RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 LRRC2Q9BYS8 371 aa20.19■□□□□ 0.82
MDC1-206ENST00000489540 MAF1Q9H063 256 aa20.19■□□□□ 0.82
MDC1-206ENST00000489540 CNPY2Q9Y2B0 182 aa20.19■□□□□ 0.82
MDC1-206ENST00000489540 SNX14Q9Y5W7 946 aa20.19■□□□□ 0.82
MDC1-206ENST00000489540 SLC12A7Q9Y666 1083 aa20.19■□□□□ 0.82
MDC1-206ENST00000489540 SYNGAP1Q96PV0 1343 aa20.18■□□□□ 0.82
MDC1-206ENST00000489540 PSMA5P28066 241 aa20.18■□□□□ 0.82
MDC1-206ENST00000489540 GNAQP50148 359 aa20.18■□□□□ 0.82
MDC1-206ENST00000489540 QRICH1Q2TAL8 776 aa20.18■□□□□ 0.82
MDC1-206ENST00000489540 LHX8Q68G74 356 aa20.18■□□□□ 0.82
MDC1-206ENST00000489540 SYNE3Q6ZMZ3 975 aa20.18■□□□□ 0.82
MDC1-206ENST00000489540 FBXO11Q86XK2 927 aa20.18■□□□□ 0.82
MDC1-206ENST00000489540 ANKLE1Q8NAG6 615 aa20.18■□□□□ 0.82
MDC1-206ENST00000489540 RGS22Q8NE09 1264 aa20.18■□□□□ 0.82
MDC1-206ENST00000489540 TRPV1Q8NER1 839 aa20.18■□□□□ 0.82
MDC1-206ENST00000489540 CLEC4DQ8WXI8 215 aa20.18■□□□□ 0.82
MDC1-206ENST00000489540 MTMR8Q96EF0 704 aa20.18■□□□□ 0.82
MDC1-206ENST00000489540 LZTS2Q9BRK4 669 aa20.18■□□□□ 0.82
MDC1-206ENST00000489540 RIOX1Q9H6W3 641 aa20.18■□□□□ 0.82
MDC1-206ENST00000489540 OGDHLQ9ULD0 1010 aa20.18■□□□□ 0.82
MDC1-206ENST00000489540 CENPFP49454 3210 aa20.17■□□□□ 0.82
MDC1-206ENST00000489540 SEPT4O43236 478 aa20.17■□□□□ 0.82
MDC1-206ENST00000489540 SMARCA1P28370 1054 aa20.17■□□□□ 0.82
MDC1-206ENST00000489540 CNTN2Q02246 1040 aa20.17■□□□□ 0.82
MDC1-206ENST00000489540 TRAF1Q13077 416 aa20.17■□□□□ 0.82
MDC1-206ENST00000489540 PRAMEF19Q5SWL8 479 aa20.17■□□□□ 0.82
MDC1-206ENST00000489540 JAKMIP1Q96N16 626 aaKnown RBP20.17■□□□□ 0.82
MDC1-206ENST00000489540 AMNQ9BXJ7 453 aa20.17■□□□□ 0.82
MDC1-206ENST00000489540 DDX20Q9UHI6 824 aaKnown RBP20.17■□□□□ 0.82
MDC1-206ENST00000489540 ABCB11O95342 1321 aa20.16■□□□□ 0.82
MDC1-206ENST00000489540 ASB14A6NK59 587 aa20.16■□□□□ 0.82
MDC1-206ENST00000489540 NFIBO00712 420 aa20.16■□□□□ 0.82
MDC1-206ENST00000489540 ZBTB5O15062 677 aa20.16■□□□□ 0.82
MDC1-206ENST00000489540 TAL1P17542 331 aaPredicted RBP20.16■□□□□ 0.82
MDC1-206ENST00000489540 BAATQ14032 418 aaPredicted RBP20.16■□□□□ 0.82
MDC1-206ENST00000489540 USH1GQ495M9 461 aa20.16■□□□□ 0.82
MDC1-206ENST00000489540 BLOC1S2Q6QNY1 142 aa20.16■□□□□ 0.82
MDC1-206ENST00000489540 MRPL11Q9Y3B7 192 aaKnown RBP20.16■□□□□ 0.82
MDC1-206ENST00000489540 PTPDC1A2A3K4 754 aa20.15■□□□□ 0.82
MDC1-206ENST00000489540 FARP2O94887 1054 aaPredicted RBP20.15■□□□□ 0.82
MDC1-206ENST00000489540 SNAI1O95863 264 aaPredicted RBP20.15■□□□□ 0.82
MDC1-206ENST00000489540 RNF207Q6ZRF8 634 aa20.15■□□□□ 0.82
MDC1-206ENST00000489540 MCF2L2Q86YR7 1114 aa20.15■□□□□ 0.82
MDC1-206ENST00000489540 FGD4Q96M96 766 aa20.15■□□□□ 0.82
MDC1-206ENST00000489540 MYL10Q9BUA6 226 aa20.15■□□□□ 0.82
MDC1-206ENST00000489540 ADD3Q9UEY8 706 aaKnown RBP20.15■□□□□ 0.82
MDC1-206ENST00000489540 SOWAHBA6NEL2 793 aa20.14■□□□□ 0.81
MDC1-206ENST00000489540 FGD1P98174 961 aa20.14■□□□□ 0.81
MDC1-206ENST00000489540 UBE2Q1Q7Z7E8 422 aa20.14■□□□□ 0.81
MDC1-206ENST00000489540 FANCBQ8NB91 859 aa20.14■□□□□ 0.81
MDC1-206ENST00000489540 TCEANC2Q96MN5 208 aa20.14■□□□□ 0.81
MDC1-206ENST00000489540 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.14■□□□□ 0.81
MDC1-206ENST00000489540 RBBP6Q7Z6E9 1792 aaKnown RBP20.14■□□□□ 0.81
MDC1-206ENST00000489540 LOC102724159A0A0B4J2E5 919 aa20.13■□□□□ 0.81
MDC1-206ENST00000489540 PNMA6FA0A0J9YX94 578 aa20.13■□□□□ 0.81
MDC1-206ENST00000489540 CYTH3O43739 400 aa20.13■□□□□ 0.81
MDC1-206ENST00000489540 ZNF865P0CJ78 1059 aaPredicted RBP20.13■□□□□ 0.81
MDC1-206ENST00000489540 PWP2Q15269 919 aaKnown RBP20.13■□□□□ 0.81
MDC1-206ENST00000489540 SLC35G1Q2M3R5 365 aa20.13■□□□□ 0.81
MDC1-206ENST00000489540 ARMCX2Q7L311 632 aa20.13■□□□□ 0.81
MDC1-206ENST00000489540 CCDC144CPQ8IYA2 1237 aa20.13■□□□□ 0.81
MDC1-206ENST00000489540 SPZ1Q9BXG8 430 aa20.13■□□□□ 0.81
MDC1-206ENST00000489540 ABHD16BQ9H3Z7 469 aa20.13■□□□□ 0.81
MDC1-206ENST00000489540 PCDHA1Q9Y5I3 950 aa20.13■□□□□ 0.81
MDC1-206ENST00000489540 RPS6KB1P23443 525 aa20.12■□□□□ 0.81
MDC1-206ENST00000489540 CALML3P27482 149 aa20.12■□□□□ 0.81
MDC1-206ENST00000489540 RPS6P62753 249 aaKnown RBP20.12■□□□□ 0.81
MDC1-206ENST00000489540 ACVR2BQ13705 512 aa20.12■□□□□ 0.81
MDC1-206ENST00000489540 APOA5Q6Q788 366 aa20.12■□□□□ 0.81
MDC1-206ENST00000489540 HOMER1Q86YM7 354 aa20.12■□□□□ 0.81
MDC1-206ENST00000489540 FBXL16Q8N461 479 aa20.12■□□□□ 0.81
MDC1-206ENST00000489540 PIGSQ96S52 555 aa20.12■□□□□ 0.81
MDC1-206ENST00000489540 FAM184BQ9ULE4 1060 aa20.12■□□□□ 0.81
MDC1-206ENST00000489540 AKR1A1P14550 325 aa20.11■□□□□ 0.81
MDC1-206ENST00000489540 NECAB2Q7Z6G3 386 aa20.11■□□□□ 0.81
MDC1-206ENST00000489540 ARRDC4Q8NCT1 418 aa20.11■□□□□ 0.81
MDC1-206ENST00000489540 DNERQ8NFT8 737 aa20.11■□□□□ 0.81
MDC1-206ENST00000489540 RRP36Q96EU6 259 aaKnown RBP20.11■□□□□ 0.81
MDC1-206ENST00000489540 TM6SF1Q9BZW5 370 aa20.11■□□□□ 0.81
MDC1-206ENST00000489540 BRPF3Q9ULD4 1205 aa20.11■□□□□ 0.81
MDC1-206ENST00000489540 ZBTB43O43298 467 aa20.1■□□□□ 0.81
MDC1-206ENST00000489540 RARBP10826 455 aa20.1■□□□□ 0.81
MDC1-206ENST00000489540 CPA1P15085 419 aa20.1■□□□□ 0.81
MDC1-206ENST00000489540 RXRAP19793 462 aa20.1■□□□□ 0.81
MDC1-206ENST00000489540 CASTP20810 708 aaKnown RBP20.1■□□□□ 0.81
MDC1-206ENST00000489540 RCAN1P53805 252 aa20.1■□□□□ 0.81
MDC1-206ENST00000489540 SLC30A10Q6XR72 485 aa20.1■□□□□ 0.81
MDC1-206ENST00000489540 Q6ZUG5 572 aa20.1■□□□□ 0.81
MDC1-206ENST00000489540 MICU3Q86XE3 530 aa20.1■□□□□ 0.81
MDC1-206ENST00000489540 SAMD3Q8N6K7 520 aa20.1■□□□□ 0.81
MDC1-206ENST00000489540 PAWRQ96IZ0 340 aaKnown RBP20.1■□□□□ 0.81
MDC1-206ENST00000489540 MPHOSPH6Q99547 160 aaKnown RBP20.1■□□□□ 0.81
MDC1-206ENST00000489540 HTATIP2Q9BUP3 242 aa20.1■□□□□ 0.81
MDC1-206ENST00000489540 ZSWIM6Q9HCJ5 1215 aa20.1■□□□□ 0.81
MDC1-206ENST00000489540 RBM28Q9NW13 759 aaKnown RBP20.1■□□□□ 0.81
MDC1-206ENST00000489540 MAP3K20Q9NYL2 800 aaKnown RBP20.1■□□□□ 0.81
MDC1-206ENST00000489540 ZHX1Q9UKY1 873 aaPredicted RBP20.1■□□□□ 0.81
MDC1-206ENST00000489540 B4DLN1 442 aa20.1■□□□□ 0.81
MDC1-206ENST00000489540 PPP1R11O60927 126 aaPredicted RBP20.1■□□□□ 0.81
MDC1-206ENST00000489540 MRPL12P52815 198 aaKnown RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms