RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 KARSQ15046 597 aaKnown RBP16.84■□□□□ 0.29
COL9A1-208ENST00000489611 IGSF22Q8N9C0 903 aa16.84■□□□□ 0.29
COL9A1-208ENST00000489611 GREB1LQ9C091 1923 aaPredicted RBP16.83■□□□□ 0.29
COL9A1-208ENST00000489611 PSMA7O14818 248 aa16.83■□□□□ 0.28
COL9A1-208ENST00000489611 CCNT1O60563 726 aaKnown RBP16.83■□□□□ 0.28
COL9A1-208ENST00000489611 NPM3O75607 178 aaKnown RBP16.83■□□□□ 0.28
COL9A1-208ENST00000489611 EEF1GP26641 437 aaKnown RBP16.83■□□□□ 0.28
COL9A1-208ENST00000489611 CCDC93Q567U6 631 aa16.83■□□□□ 0.28
COL9A1-208ENST00000489611 NAALADL2Q58DX5 795 aa16.83■□□□□ 0.28
COL9A1-208ENST00000489611 REXO1L1PQ8IX06 675 aa16.83■□□□□ 0.28
COL9A1-208ENST00000489611 ADSSL1Q8N142 457 aa16.83■□□□□ 0.28
COL9A1-208ENST00000489611 NELFBQ8WX92 580 aa16.83■□□□□ 0.28
COL9A1-208ENST00000489611 BLZF1Q9H2G9 400 aa16.83■□□□□ 0.28
COL9A1-208ENST00000489611 USP40Q9NVE5 1235 aa16.83■□□□□ 0.28
COL9A1-208ENST00000489611 PIM2Q9P1W9 311 aa16.83■□□□□ 0.28
COL9A1-208ENST00000489611 PNMA6FA0A0J9YX94 578 aa16.82■□□□□ 0.28
COL9A1-208ENST00000489611 ADAMTS3O15072 1205 aa16.82■□□□□ 0.28
COL9A1-208ENST00000489611 ADCY7P51828 1080 aa16.82■□□□□ 0.28
COL9A1-208ENST00000489611 LETM2Q2VYF4 491 aa16.82■□□□□ 0.28
COL9A1-208ENST00000489611 COBLL1Q53SF7 1204 aa16.82■□□□□ 0.28
COL9A1-208ENST00000489611 HSP90AA4PQ58FG1 418 aa16.82■□□□□ 0.28
COL9A1-208ENST00000489611 SYT10Q6XYQ8 523 aa16.82■□□□□ 0.28
COL9A1-208ENST00000489611 CABP7Q86V35 215 aa16.82■□□□□ 0.28
COL9A1-208ENST00000489611 CERS5Q8N5B7 392 aa16.82■□□□□ 0.28
COL9A1-208ENST00000489611 GIMAP8Q8ND71 665 aaPredicted RBP16.82■□□□□ 0.28
COL9A1-208ENST00000489611 CALML4Q96GE6 196 aa16.82■□□□□ 0.28
COL9A1-208ENST00000489611 DHTKD1Q96HY7 919 aaPredicted RBP16.82■□□□□ 0.28
COL9A1-208ENST00000489611 PIGSQ96S52 555 aa16.82■□□□□ 0.28
COL9A1-208ENST00000489611 FEZ1Q99689 392 aa16.82■□□□□ 0.28
COL9A1-208ENST00000489611 TMEM60Q9H2L4 133 aa16.82■□□□□ 0.28
COL9A1-208ENST00000489611 MTMR7Q9Y216 660 aa16.82■□□□□ 0.28
COL9A1-208ENST00000489611 USP17L5A8MUK1 530 aa16.82■□□□□ 0.28
COL9A1-208ENST00000489611 F8W031 263 aaPredicted RBP16.82■□□□□ 0.28
COL9A1-208ENST00000489611 ECE2O60344 883 aa16.82■□□□□ 0.28
COL9A1-208ENST00000489611 FECHP22830 423 aa16.82■□□□□ 0.28
COL9A1-208ENST00000489611 CASP1P29466 404 aa16.82■□□□□ 0.28
COL9A1-208ENST00000489611 STX17P56962 302 aa16.82■□□□□ 0.28
COL9A1-208ENST00000489611 PDIA5Q14554 519 aa16.82■□□□□ 0.28
COL9A1-208ENST00000489611 TMEM266Q2M3C6 531 aa16.82■□□□□ 0.28
COL9A1-208ENST00000489611 TCP11X2Q5H9J9 407 aa16.82■□□□□ 0.28
COL9A1-208ENST00000489611 LRRC27Q9C0I9 530 aa16.82■□□□□ 0.28
COL9A1-208ENST00000489611 THAP9Q9H5L6 903 aa16.82■□□□□ 0.28
COL9A1-208ENST00000489611 STK17AQ9UEE5 414 aa16.82■□□□□ 0.28
COL9A1-208ENST00000489611 KIF13BQ9NQT8 1826 aa16.82■□□□□ 0.28
COL9A1-208ENST00000489611 BICDL2A1A5D9 508 aa16.81■□□□□ 0.28
COL9A1-208ENST00000489611 N4BP3O15049 544 aa16.81■□□□□ 0.28
COL9A1-208ENST00000489611 CCDC175P0C221 793 aa16.81■□□□□ 0.28
COL9A1-208ENST00000489611 FXR2P51116 673 aaKnown RBP eCLIP16.81■□□□□ 0.28
COL9A1-208ENST00000489611 ZNF543Q08ER8 600 aa16.81■□□□□ 0.28
COL9A1-208ENST00000489611 PICALMQ13492 652 aa16.81■□□□□ 0.28
COL9A1-208ENST00000489611 TBCKQ8TEA7 893 aa16.81■□□□□ 0.28
COL9A1-208ENST00000489611 STAMQ92783 540 aa16.81■□□□□ 0.28
COL9A1-208ENST00000489611 ZDHHC15Q96MV8 337 aa16.81■□□□□ 0.28
COL9A1-208ENST00000489611 C7orf25Q9BPX7 421 aa16.81■□□□□ 0.28
COL9A1-208ENST00000489611 KCNJ18B7U540 433 aa16.8■□□□□ 0.28
COL9A1-208ENST00000489611 PPIP5K2O43314 1243 aa16.8■□□□□ 0.28
COL9A1-208ENST00000489611 MFAP3LO75121 409 aa16.8■□□□□ 0.28
COL9A1-208ENST00000489611 PRCPP42785 496 aa16.8■□□□□ 0.28
COL9A1-208ENST00000489611 ADKP55263 362 aaKnown RBP16.8■□□□□ 0.28
COL9A1-208ENST00000489611 KCNJ12Q14500 433 aa16.8■□□□□ 0.28
COL9A1-208ENST00000489611 KRT31Q15323 416 aa16.8■□□□□ 0.28
COL9A1-208ENST00000489611 MCTP2Q6DN12 878 aa16.8■□□□□ 0.28
COL9A1-208ENST00000489611 TRIM65Q6PJ69 517 aa16.8■□□□□ 0.28
COL9A1-208ENST00000489611 SMYD4Q8IYR2 804 aaPredicted RBP16.8■□□□□ 0.28
COL9A1-208ENST00000489611 RTKN2Q8IZC4 609 aa16.8■□□□□ 0.28
COL9A1-208ENST00000489611 SUPT20HQ8NEM7 779 aa16.8■□□□□ 0.28
COL9A1-208ENST00000489611 TSC1Q92574 1164 aa16.8■□□□□ 0.28
COL9A1-208ENST00000489611 ZNF215Q9UL58 517 aaPredicted RBP16.8■□□□□ 0.28
COL9A1-208ENST00000489611 SLC26A4O43511 780 aa16.8■□□□□ 0.28
COL9A1-208ENST00000489611 GCFC2P16383 781 aaKnown RBP16.8■□□□□ 0.28
COL9A1-208ENST00000489611 MRPL12P52815 198 aaKnown RBP16.8■□□□□ 0.28
COL9A1-208ENST00000489611 STRIP1Q5VSL9 837 aa16.8■□□□□ 0.28
COL9A1-208ENST00000489611 PPP4R3AQ6IN85 833 aa16.8■□□□□ 0.28
COL9A1-208ENST00000489611 FAM114A1Q8IWE2 563 aa16.8■□□□□ 0.28
COL9A1-208ENST00000489611 RIC8AQ9NPQ8 531 aa16.8■□□□□ 0.28
COL9A1-208ENST00000489611 A0A1W2PQC6 194 aa16.79■□□□□ 0.28
COL9A1-208ENST00000489611 TEX33O43247 280 aa16.79■□□□□ 0.28
COL9A1-208ENST00000489611 AKR1B1P15121 316 aa16.79■□□□□ 0.28
COL9A1-208ENST00000489611 COPB1P53618 953 aaKnown RBP16.79■□□□□ 0.28
COL9A1-208ENST00000489611 KMT5BQ4FZB7 885 aa16.79■□□□□ 0.28
COL9A1-208ENST00000489611 DALRD3Q5D0E6 543 aaKnown RBP16.79■□□□□ 0.28
COL9A1-208ENST00000489611 CDC42EP5Q6NZY7 148 aa16.79■□□□□ 0.28
COL9A1-208ENST00000489611 TMTC1Q8IUR5 882 aa16.79■□□□□ 0.28
COL9A1-208ENST00000489611 MTMR9Q96QG7 549 aa16.79■□□□□ 0.28
COL9A1-208ENST00000489611 VAT1LQ9HCJ6 419 aa16.79■□□□□ 0.28
COL9A1-208ENST00000489611 ZNF277Q9NRM2 450 aaPredicted RBP16.79■□□□□ 0.28
COL9A1-208ENST00000489611 DNAI1Q9UI46 699 aa16.79■□□□□ 0.28
COL9A1-208ENST00000489611 MYH4Q9Y623 1939 aa16.79■□□□□ 0.28
COL9A1-208ENST00000489611 KLRC4O43908 158 aa16.78■□□□□ 0.28
COL9A1-208ENST00000489611 CDC25AP30304 524 aa16.78■□□□□ 0.28
COL9A1-208ENST00000489611 SHMT1P34896 483 aa16.78■□□□□ 0.28
COL9A1-208ENST00000489611 RBL2Q08999 1139 aa16.78■□□□□ 0.28
COL9A1-208ENST00000489611 CNNM4Q6P4Q7 775 aa16.78■□□□□ 0.28
COL9A1-208ENST00000489611 IQCDQ96DY2 449 aa16.78■□□□□ 0.28
COL9A1-208ENST00000489611 TRIM9Q9C026 710 aa16.78■□□□□ 0.28
COL9A1-208ENST00000489611 DDX4Q9NQI0 724 aaKnown RBP16.78■□□□□ 0.28
COL9A1-208ENST00000489611 MAGEC2Q9UBF1 373 aaPredicted RBP16.78■□□□□ 0.28
COL9A1-208ENST00000489611 CD2APQ9Y5K6 639 aa16.78■□□□□ 0.28
COL9A1-208ENST00000489611 PLCG1P19174 1290 aa16.78■□□□□ 0.28
COL9A1-208ENST00000489611 CRKP46108 304 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms