RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 BEND3Q5T5X7 828 aa9.67□□□□□ -0.86
LSAMP-205ENST00000490035 GPBP1Q86WP2 473 aa9.67□□□□□ -0.86
LSAMP-205ENST00000490035 CAPS2Q9BXY5 557 aa9.67□□□□□ -0.86
LSAMP-205ENST00000490035 BTG4Q9NY30 223 aa9.67□□□□□ -0.86
LSAMP-205ENST00000490035 PALM3A6NDB9 673 aaPredicted RBP9.67□□□□□ -0.86
LSAMP-205ENST00000490035 IPO5O00410 1097 aaKnown RBP9.67□□□□□ -0.86
LSAMP-205ENST00000490035 MED7O43513 233 aa9.67□□□□□ -0.86
LSAMP-205ENST00000490035 CCDC13Q8IYE1 715 aa9.67□□□□□ -0.86
LSAMP-205ENST00000490035 CACTINQ8WUQ7 758 aaKnown RBP9.67□□□□□ -0.86
LSAMP-205ENST00000490035 WDR11Q9BZH6 1224 aa9.67□□□□□ -0.86
LSAMP-205ENST00000490035 EPN1Q9Y6I3 576 aaPredicted RBP9.67□□□□□ -0.86
LSAMP-205ENST00000490035 NCAPD2Q15021 1401 aa9.67□□□□□ -0.86
LSAMP-205ENST00000490035 PCCAP05165 728 aaPredicted RBP9.67□□□□□ -0.86
LSAMP-205ENST00000490035 RPS8P62241 208 aaKnown RBP9.67□□□□□ -0.86
LSAMP-205ENST00000490035 ZSCAN26Q16670 478 aa9.67□□□□□ -0.86
LSAMP-205ENST00000490035 FAM227BQ96M60 508 aa9.67□□□□□ -0.86
LSAMP-205ENST00000490035 NRBP2Q9NSY0 501 aa9.67□□□□□ -0.86
LSAMP-205ENST00000490035 RPN1P04843 607 aaKnown RBP9.67□□□□□ -0.86
LSAMP-205ENST00000490035 MFAP3P55082 362 aa9.67□□□□□ -0.86
LSAMP-205ENST00000490035 IFNL3Q8IZI9 196 aa9.67□□□□□ -0.86
LSAMP-205ENST00000490035 HELBQ8NG08 1087 aaPredicted RBP9.67□□□□□ -0.86
LSAMP-205ENST00000490035 SART1O43290 800 aaKnown RBP9.67□□□□□ -0.86
LSAMP-205ENST00000490035 ATF2P15336 505 aa9.67□□□□□ -0.86
LSAMP-205ENST00000490035 KRT39Q6A163 491 aa9.67□□□□□ -0.86
LSAMP-205ENST00000490035 EFCAB13Q8IY85 973 aa9.67□□□□□ -0.86
LSAMP-205ENST00000490035 CHMP2AO43633 222 aa9.67□□□□□ -0.86
LSAMP-205ENST00000490035 MYCLP12524 364 aaPredicted RBP9.67□□□□□ -0.86
LSAMP-205ENST00000490035 EIF4A1P60842 406 aaKnown RBP9.67□□□□□ -0.86
LSAMP-205ENST00000490035 ZNF449Q6P9G9 518 aa9.67□□□□□ -0.86
LSAMP-205ENST00000490035 TRIM56Q9BRZ2 755 aaKnown RBP9.67□□□□□ -0.86
LSAMP-205ENST00000490035 TAB2Q9NYJ8 693 aa9.67□□□□□ -0.86
LSAMP-205ENST00000490035 RIMBP2O15034 1052 aa9.66□□□□□ -0.86
LSAMP-205ENST00000490035 IGSF3O75054 1194 aa9.66□□□□□ -0.86
LSAMP-205ENST00000490035 H2AFZP0C0S5 128 aa9.66□□□□□ -0.86
LSAMP-205ENST00000490035 CD19P15391 556 aa9.66□□□□□ -0.86
LSAMP-205ENST00000490035 H2AFVQ71UI9 128 aa9.66□□□□□ -0.86
LSAMP-205ENST00000490035 FNBP4Q8N3X1 1017 aaPredicted RBP9.66□□□□□ -0.86
LSAMP-205ENST00000490035 ATP6V0A1Q93050 837 aa9.66□□□□□ -0.86
LSAMP-205ENST00000490035 PLIN2Q99541 437 aa9.66□□□□□ -0.86
LSAMP-205ENST00000490035 CAPN9O14815 690 aa9.66□□□□□ -0.86
LSAMP-205ENST00000490035 TTC4O95801 387 aa9.66□□□□□ -0.86
LSAMP-205ENST00000490035 ARHGEF18Q6ZSZ5 1173 aa9.66□□□□□ -0.86
LSAMP-205ENST00000490035 RNF168Q8IYW5 571 aaPredicted RBP9.66□□□□□ -0.86
LSAMP-205ENST00000490035 PFKFB1P16118 471 aa9.66□□□□□ -0.86
LSAMP-205ENST00000490035 ALS2CLQ60I27 953 aa9.66□□□□□ -0.86
LSAMP-205ENST00000490035 ADCY8P40145 1251 aa9.66□□□□□ -0.86
LSAMP-205ENST00000490035 EPHB4P54760 987 aa9.66□□□□□ -0.86
LSAMP-205ENST00000490035 RAB44Q7Z6P3 723 aaPredicted RBP9.66□□□□□ -0.86
LSAMP-205ENST00000490035 ANKRD35Q8N283 1001 aa9.66□□□□□ -0.86
LSAMP-205ENST00000490035 WHAMMQ8TF30 809 aa9.66□□□□□ -0.86
LSAMP-205ENST00000490035 ANKARQ7Z5J8 1434 aa9.66□□□□□ -0.86
LSAMP-205ENST00000490035 KCNK3O14649 394 aa9.66□□□□□ -0.86
LSAMP-205ENST00000490035 ANKRD20A4Q4UJ75 823 aa9.66□□□□□ -0.86
LSAMP-205ENST00000490035 ANKRD20A8PQ5CZ79 823 aa9.66□□□□□ -0.86
LSAMP-205ENST00000490035 ANKRD20A2Q5SQ80 823 aa9.66□□□□□ -0.86
LSAMP-205ENST00000490035 ANKRD20A1Q5TYW2 823 aa9.66□□□□□ -0.86
LSAMP-205ENST00000490035 ATP8B3O60423 1300 aa9.66□□□□□ -0.86
LSAMP-205ENST00000490035 FBXO11Q86XK2 927 aa9.66□□□□□ -0.86
LSAMP-205ENST00000490035 LARGE2Q8N3Y3 721 aa9.66□□□□□ -0.86
LSAMP-205ENST00000490035 LRRC8CQ8TDW0 803 aa9.66□□□□□ -0.86
LSAMP-205ENST00000490035 SLF1Q9BQI6 1058 aa9.66□□□□□ -0.86
LSAMP-205ENST00000490035 COPRSQ9NQ92 184 aa9.66□□□□□ -0.86
LSAMP-205ENST00000490035 ADD3Q9UEY8 706 aaKnown RBP9.66□□□□□ -0.86
LSAMP-205ENST00000490035 ORC6Q9Y5N6 252 aa9.66□□□□□ -0.86
LSAMP-205ENST00000490035 OATP04181 439 aa9.66□□□□□ -0.86
LSAMP-205ENST00000490035 ME3Q16798 604 aa9.66□□□□□ -0.86
LSAMP-205ENST00000490035 CCDC93Q567U6 631 aa9.66□□□□□ -0.86
LSAMP-205ENST00000490035 TTLL7Q6ZT98 887 aa9.66□□□□□ -0.86
LSAMP-205ENST00000490035 VPS37BQ9H9H4 285 aa9.66□□□□□ -0.86
LSAMP-205ENST00000490035 PPP2R2CQ9Y2T4 447 aa9.66□□□□□ -0.86
LSAMP-205ENST00000490035 EXOC3L4Q17RC7 722 aa9.65□□□□□ -0.86
LSAMP-205ENST00000490035 FBXO18Q8NFZ0 1043 aa9.65□□□□□ -0.86
LSAMP-205ENST00000490035 SUCLG2Q96I99 432 aa9.65□□□□□ -0.86
LSAMP-205ENST00000490035 FAM96AQ9H5X1 160 aa9.65□□□□□ -0.86
LSAMP-205ENST00000490035 FGFR1OP2Q9NVK5 253 aa9.65□□□□□ -0.86
LSAMP-205ENST00000490035 ANAPC5Q9UJX4 755 aa9.65□□□□□ -0.86
LSAMP-205ENST00000490035 CDK12Q9NYV4 1490 aaPredicted RBP9.65□□□□□ -0.86
LSAMP-205ENST00000490035 WDR46O15213 610 aaKnown RBP9.65□□□□□ -0.86
LSAMP-205ENST00000490035 TPH2Q8IWU9 490 aa9.65□□□□□ -0.86
LSAMP-205ENST00000490035 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.65□□□□□ -0.86
LSAMP-205ENST00000490035 NLRP7Q8WX94 980 aa9.65□□□□□ -0.86
LSAMP-205ENST00000490035 A6NJR5 290 aa9.65□□□□□ -0.86
LSAMP-205ENST00000490035 FKBP3Q00688 224 aaKnown RBP9.65□□□□□ -0.86
LSAMP-205ENST00000490035 PNMA1Q8ND90 353 aa9.65□□□□□ -0.86
LSAMP-205ENST00000490035 PHKBQ93100 1093 aa9.65□□□□□ -0.86
LSAMP-205ENST00000490035 CFBP00751 764 aa9.65□□□□□ -0.86
LSAMP-205ENST00000490035 PSMC2P35998 433 aaKnown RBP9.65□□□□□ -0.86
LSAMP-205ENST00000490035 PPARGP37231 505 aaPredicted RBP9.65□□□□□ -0.86
LSAMP-205ENST00000490035 KLHL7Q8IXQ5 586 aa9.65□□□□□ -0.86
LSAMP-205ENST00000490035 NRBF2Q96F24 287 aa9.65□□□□□ -0.86
LSAMP-205ENST00000490035 TTC25Q96NG3 672 aa9.65□□□□□ -0.86
LSAMP-205ENST00000490035 CDC23Q9UJX2 597 aa9.65□□□□□ -0.86
LSAMP-205ENST00000490035 IQGAP3Q86VI3 1631 aa9.65□□□□□ -0.86
LSAMP-205ENST00000490035 RUBCNQ92622 972 aa9.65□□□□□ -0.86
LSAMP-205ENST00000490035 VPS54Q9P1Q0 977 aa9.65□□□□□ -0.86
LSAMP-205ENST00000490035 NSFP46459 744 aaKnown RBP9.65□□□□□ -0.87
LSAMP-205ENST00000490035 USP14P54578 494 aa9.65□□□□□ -0.87
LSAMP-205ENST00000490035 ARL6IP4Q66PJ3 421 aaKnown RBP9.65□□□□□ -0.87
LSAMP-205ENST00000490035 SKAP1Q86WV1 359 aa9.65□□□□□ -0.87
LSAMP-205ENST00000490035 CNKSR1Q969H4 720 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms