RNA–Protein interactions for RNA: ENST00000490346.1

ECM1-205, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-205ENST00000490346 HOMER1Q86YM7 354 aa10.67□□□□□ -0.7
ECM1-205ENST00000490346 CMTR1Q8N1G2 835 aaKnown RBP10.67□□□□□ -0.7
ECM1-205ENST00000490346 FANCBQ8NB91 859 aa10.67□□□□□ -0.7
ECM1-205ENST00000490346 CLEC4DQ8WXI8 215 aa10.67□□□□□ -0.7
ECM1-205ENST00000490346 PIBF1Q8WXW3 757 aa10.67□□□□□ -0.7
ECM1-205ENST00000490346 BRF1Q92994 677 aa10.67□□□□□ -0.7
ECM1-205ENST00000490346 MTMR8Q96EF0 704 aa10.67□□□□□ -0.7
ECM1-205ENST00000490346 MAML3Q96JK9 1138 aa10.67□□□□□ -0.7
ECM1-205ENST00000490346 PIGSQ96S52 555 aa10.67□□□□□ -0.7
ECM1-205ENST00000490346 TM6SF1Q9BZW5 370 aa10.67□□□□□ -0.7
ECM1-205ENST00000490346 UNC93B1Q9H1C4 597 aa10.67□□□□□ -0.7
ECM1-205ENST00000490346 A1CFQ9NQ94 594 aaKnown RBP10.67□□□□□ -0.7
ECM1-205ENST00000490346 SLC5A4Q9NY91 659 aa10.67□□□□□ -0.7
ECM1-205ENST00000490346 PNMA2Q9UL42 364 aa10.67□□□□□ -0.7
ECM1-205ENST00000490346 PLXNA1Q9UIW2 1896 aa10.67□□□□□ -0.7
ECM1-205ENST00000490346 BAZ2BQ9UIF8 2168 aaKnown RBP10.67□□□□□ -0.7
ECM1-205ENST00000490346 GOLGA8AA7E2F4 631 aa10.66□□□□□ -0.7
ECM1-205ENST00000490346 GOLGA8BA8MQT2 603 aa10.66□□□□□ -0.7
ECM1-205ENST00000490346 ZBTB5O15062 677 aa10.66□□□□□ -0.7
ECM1-205ENST00000490346 PPP1R11O60927 126 aaPredicted RBP10.66□□□□□ -0.7
ECM1-205ENST00000490346 PRKAR2AP13861 404 aaKnown RBP10.66□□□□□ -0.7
ECM1-205ENST00000490346 CACNB2Q08289 660 aaPredicted RBP10.66□□□□□ -0.7
ECM1-205ENST00000490346 RTN1Q16799 776 aa10.66□□□□□ -0.7
ECM1-205ENST00000490346 MAP3K21Q5TCX8 1036 aa10.66□□□□□ -0.7
ECM1-205ENST00000490346 MFSD14CQ5VZR4 134 aa10.66□□□□□ -0.7
ECM1-205ENST00000490346 OLFML2BQ68BL8 750 aa10.66□□□□□ -0.7
ECM1-205ENST00000490346 TMTC3Q6ZXV5 915 aa10.66□□□□□ -0.7
ECM1-205ENST00000490346 SRBD1Q8N5C6 995 aaKnown RBP10.66□□□□□ -0.7
ECM1-205ENST00000490346 LZTS2Q9BRK4 669 aa10.66□□□□□ -0.7
ECM1-205ENST00000490346 LARP6Q9BRS8 491 aaKnown RBP10.66□□□□□ -0.7
ECM1-205ENST00000490346 TMEM106CQ9BVX2 250 aa10.66□□□□□ -0.7
ECM1-205ENST00000490346 SPZ1Q9BXG8 430 aa10.66□□□□□ -0.7
ECM1-205ENST00000490346 AGXT2Q9BYV1 514 aa10.66□□□□□ -0.7
ECM1-205ENST00000490346 RNF208Q9H0X6 261 aa10.66□□□□□ -0.7
ECM1-205ENST00000490346 DIS3Q9Y2L1 958 aaKnown RBP10.66□□□□□ -0.7
ECM1-205ENST00000490346 PFASO15067 1338 aa10.65□□□□□ -0.7
ECM1-205ENST00000490346 ABCB11O95342 1321 aa10.65□□□□□ -0.7
ECM1-205ENST00000490346 PTPDC1A2A3K4 754 aa10.65□□□□□ -0.7
ECM1-205ENST00000490346 POTEFA5A3E0 1075 aa10.65□□□□□ -0.7
ECM1-205ENST00000490346 POTEB2H3BUK9 544 aa10.65□□□□□ -0.7
ECM1-205ENST00000490346 CNTN2Q02246 1040 aa10.65□□□□□ -0.7
ECM1-205ENST00000490346 BAATQ14032 418 aaPredicted RBP10.65□□□□□ -0.7
ECM1-205ENST00000490346 TOB2Q14106 344 aaPredicted RBP10.65□□□□□ -0.7
ECM1-205ENST00000490346 IFFO2Q5TF58 517 aa10.65□□□□□ -0.7
ECM1-205ENST00000490346 FBXL16Q8N461 479 aa10.65□□□□□ -0.7
ECM1-205ENST00000490346 CCDC82Q8N4S0 544 aa10.65□□□□□ -0.7
ECM1-205ENST00000490346 FGD4Q96M96 766 aa10.65□□□□□ -0.7
ECM1-205ENST00000490346 PURBQ96QR8 312 aaKnown RBP10.65□□□□□ -0.7
ECM1-205ENST00000490346 AMNQ9BXJ7 453 aa10.65□□□□□ -0.7
ECM1-205ENST00000490346 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.65□□□□□ -0.7
ECM1-205ENST00000490346 PDRG1Q9NUG6 133 aa10.65□□□□□ -0.7
ECM1-205ENST00000490346 RBM28Q9NW13 759 aaKnown RBP10.65□□□□□ -0.7
ECM1-205ENST00000490346 CYP39A1Q9NYL5 469 aa10.65□□□□□ -0.7
ECM1-205ENST00000490346 LCTP09848 1927 aa10.64□□□□□ -0.71
ECM1-205ENST00000490346 RPTORQ8N122 1335 aa10.64□□□□□ -0.71
ECM1-205ENST00000490346 KIAA0100Q14667 2235 aaKnown RBP10.64□□□□□ -0.71
ECM1-205ENST00000490346 PNMA6FA0A0J9YX94 578 aa10.64□□□□□ -0.71
ECM1-205ENST00000490346 hCG_1642624A0A1W2PR95 340 aa10.64□□□□□ -0.71
ECM1-205ENST00000490346 SOWAHBA6NEL2 793 aa10.64□□□□□ -0.71
ECM1-205ENST00000490346 IGHA2P01877 340 aa10.64□□□□□ -0.71
ECM1-205ENST00000490346 CALML3P27482 149 aa10.64□□□□□ -0.71
ECM1-205ENST00000490346 SMARCA1P28370 1054 aa10.64□□□□□ -0.71
ECM1-205ENST00000490346 CDC27P30260 824 aa10.64□□□□□ -0.71
ECM1-205ENST00000490346 CCND3P30281 292 aaPredicted RBP10.64□□□□□ -0.71
ECM1-205ENST00000490346 METAP2P50579 478 aaKnown RBP eCLIP10.64□□□□□ -0.71
ECM1-205ENST00000490346 RCAN1P53805 252 aa10.64□□□□□ -0.71
ECM1-205ENST00000490346 PRAMEF19Q5SWL8 479 aa10.64□□□□□ -0.71
ECM1-205ENST00000490346 SLC30A10Q6XR72 485 aa10.64□□□□□ -0.71
ECM1-205ENST00000490346 RNF207Q6ZRF8 634 aa10.64□□□□□ -0.71
ECM1-205ENST00000490346 FAM133AQ8N9E0 248 aa10.64□□□□□ -0.71
ECM1-205ENST00000490346 TRPV1Q8NER1 839 aa10.64□□□□□ -0.71
ECM1-205ENST00000490346 TBC1D5Q92609 795 aa10.64□□□□□ -0.71
ECM1-205ENST00000490346 RRP36Q96EU6 259 aaKnown RBP10.64□□□□□ -0.71
ECM1-205ENST00000490346 IL17RAQ96F46 866 aa10.64□□□□□ -0.71
ECM1-205ENST00000490346 TINF2Q9BSI4 451 aa10.64□□□□□ -0.71
ECM1-205ENST00000490346 HMX1Q9NP08 348 aaPredicted RBP10.64□□□□□ -0.71
ECM1-205ENST00000490346 FAM217BQ9NTX9 383 aaPredicted RBP10.64□□□□□ -0.71
ECM1-205ENST00000490346 SEC63Q9UGP8 760 aaKnown RBP10.64□□□□□ -0.71
ECM1-205ENST00000490346 MRPL11Q9Y3B7 192 aaKnown RBP10.64□□□□□ -0.71
ECM1-205ENST00000490346 PCDHA1Q9Y5I3 950 aa10.64□□□□□ -0.71
ECM1-205ENST00000490346 RBBP6Q7Z6E9 1792 aaKnown RBP10.64□□□□□ -0.71
ECM1-205ENST00000490346 ASTN1O14525 1302 aa10.63□□□□□ -0.71
ECM1-205ENST00000490346 CNTNAP5Q8WYK1 1306 aa10.63□□□□□ -0.71
ECM1-205ENST00000490346 GJB1P08034 283 aa10.63□□□□□ -0.71
ECM1-205ENST00000490346 CYBAP13498 195 aa10.63□□□□□ -0.71
ECM1-205ENST00000490346 EN2P19622 333 aaPredicted RBP10.63□□□□□ -0.71
ECM1-205ENST00000490346 ADD1P35611 737 aaKnown RBP10.63□□□□□ -0.71
ECM1-205ENST00000490346 EVCP57679 992 aa10.63□□□□□ -0.71
ECM1-205ENST00000490346 RPS6P62753 249 aaKnown RBP10.63□□□□□ -0.71
ECM1-205ENST00000490346 FUT2Q10981 343 aa10.63□□□□□ -0.71
ECM1-205ENST00000490346 ZNF467Q7Z7K2 595 aaPredicted RBP10.63□□□□□ -0.71
ECM1-205ENST00000490346 DEFB118Q96PH6 123 aa10.63□□□□□ -0.71
ECM1-205ENST00000490346 C22orf23Q9BZE7 217 aa10.63□□□□□ -0.71
ECM1-205ENST00000490346 PAK6Q9NQU5 681 aaPredicted RBP10.63□□□□□ -0.71
ECM1-205ENST00000490346 DDX49Q9Y6V7 483 aaKnown RBP10.63□□□□□ -0.71
ECM1-205ENST00000490346 BRCA2P51587 3418 aa10.63□□□□□ -0.71
ECM1-205ENST00000490346 NID2Q14112 1375 aa10.63□□□□□ -0.71
ECM1-205ENST00000490346 MCM3APO60318 1980 aa10.63□□□□□ -0.71
ECM1-205ENST00000490346 SYNGAP1Q96PV0 1343 aa10.62□□□□□ -0.71
ECM1-205ENST00000490346 CCDC196A0A1B0GTZ2 297 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms