RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 PARP2Q9UGN5 583 aa4.37□□□□□ -1.71
CRNKL1-203ENST00000490258 CYP8B1Q9UNU6 501 aa4.37□□□□□ -1.71
CRNKL1-203ENST00000490258 PCDHB5Q9Y5E4 795 aa4.37□□□□□ -1.71
CRNKL1-203ENST00000490258 CENPJQ9HC77 1338 aaPredicted RBP4.37□□□□□ -1.71
CRNKL1-203ENST00000490258 A0A1W2PP64 1363 aa4.37□□□□□ -1.71
CRNKL1-203ENST00000490258 NINLQ9Y2I6 1382 aa4.37□□□□□ -1.71
CRNKL1-203ENST00000490258 PPIP5K1Q6PFW1 1433 aa4.37□□□□□ -1.71
CRNKL1-203ENST00000490258 LRRC7Q96NW7 1537 aa4.36□□□□□ -1.71
CRNKL1-203ENST00000490258 RGPD1P0DJD0 1748 aa4.36□□□□□ -1.71
CRNKL1-203ENST00000490258 DCDC2CA8MYV0 355 aa4.36□□□□□ -1.71
CRNKL1-203ENST00000490258 ETV2O00321 342 aaPredicted RBP4.36□□□□□ -1.71
CRNKL1-203ENST00000490258 RRP9O43818 475 aaKnown RBP4.36□□□□□ -1.71
CRNKL1-203ENST00000490258 FRAT2O75474 233 aaPredicted RBP4.36□□□□□ -1.71
CRNKL1-203ENST00000490258 EOMESO95936 686 aa4.36□□□□□ -1.71
CRNKL1-203ENST00000490258 CELA3BP08861 270 aa4.36□□□□□ -1.71
CRNKL1-203ENST00000490258 TFE3P19532 575 aaPredicted RBP4.36□□□□□ -1.71
CRNKL1-203ENST00000490258 EIF4BP23588 611 aaKnown RBP4.36□□□□□ -1.71
CRNKL1-203ENST00000490258 TNNT2P45379 298 aaPredicted RBP4.36□□□□□ -1.71
CRNKL1-203ENST00000490258 ST13P50502 369 aaKnown RBP4.36□□□□□ -1.71
CRNKL1-203ENST00000490258 TTBK2Q6IQ55 1244 aa4.36□□□□□ -1.71
CRNKL1-203ENST00000490258 C12orf40Q86WS4 652 aa4.36□□□□□ -1.71
CRNKL1-203ENST00000490258 ZNF428Q96B54 188 aa4.36□□□□□ -1.71
CRNKL1-203ENST00000490258 PLPPR2Q96GM1 343 aa4.36□□□□□ -1.71
CRNKL1-203ENST00000490258 FAM161BQ96MY7 647 aa4.36□□□□□ -1.71
CRNKL1-203ENST00000490258 RRAGDQ9NQL2 400 aaPredicted RBP4.36□□□□□ -1.71
CRNKL1-203ENST00000490258 ISY1Q9ULR0 285 aaKnown RBP4.36□□□□□ -1.71
CRNKL1-203ENST00000490258 USP31Q70CQ4 1352 aa4.36□□□□□ -1.71
CRNKL1-203ENST00000490258 NPC1L1Q9UHC9 1359 aa4.36□□□□□ -1.71
CRNKL1-203ENST00000490258 NRAPQ86VF7 1730 aa4.35□□□□□ -1.71
CRNKL1-203ENST00000490258 FANCGO15287 622 aa4.35□□□□□ -1.71
CRNKL1-203ENST00000490258 LIG3P49916 1009 aa4.35□□□□□ -1.71
CRNKL1-203ENST00000490258 NKG7Q16617 165 aa4.35□□□□□ -1.71
CRNKL1-203ENST00000490258 GLIPR1L2Q4G1C9 344 aa4.35□□□□□ -1.71
CRNKL1-203ENST00000490258 TRMT2AQ8IZ69 625 aaKnown RBP4.35□□□□□ -1.71
CRNKL1-203ENST00000490258 PHC3Q8NDX5 983 aa4.35□□□□□ -1.71
CRNKL1-203ENST00000490258 PMFBP1Q8TBY8 1022 aa4.35□□□□□ -1.71
CRNKL1-203ENST00000490258 RHOVQ96L33 236 aa4.35□□□□□ -1.71
CRNKL1-203ENST00000490258 MKNK2Q9HBH9 465 aa4.35□□□□□ -1.71
CRNKL1-203ENST00000490258 PCOLCE2Q9UKZ9 415 aa4.35□□□□□ -1.71
CRNKL1-203ENST00000490258 CSADQ9Y600 493 aa4.35□□□□□ -1.71
CRNKL1-203ENST00000490258 MAPK8IP3Q9UPT6 1336 aa4.35□□□□□ -1.71
CRNKL1-203ENST00000490258 TECPR2O15040 1411 aa4.35□□□□□ -1.71
CRNKL1-203ENST00000490258 PTCH1Q13635 1447 aa4.35□□□□□ -1.71
CRNKL1-203ENST00000490258 ADGRL3Q9HAR2 1447 aa4.35□□□□□ -1.71
CRNKL1-203ENST00000490258 FAM208AQ9UK61 1670 aaKnown RBP4.35□□□□□ -1.71
CRNKL1-203ENST00000490258 TOGARAM1Q9Y4F4 1720 aa4.35□□□□□ -1.71
CRNKL1-203ENST00000490258 TMEM265A0A087WTH1 108 aa4.34□□□□□ -1.71
CRNKL1-203ENST00000490258 AKAP8O43823 692 aaKnown RBP4.34□□□□□ -1.71
CRNKL1-203ENST00000490258 SLITRK5O94991 958 aa4.34□□□□□ -1.71
CRNKL1-203ENST00000490258 GARTP22102 1010 aa4.34□□□□□ -1.71
CRNKL1-203ENST00000490258 SEPT6Q14141 434 aa4.34□□□□□ -1.71
CRNKL1-203ENST00000490258 MRPL58Q14197 206 aaKnown RBP4.34□□□□□ -1.71
CRNKL1-203ENST00000490258 SPACA3Q8IXA5 215 aa4.34□□□□□ -1.71
CRNKL1-203ENST00000490258 NGEFQ8N5V2 710 aa4.34□□□□□ -1.71
CRNKL1-203ENST00000490258 TOP6BLQ8N6T0 577 aa4.34□□□□□ -1.71
CRNKL1-203ENST00000490258 NOC4LQ9BVI4 516 aaKnown RBP4.34□□□□□ -1.71
CRNKL1-203ENST00000490258 SLC12A5Q9H2X9 1139 aa4.34□□□□□ -1.71
CRNKL1-203ENST00000490258 WDR26Q9H7D7 661 aa4.34□□□□□ -1.71
CRNKL1-203ENST00000490258 C14orf93Q9H972 538 aaKnown RBP4.34□□□□□ -1.71
CRNKL1-203ENST00000490258 PIDD1Q9HB75 910 aa4.34□□□□□ -1.71
CRNKL1-203ENST00000490258 DCP1AQ9NPI6 582 aaPredicted RBP4.34□□□□□ -1.71
CRNKL1-203ENST00000490258 POGKQ9P215 609 aa4.34□□□□□ -1.71
CRNKL1-203ENST00000490258 PCDHA4Q9UN74 947 aa4.34□□□□□ -1.71
CRNKL1-203ENST00000490258 TTF2Q9UNY4 1162 aaKnown RBP4.34□□□□□ -1.71
CRNKL1-203ENST00000490258 COL3A1P02461 1466 aaPredicted RBP4.34□□□□□ -1.71
CRNKL1-203ENST00000490258 C5P01031 1676 aa4.34□□□□□ -1.71
CRNKL1-203ENST00000490258 COL18A1P39060 1754 aa4.34□□□□□ -1.71
CRNKL1-203ENST00000490258 DOT1LQ8TEK3 1739 aa4.33□□□□□ -1.72
CRNKL1-203ENST00000490258 NFAT5O94916 1531 aa4.33□□□□□ -1.72
CRNKL1-203ENST00000490258 MST1RQ04912 1400 aa4.33□□□□□ -1.72
CRNKL1-203ENST00000490258 NCOA3Q9Y6Q9 1424 aa4.33□□□□□ -1.72
CRNKL1-203ENST00000490258 TMEM94Q12767 1356 aa4.33□□□□□ -1.72
CRNKL1-203ENST00000490258 FAM221AA4D161 298 aa4.33□□□□□ -1.72
CRNKL1-203ENST00000490258 LRRC14Q15048 493 aa4.33□□□□□ -1.72
CRNKL1-203ENST00000490258 CCDC85BQ15834 202 aaPredicted RBP4.33□□□□□ -1.72
CRNKL1-203ENST00000490258 NKPD1Q17RQ9 610 aa4.33□□□□□ -1.72
CRNKL1-203ENST00000490258 C20orf194Q5TEA3 1177 aa4.33□□□□□ -1.72
CRNKL1-203ENST00000490258 C22orf34Q6ZV56 151 aa4.33□□□□□ -1.72
CRNKL1-203ENST00000490258 ARMCX6Q7L4S7 300 aa4.33□□□□□ -1.72
CRNKL1-203ENST00000490258 SKAP1Q86WV1 359 aa4.33□□□□□ -1.72
CRNKL1-203ENST00000490258 NME9Q86XW9 330 aa4.33□□□□□ -1.72
CRNKL1-203ENST00000490258 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.33□□□□□ -1.72
CRNKL1-203ENST00000490258 EPB41L4BQ9H329 900 aa4.33□□□□□ -1.72
CRNKL1-203ENST00000490258 KCNK12Q9HB15 430 aa4.33□□□□□ -1.72
CRNKL1-203ENST00000490258 CBX8Q9HC52 389 aa4.33□□□□□ -1.72
CRNKL1-203ENST00000490258 KCNQ5Q9NR82 932 aa4.33□□□□□ -1.72
CRNKL1-203ENST00000490258 TLR6Q9Y2C9 796 aa4.33□□□□□ -1.72
CRNKL1-203ENST00000490258 CASZ1Q86V15 1759 aa4.32□□□□□ -1.72
CRNKL1-203ENST00000490258 CGNL1Q0VF96 1302 aa4.32□□□□□ -1.72
CRNKL1-203ENST00000490258 IGF2BP3O00425 579 aaKnown RBP eCLIP4.32□□□□□ -1.72
CRNKL1-203ENST00000490258 PLIN1O60240 522 aa4.32□□□□□ -1.72
CRNKL1-203ENST00000490258 ZP2Q05996 745 aa4.32□□□□□ -1.72
CRNKL1-203ENST00000490258 SLFN5Q08AF3 891 aa4.32□□□□□ -1.72
CRNKL1-203ENST00000490258 BECN1Q14457 450 aa4.32□□□□□ -1.72
CRNKL1-203ENST00000490258 WIPI1Q5MNZ9 446 aaPredicted RBP4.32□□□□□ -1.72
CRNKL1-203ENST00000490258 ERMP1Q7Z2K6 904 aa4.32□□□□□ -1.72
CRNKL1-203ENST00000490258 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.32□□□□□ -1.72
CRNKL1-203ENST00000490258 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.32□□□□□ -1.72
CRNKL1-203ENST00000490258 MARCH10Q8NA82 808 aaPredicted RBP4.32□□□□□ -1.72
CRNKL1-203ENST00000490258 ORAI2Q96SN7 254 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms