.34
UPK3B-205ENST00000490360 PRDM1O75626 825 aa23.41■■□□□ 1.34
UPK3B-205ENST00000490360 ACTN1P12814 892 aa23.41■■□□□ 1.34
UPK3B-205ENST00000490360 PWP2Q15269 919 aaKnown RBP23.41■■□□□ 1.34
UPK3B-205ENST00000490360 TAPT1Q6NXT6 567 aa23.41■■□□□ 1.34
UPK3B-205ENST00000490360 AGBL1Q96MI9 1066 aa23.41■■□□□ 1.34
UPK3B-205ENST00000490360 POLR3EQ9NVU0 708 aa23.41■■□□□ 1.34
UPK3B-205ENST00000490360 COG5Q9UP83 839 aa23.41■■□□□ 1.34
UPK3B-205ENST00000490360 LRRC37A2A6NM11 1700 aa23.4■■□□□ 1.34
UPK3B-205ENST00000490360 PATL2C9JE40 543 aaKnown RBP23.4■■□□□ 1.34
UPK3B-205ENST00000490360 ALAS1P13196 640 aa23.4■■□□□ 1.34
UPK3B-205ENST00000490360 RFC2P35250 354 aa23.4■■□□□ 1.34
UPK3B-205ENST00000490360 MICALL1Q8N3F8 863 aa23.4■■□□□ 1.34
UPK3B-205ENST00000490360 PHOSPHO2Q8TCD6 241 aa23.4■■□□□ 1.34
UPK3B-205ENST00000490360 EPB41L4AQ9HCS5 686 aaPredicted RBP23.4■■□□□ 1.34
UPK3B-205ENST00000490360 CYP39A1Q9NYL5 469 aa23.4■■□□□ 1.34
UPK3B-205ENST00000490360 SKIV2LQ15477 1246 aaKnown RBP23.39■■□□□ 1.33
UPK3B-205ENST00000490360 DUSP28Q4G0W2 176 aa23.39■■□□□ 1.33
UPK3B-205ENST00000490360 MORC4Q8TE76 937 aa23.39■■□□□ 1.33
UPK3B-205ENST00000490360 ADD3Q9UEY8 706 aaKnown RBP23.39■■□□□ 1.33
UPK3B-205ENST00000490360 PRRC2BQ5JSZ5 2229 aaKnown RBP23.39■■□□□ 1.33
UPK3B-205ENST00000490360 CPT1AP50416 773 aa23.38■■□□□ 1.33
UPK3B-205ENST00000490360 PSMC6P62333 389 aa23.38■■□□□ 1.33
UPK3B-205ENST00000490360 RCSD1Q6JBY9 416 aa23.38■■□□□ 1.33
UPK3B-205ENST00000490360 KIAA1211Q6ZU35 1233 aa23.38■■□□□ 1.33
UPK3B-205ENST00000490360 IFNL3Q8IZI9 196 aa23.38■■□□□ 1.33
UPK3B-205ENST00000490360 SCLYQ96I15 445 aa23.38■■□□□ 1.33
UPK3B-205ENST00000490360 SLC9A7Q96T83 725 aa23.38■■□□□ 1.33
UPK3B-205ENST00000490360 PDGFCQ9NRA1 345 aa23.38■■□□□ 1.33
UPK3B-205ENST00000490360 MYOGP15173 224 aa23.37■■□□□ 1.33
UPK3B-205ENST00000490360 TFAP4Q01664 338 aa23.37■■□□□ 1.33
UPK3B-205ENST00000490360 TFF2Q03403 129 aa23.37■■□□□ 1.33
UPK3B-205ENST00000490360 BRDTQ58F21 947 aaPredicted RBP23.37■■□□□ 1.33
UPK3B-205ENST00000490360 FBXO16Q8IX29 292 aaPredicted RBP23.37■■□□□ 1.33
UPK3B-205ENST00000490360 GPHNQ9NQX3 736 aaPredicted RBP23.37■■□□□ 1.33
UPK3B-205ENST00000490360 MTCH2Q9Y6C9 303 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms