RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 CPXCR1Q8N123 301 aa12.58□□□□□ -0.4
TFF3-203ENST00000489676 FAM177A1Q8N128 213 aaPredicted RBP12.58□□□□□ -0.4
TFF3-203ENST00000489676 ANKRD13CQ8N6S4 541 aa12.58□□□□□ -0.4
TFF3-203ENST00000489676 SHCBP1Q8NEM2 672 aa12.58□□□□□ -0.4
TFF3-203ENST00000489676 CLEC4DQ8WXI8 215 aa12.58□□□□□ -0.4
TFF3-203ENST00000489676 COA7Q96BR5 231 aa12.58□□□□□ -0.4
TFF3-203ENST00000489676 ALG1Q9BT22 464 aa12.58□□□□□ -0.4
TFF3-203ENST00000489676 MOV10L1Q9BXT6 1211 aaKnown RBP12.58□□□□□ -0.4
TFF3-203ENST00000489676 SH3GLB2Q9NR46 395 aa12.58□□□□□ -0.4
TFF3-203ENST00000489676 GJB4Q9NTQ9 266 aa12.58□□□□□ -0.4
TFF3-203ENST00000489676 FOXD4L1Q9NU39 408 aa12.58□□□□□ -0.4
TFF3-203ENST00000489676 RNF186Q9NXI6 227 aa12.58□□□□□ -0.4
TFF3-203ENST00000489676 PCDH10Q9P2E7 1040 aa12.58□□□□□ -0.4
TFF3-203ENST00000489676 PNMA2Q9UL42 364 aa12.58□□□□□ -0.4
TFF3-203ENST00000489676 ABCB11O95342 1321 aa12.58□□□□□ -0.4
TFF3-203ENST00000489676 PLXNB2O15031 1838 aa12.58□□□□□ -0.4
TFF3-203ENST00000489676 DDIT3P35638 169 aa12.57□□□□□ -0.4
TFF3-203ENST00000489676 TKFCQ3LXA3 575 aa12.57□□□□□ -0.4
TFF3-203ENST00000489676 MUM1L1Q5H9M0 696 aa12.57□□□□□ -0.4
TFF3-203ENST00000489676 WASF1Q92558 559 aa12.57□□□□□ -0.4
TFF3-203ENST00000489676 PORCNQ9H237 461 aa12.57□□□□□ -0.4
TFF3-203ENST00000489676 RNF146Q9NTX7 359 aa12.57□□□□□ -0.4
TFF3-203ENST00000489676 SAGE1Q9NXZ1 904 aa12.57□□□□□ -0.4
TFF3-203ENST00000489676 VPS54Q9P1Q0 977 aa12.57□□□□□ -0.4
TFF3-203ENST00000489676 CPA4Q9UI42 421 aa12.57□□□□□ -0.4
TFF3-203ENST00000489676 PCDHA1Q9Y5I3 950 aa12.57□□□□□ -0.4
TFF3-203ENST00000489676 MGAMO43451 1857 aa12.57□□□□□ -0.4
TFF3-203ENST00000489676 NFIBO00712 420 aa12.56□□□□□ -0.4
TFF3-203ENST00000489676 ADAMTS3O15072 1205 aa12.56□□□□□ -0.4
TFF3-203ENST00000489676 SLC25A27O95847 323 aa12.56□□□□□ -0.4
TFF3-203ENST00000489676 COPB2P35606 906 aa12.56□□□□□ -0.4
TFF3-203ENST00000489676 TRAF1Q13077 416 aa12.56□□□□□ -0.4
TFF3-203ENST00000489676 FAM184AQ8NB25 1140 aa12.56□□□□□ -0.4
TFF3-203ENST00000489676 RGS22Q8NE09 1264 aa12.56□□□□□ -0.4
TFF3-203ENST00000489676 GPRC5AQ8NFJ5 357 aa12.56□□□□□ -0.4
TFF3-203ENST00000489676 PHF20Q9BVI0 1012 aa12.56□□□□□ -0.4
TFF3-203ENST00000489676 ZMYND12Q9H0C1 365 aa12.56□□□□□ -0.4
TFF3-203ENST00000489676 KIF3AQ9Y496 699 aa12.56□□□□□ -0.4
TFF3-203ENST00000489676 CTDP1Q9Y5B0 961 aaPredicted RBP12.56□□□□□ -0.4
TFF3-203ENST00000489676 LRRC37A2A6NM11 1700 aa12.55□□□□□ -0.4
TFF3-203ENST00000489676 TRPA1O75762 1119 aa12.55□□□□□ -0.4
TFF3-203ENST00000489676 HSP90AA1P07900 732 aaKnown RBP12.55□□□□□ -0.4
TFF3-203ENST00000489676 ALAS1P13196 640 aa12.55□□□□□ -0.4
TFF3-203ENST00000489676 ERCC3P19447 782 aa12.55□□□□□ -0.4
TFF3-203ENST00000489676 CTCFP49711 727 aaPredicted RBP12.55□□□□□ -0.4
TFF3-203ENST00000489676 NAPAP54920 295 aa12.55□□□□□ -0.4
TFF3-203ENST00000489676 MAP2K1Q02750 393 aaPredicted RBP12.55□□□□□ -0.4
TFF3-203ENST00000489676 PLS1Q14651 629 aa12.55□□□□□ -0.4
TFF3-203ENST00000489676 NOM1Q5C9Z4 860 aaKnown RBP12.55□□□□□ -0.4
TFF3-203ENST00000489676 KRT40Q6A162 431 aa12.55□□□□□ -0.4
TFF3-203ENST00000489676 TEX2Q8IWB9 1127 aa12.55□□□□□ -0.4
TFF3-203ENST00000489676 DAGLBQ8NCG7 672 aa12.55□□□□□ -0.4
TFF3-203ENST00000489676 CHST13Q8NET6 341 aa12.55□□□□□ -0.4
TFF3-203ENST00000489676 CCDC148Q8NFR7 591 aa12.55□□□□□ -0.4
TFF3-203ENST00000489676 FBXO18Q8NFZ0 1043 aa12.55□□□□□ -0.4
TFF3-203ENST00000489676 CCDC12Q8WUD4 166 aaPredicted RBP12.55□□□□□ -0.4
TFF3-203ENST00000489676 TRERF1Q96PN7 1200 aa12.55□□□□□ -0.4
TFF3-203ENST00000489676 HOMER2Q9NSB8 354 aa12.55□□□□□ -0.4
TFF3-203ENST00000489676 WBP1LQ9NX94 342 aa12.55□□□□□ -0.4
TFF3-203ENST00000489676 MRPL11Q9Y3B7 192 aaKnown RBP12.55□□□□□ -0.4
TFF3-203ENST00000489676 M0R2N6 131 aa12.54□□□□□ -0.4
TFF3-203ENST00000489676 PIK3CDO00329 1044 aa12.54□□□□□ -0.4
TFF3-203ENST00000489676 MEIS2O14770 477 aa12.54□□□□□ -0.4
TFF3-203ENST00000489676 TBC1D8O95759 1140 aa12.54□□□□□ -0.4
TFF3-203ENST00000489676 MMP1P03956 469 aa12.54□□□□□ -0.4
TFF3-203ENST00000489676 SYT1P21579 422 aa12.54□□□□□ -0.4
TFF3-203ENST00000489676 CTGFP29279 349 aa12.54□□□□□ -0.4
TFF3-203ENST00000489676 CLK2P49760 499 aaKnown RBP12.54□□□□□ -0.4
TFF3-203ENST00000489676 HSD17B4P51659 736 aa12.54□□□□□ -0.4
TFF3-203ENST00000489676 CCNA1P78396 465 aa12.54□□□□□ -0.4
TFF3-203ENST00000489676 CAP1Q01518 475 aa12.54□□□□□ -0.4
TFF3-203ENST00000489676 SPRYD3Q8NCJ5 442 aa12.54□□□□□ -0.4
TFF3-203ENST00000489676 C8orf76Q96K31 380 aa12.54□□□□□ -0.4
TFF3-203ENST00000489676 IPO9Q96P70 1041 aaKnown RBP12.54□□□□□ -0.4
TFF3-203ENST00000489676 MAF1Q9H063 256 aa12.54□□□□□ -0.4
TFF3-203ENST00000489676 MROH8Q9H579 483 aa12.54□□□□□ -0.4
TFF3-203ENST00000489676 ACAD9Q9H845 621 aa12.54□□□□□ -0.4
TFF3-203ENST00000489676 EFCC1Q9HA90 598 aa12.54□□□□□ -0.4
TFF3-203ENST00000489676 CWC22Q9HCG8 908 aaKnown RBP12.54□□□□□ -0.4
TFF3-203ENST00000489676 RIC8AQ9NPQ8 531 aa12.54□□□□□ -0.4
TFF3-203ENST00000489676 A1CFQ9NQ94 594 aaKnown RBP12.54□□□□□ -0.4
TFF3-203ENST00000489676 FBXO40Q9UH90 709 aa12.54□□□□□ -0.4
TFF3-203ENST00000489676 KCNJ14Q9UNX9 436 aa12.54□□□□□ -0.4
TFF3-203ENST00000489676 PDCP20941 246 aa12.53□□□□□ -0.4
TFF3-203ENST00000489676 ADCY7P51828 1080 aa12.53□□□□□ -0.4
TFF3-203ENST00000489676 FOSBP53539 338 aa12.53□□□□□ -0.4
TFF3-203ENST00000489676 LACTBP83111 547 aaPredicted RBP12.53□□□□□ -0.4
TFF3-203ENST00000489676 GALNT17Q6IS24 598 aa12.53□□□□□ -0.4
TFF3-203ENST00000489676 SLC30A10Q6XR72 485 aa12.53□□□□□ -0.4
TFF3-203ENST00000489676 NCAPG2Q86XI2 1143 aa12.53□□□□□ -0.4
TFF3-203ENST00000489676 TBC1D5Q92609 795 aa12.53□□□□□ -0.4
TFF3-203ENST00000489676 TNFRSF25Q93038 417 aa12.53□□□□□ -0.4
TFF3-203ENST00000489676 COL20A1Q9P218 1284 aa12.53□□□□□ -0.4
TFF3-203ENST00000489676 PCDHA4Q9UN74 947 aa12.53□□□□□ -0.4
TFF3-203ENST00000489676 DOCK3Q8IZD9 2030 aa12.53□□□□□ -0.4
TFF3-203ENST00000489676 CENPFP49454 3210 aa12.52□□□□□ -0.4
TFF3-203ENST00000489676 DNAJC25-GNG10A0A024R161 153 aa12.52□□□□□ -0.41
TFF3-203ENST00000489676 SMCO2A6NFE2 343 aa12.52□□□□□ -0.41
TFF3-203ENST00000489676 GPR25O00155 361 aa12.52□□□□□ -0.41
TFF3-203ENST00000489676 XBP1P17861 261 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms