RNA–Protein interactions for RNA: ENST00000489907.2

SMG5-205, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG5, Length 535 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-205ENST00000489907 TNFAIP2Q03169 654 aa9.7□□□□□ -0.86
SMG5-205ENST00000489907 PPIGQ13427 754 aaKnown RBP eCLIP9.7□□□□□ -0.864e-7■■□□□ 11.6
SMG5-205ENST00000489907 MUM1L1Q5H9M0 696 aa9.7□□□□□ -0.86
SMG5-205ENST00000489907 ZMYM1Q5SVZ6 1142 aa9.7□□□□□ -0.86
SMG5-205ENST00000489907 CXCL17Q6UXB2 119 aa9.7□□□□□ -0.86
SMG5-205ENST00000489907 RASGRP2Q7LDG7 609 aa9.7□□□□□ -0.86
SMG5-205ENST00000489907 EXOC6Q8TAG9 804 aa9.7□□□□□ -0.86
SMG5-205ENST00000489907 OTUD7AQ8TE49 926 aaPredicted RBP9.7□□□□□ -0.86
SMG5-205ENST00000489907 STAG1Q8WVM7 1258 aa9.7□□□□□ -0.86
SMG5-205ENST00000489907 HERVK_113Q902F9 699 aa9.7□□□□□ -0.86
SMG5-205ENST00000489907 PURBQ96QR8 312 aaKnown RBP9.7□□□□□ -0.86
SMG5-205ENST00000489907 CHMP4BQ9H444 224 aaKnown RBP9.7□□□□□ -0.86
SMG5-205ENST00000489907 IL23AQ9NPF7 189 aa9.7□□□□□ -0.86
SMG5-205ENST00000489907 SALL3Q9BXA9 1300 aa9.7□□□□□ -0.86
SMG5-205ENST00000489907 FGRP09769 529 aa9.69□□□□□ -0.86
SMG5-205ENST00000489907 MCCP23508 829 aa9.69□□□□□ -0.86
SMG5-205ENST00000489907 TDO2P48775 406 aa9.69□□□□□ -0.86
SMG5-205ENST00000489907 STAT2P52630 851 aa9.69□□□□□ -0.86
SMG5-205ENST00000489907 IRX6P78412 446 aaPredicted RBP9.69□□□□□ -0.86
SMG5-205ENST00000489907 PPARAQ07869 468 aa9.69□□□□□ -0.86
SMG5-205ENST00000489907 PTPRSQ13332 1948 aa9.69□□□□□ -0.86
SMG5-205ENST00000489907 TJAP1Q5JTD0 557 aa9.69□□□□□ -0.86
SMG5-205ENST00000489907 AKNAD1Q5T1N1 836 aa9.69□□□□□ -0.86
SMG5-205ENST00000489907 ERICH6BQ5W0A0 696 aa9.69□□□□□ -0.86
SMG5-205ENST00000489907 RCSD1Q6JBY9 416 aa9.69□□□□□ -0.86
SMG5-205ENST00000489907 TMEM199Q8N511 208 aa9.69□□□□□ -0.86
SMG5-205ENST00000489907 SYMPKQ92797 1274 aaKnown RBP9.69□□□□□ -0.86
SMG5-205ENST00000489907 TRERF1Q96PN7 1200 aa9.69□□□□□ -0.86
SMG5-205ENST00000489907 PPP1R12CQ9BZL4 782 aa9.69□□□□□ -0.86
SMG5-205ENST00000489907 WNT8AQ9H1J5 351 aa9.69□□□□□ -0.86
SMG5-205ENST00000489907 PRDM12Q9H4Q4 367 aa9.69□□□□□ -0.86
SMG5-205ENST00000489907 ACAD9Q9H845 621 aa9.69□□□□□ -0.86
SMG5-205ENST00000489907 HOMER2Q9NSB8 354 aa9.69□□□□□ -0.86
SMG5-205ENST00000489907 RNF146Q9NTX7 359 aa9.69□□□□□ -0.86
SMG5-205ENST00000489907 CYP39A1Q9NYL5 469 aa9.69□□□□□ -0.86
SMG5-205ENST00000489907 PRR12Q9ULL5 1215 aa9.69□□□□□ -0.86
SMG5-205ENST00000489907 YBX2Q9Y2T7 364 aaKnown RBP9.69□□□□□ -0.86
SMG5-205ENST00000489907 Q9Y3F1 56 aa9.69□□□□□ -0.86
SMG5-205ENST00000489907 TTC41PQ6P2S7 1318 aa9.68□□□□□ -0.86
SMG5-205ENST00000489907 B4GALT4O60513 344 aa9.68□□□□□ -0.86
SMG5-205ENST00000489907 NMT2O60551 498 aa9.68□□□□□ -0.86
SMG5-205ENST00000489907 SNAP25P60880 206 aa9.68□□□□□ -0.86
SMG5-205ENST00000489907 ITGA7Q13683 1181 aa9.68□□□□□ -0.86
SMG5-205ENST00000489907 TKFCQ3LXA3 575 aa9.68□□□□□ -0.86
SMG5-205ENST00000489907 IQSEC1Q6DN90 963 aa9.68□□□□□ -0.86
SMG5-205ENST00000489907 PSRC1Q6PGN9 363 aaPredicted RBP9.68□□□□□ -0.86
SMG5-205ENST00000489907 BTNL9Q6UXG8 535 aa9.68□□□□□ -0.86
SMG5-205ENST00000489907 KCTD1Q719H9 257 aa9.68□□□□□ -0.86
SMG5-205ENST00000489907 FAM160B2Q86V87 743 aa9.68□□□□□ -0.86
SMG5-205ENST00000489907 CHURC1Q8WUH1 139 aa9.68□□□□□ -0.86
SMG5-205ENST00000489907 NOC4LQ9BVI4 516 aaKnown RBP9.68□□□□□ -0.86
SMG5-205ENST00000489907 TRPV6Q9H1D0 765 aa9.68□□□□□ -0.86
SMG5-205ENST00000489907 SPC25Q9HBM1 224 aa9.68□□□□□ -0.86
SMG5-205ENST00000489907 ZNF287Q9HBT7 754 aa9.68□□□□□ -0.86
SMG5-205ENST00000489907 ANAPC4Q9UJX5 808 aa9.68□□□□□ -0.86
SMG5-205ENST00000489907 PCDHB15Q9Y5E8 787 aa9.68□□□□□ -0.86
SMG5-205ENST00000489907 MYO9BQ13459 2157 aa9.68□□□□□ -0.86
SMG5-205ENST00000489907 SCN10AQ9Y5Y9 1956 aa9.68□□□□□ -0.86
SMG5-205ENST00000489907 RBM47A0AV96 593 aaKnown RBP9.67□□□□□ -0.86
SMG5-205ENST00000489907 ASB14A6NK59 587 aa9.67□□□□□ -0.86
SMG5-205ENST00000489907 DYNC1LI2O43237 492 aaPredicted RBP9.67□□□□□ -0.86
SMG5-205ENST00000489907 CABYRO75952 493 aa9.67□□□□□ -0.86
SMG5-205ENST00000489907 FGBP02675 491 aa9.67□□□□□ -0.86
SMG5-205ENST00000489907 APPP05067 770 aa9.67□□□□□ -0.86
SMG5-205ENST00000489907 TSPY3P0CV98 308 aa9.67□□□□□ -0.86
SMG5-205ENST00000489907 TSPY8P0CW00 308 aa9.67□□□□□ -0.86
SMG5-205ENST00000489907 ALAS1P13196 640 aa9.67□□□□□ -0.86
SMG5-205ENST00000489907 PSMC6P62333 389 aa9.67□□□□□ -0.86
SMG5-205ENST00000489907 CTDSPL2Q05D32 466 aa9.67□□□□□ -0.86
SMG5-205ENST00000489907 PDE4BQ07343 736 aa9.67□□□□□ -0.86
SMG5-205ENST00000489907 AAMPQ13685 434 aa9.67□□□□□ -0.86
SMG5-205ENST00000489907 FSCN1Q16658 493 aaKnown RBP9.67□□□□□ -0.86
SMG5-205ENST00000489907 VPS53Q5VIR6 699 aa9.67□□□□□ -0.86
SMG5-205ENST00000489907 TTBK2Q6IQ55 1244 aa9.67□□□□□ -0.86
SMG5-205ENST00000489907 CCDC129Q6ZRS4 1044 aa9.67□□□□□ -0.86
SMG5-205ENST00000489907 TLK2Q86UE8 772 aa9.67□□□□□ -0.86
SMG5-205ENST00000489907 ATXN2LQ8WWM7 1075 aaKnown RBP9.67□□□□□ -0.86
SMG5-205ENST00000489907 VTI1AQ96AJ9 217 aa9.67□□□□□ -0.86
SMG5-205ENST00000489907 CHMP4CQ96CF2 233 aa9.67□□□□□ -0.86
SMG5-205ENST00000489907 RANBP17Q9H2T7 1088 aaKnown RBP9.67□□□□□ -0.86
SMG5-205ENST00000489907 TRANK1O15050 2925 aa9.67□□□□□ -0.86
SMG5-205ENST00000489907 TCF20Q9UGU0 1960 aaKnown RBP9.66□□□□□ -0.86
SMG5-205ENST00000489907 TNFRSF10AO00220 468 aa9.66□□□□□ -0.86
SMG5-205ENST00000489907 TLR3O15455 904 aaKnown RBP9.66□□□□□ -0.86
SMG5-205ENST00000489907 SLC1A4P43007 532 aa9.66□□□□□ -0.86
SMG5-205ENST00000489907 CCL23P55773 120 aa9.66□□□□□ -0.86
SMG5-205ENST00000489907 EEPD1Q7L9B9 569 aa9.66□□□□□ -0.86
SMG5-205ENST00000489907 OTOP2Q7RTS6 562 aa9.66□□□□□ -0.86
SMG5-205ENST00000489907 FBXO16Q8IX29 292 aaPredicted RBP9.66□□□□□ -0.86
SMG5-205ENST00000489907 TET1Q8NFU7 2136 aa9.66□□□□□ -0.86
SMG5-205ENST00000489907 CLEC4DQ8WXI8 215 aa9.66□□□□□ -0.86
SMG5-205ENST00000489907 ASB2Q96Q27 587 aa9.66□□□□□ -0.86
SMG5-205ENST00000489907 SEZ6LQ9BYH1 1024 aa9.66□□□□□ -0.86
SMG5-205ENST00000489907 NKX2-4Q9H2Z4 354 aa9.66□□□□□ -0.86
SMG5-205ENST00000489907 HIPK3Q9H422 1215 aa9.66□□□□□ -0.86
SMG5-205ENST00000489907 CTDP1Q9Y5B0 961 aaPredicted RBP9.66□□□□□ -0.86
SMG5-205ENST00000489907 TRIP12Q14669 1992 aaPredicted RBP9.65□□□□□ -0.86
SMG5-205ENST00000489907 NFIBO00712 420 aa9.65□□□□□ -0.86
SMG5-205ENST00000489907 ORC4O43929 436 aa9.65□□□□□ -0.86
SMG5-205ENST00000489907 ICAM1P05362 532 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms