RNA–Protein interactions for RNA: ENST00000489443.2

LMX1A-204, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

TSL 1 (best)

Gene LMX1A, Length 1,255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-204ENST00000489443 CYP39A1Q9NYL5 469 aa18.33■□□□□ 0.52
LMX1A-204ENST00000489443 SNX14Q9Y5W7 946 aa18.33■□□□□ 0.52
LMX1A-204ENST00000489443 MCM3APO60318 1980 aa18.33■□□□□ 0.52
LMX1A-204ENST00000489443 PTPDC1A2A3K4 754 aa18.32■□□□□ 0.52
LMX1A-204ENST00000489443 DDAH1O94760 285 aa18.32■□□□□ 0.52
LMX1A-204ENST00000489443 FARP2O94887 1054 aaPredicted RBP18.32■□□□□ 0.52
LMX1A-204ENST00000489443 EXOSC10Q01780 885 aaKnown RBP18.32■□□□□ 0.52
LMX1A-204ENST00000489443 BAATQ14032 418 aaPredicted RBP18.32■□□□□ 0.52
LMX1A-204ENST00000489443 LHX8Q68G74 356 aa18.32■□□□□ 0.52
LMX1A-204ENST00000489443 FBXO11Q86XK2 927 aa18.32■□□□□ 0.52
LMX1A-204ENST00000489443 RAB11FIP4Q86YS3 637 aa18.32■□□□□ 0.52
LMX1A-204ENST00000489443 MSL3Q8N5Y2 521 aaKnown RBP18.32■□□□□ 0.52
LMX1A-204ENST00000489443 FAM133AQ8N9E0 248 aa18.32■□□□□ 0.52
LMX1A-204ENST00000489443 CTCFLQ8NI51 663 aaPredicted RBP18.32■□□□□ 0.52
LMX1A-204ENST00000489443 CLEC4DQ8WXI8 215 aa18.32■□□□□ 0.52
LMX1A-204ENST00000489443 JAKMIP1Q96N16 626 aaKnown RBP18.32■□□□□ 0.52
LMX1A-204ENST00000489443 DDX20Q9UHI6 824 aaKnown RBP18.32■□□□□ 0.52
LMX1A-204ENST00000489443 CNPY2Q9Y2B0 182 aa18.32■□□□□ 0.52
LMX1A-204ENST00000489443 SLC12A7Q9Y666 1083 aa18.32■□□□□ 0.52
LMX1A-204ENST00000489443 SOWAHBA6NEL2 793 aa18.31■□□□□ 0.52
LMX1A-204ENST00000489443 HMGB1P09429 215 aaKnown RBP18.31■□□□□ 0.52
LMX1A-204ENST00000489443 CPA1P15085 419 aa18.31■□□□□ 0.52
LMX1A-204ENST00000489443 CAPN2P17655 700 aa18.31■□□□□ 0.52
LMX1A-204ENST00000489443 RXRAP19793 462 aa18.31■□□□□ 0.52
LMX1A-204ENST00000489443 KIF5BP33176 963 aa18.31■□□□□ 0.52
LMX1A-204ENST00000489443 ANO1Q5XXA6 986 aa18.31■□□□□ 0.52
LMX1A-204ENST00000489443 MAMDC4Q6UXC1 1216 aa18.31■□□□□ 0.52
LMX1A-204ENST00000489443 ZNF467Q7Z7K2 595 aaPredicted RBP18.31■□□□□ 0.52
LMX1A-204ENST00000489443 HOMER1Q86YM7 354 aa18.31■□□□□ 0.52
LMX1A-204ENST00000489443 FGD4Q96M96 766 aa18.31■□□□□ 0.52
LMX1A-204ENST00000489443 USP26Q9BXU7 913 aa18.31■□□□□ 0.52
LMX1A-204ENST00000489443 OGDHLQ9ULD0 1010 aa18.31■□□□□ 0.52
LMX1A-204ENST00000489443 ABCB11O95342 1321 aa18.3■□□□□ 0.52
LMX1A-204ENST00000489443 SYNGAP1Q96PV0 1343 aa18.3■□□□□ 0.52
LMX1A-204ENST00000489443 SEPT4O43236 478 aa18.3■□□□□ 0.52
LMX1A-204ENST00000489443 SNAI1O95863 264 aaPredicted RBP18.3■□□□□ 0.52
LMX1A-204ENST00000489443 CALML3P27482 149 aa18.3■□□□□ 0.52
LMX1A-204ENST00000489443 FGD1P98174 961 aa18.3■□□□□ 0.52
LMX1A-204ENST00000489443 SLC35G1Q2M3R5 365 aa18.3■□□□□ 0.52
LMX1A-204ENST00000489443 SYNE3Q6ZMZ3 975 aa18.3■□□□□ 0.52
LMX1A-204ENST00000489443 RNF207Q6ZRF8 634 aa18.3■□□□□ 0.52
LMX1A-204ENST00000489443 CCDC144CPQ8IYA2 1237 aa18.3■□□□□ 0.52
LMX1A-204ENST00000489443 PIBF1Q8WXW3 757 aa18.3■□□□□ 0.52
LMX1A-204ENST00000489443 PAWRQ96IZ0 340 aaKnown RBP18.3■□□□□ 0.52
LMX1A-204ENST00000489443 PURBQ96QR8 312 aaKnown RBP18.3■□□□□ 0.52
LMX1A-204ENST00000489443 PIGSQ96S52 555 aa18.3■□□□□ 0.52
LMX1A-204ENST00000489443 MAP3K14Q99558 947 aa18.3■□□□□ 0.52
LMX1A-204ENST00000489443 RIOX1Q9H6W3 641 aa18.3■□□□□ 0.52
LMX1A-204ENST00000489443 NRBP1Q9UHY1 535 aa18.3■□□□□ 0.52
LMX1A-204ENST00000489443 DNAH12Q6ZR08 3092 aa18.3■□□□□ 0.52
LMX1A-204ENST00000489443 CEP290O15078 2479 aa18.29■□□□□ 0.52
LMX1A-204ENST00000489443 ZBTB5O15062 677 aa18.29■□□□□ 0.52
LMX1A-204ENST00000489443 EPB41L2O43491 1005 aaKnown RBP18.29■□□□□ 0.52
LMX1A-204ENST00000489443 MSCO60682 206 aa18.29■□□□□ 0.52
LMX1A-204ENST00000489443 CALM1P0DP23 149 aa18.29■□□□□ 0.52
LMX1A-204ENST00000489443 CALM2P0DP24 149 aa18.29■□□□□ 0.52
LMX1A-204ENST00000489443 CALM3P0DP25 149 aa18.29■□□□□ 0.52
LMX1A-204ENST00000489443 BLOC1S2Q6QNY1 142 aa18.29■□□□□ 0.52
LMX1A-204ENST00000489443 ARMCX2Q7L311 632 aa18.29■□□□□ 0.52
LMX1A-204ENST00000489443 UBE2Q1Q7Z7E8 422 aa18.29■□□□□ 0.52
LMX1A-204ENST00000489443 SGMS1Q86VZ5 419 aa18.29■□□□□ 0.52
LMX1A-204ENST00000489443 ANKLE1Q8NAG6 615 aa18.29■□□□□ 0.52
LMX1A-204ENST00000489443 DIS3LQ8TF46 1054 aaKnown RBP18.29■□□□□ 0.52
LMX1A-204ENST00000489443 MTMR8Q96EF0 704 aa18.29■□□□□ 0.52
LMX1A-204ENST00000489443 AMNQ9BXJ7 453 aa18.29■□□□□ 0.52
LMX1A-204ENST00000489443 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.29■□□□□ 0.52
LMX1A-204ENST00000489443 ZHX1Q9UKY1 873 aaPredicted RBP18.29■□□□□ 0.52
LMX1A-204ENST00000489443 ASB14A6NK59 587 aa18.28■□□□□ 0.52
LMX1A-204ENST00000489443 CYTH3O43739 400 aa18.28■□□□□ 0.52
LMX1A-204ENST00000489443 ZNF865P0CJ78 1059 aaPredicted RBP18.28■□□□□ 0.52
LMX1A-204ENST00000489443 RPS6P62753 249 aaKnown RBP18.28■□□□□ 0.52
LMX1A-204ENST00000489443 SLC30A10Q6XR72 485 aa18.28■□□□□ 0.52
LMX1A-204ENST00000489443 MICU3Q86XE3 530 aa18.28■□□□□ 0.52
LMX1A-204ENST00000489443 MRPL11Q9Y3B7 192 aaKnown RBP18.28■□□□□ 0.52
LMX1A-204ENST00000489443 DDX49Q9Y6V7 483 aaKnown RBP18.28■□□□□ 0.52
LMX1A-204ENST00000489443 FRMPD3Q5JV73 1810 aa18.28■□□□□ 0.52
LMX1A-204ENST00000489443 LCTP09848 1927 aa18.27■□□□□ 0.52
LMX1A-204ENST00000489443 ASTN1O14525 1302 aa18.27■□□□□ 0.52
LMX1A-204ENST00000489443 PPP1R11O60927 126 aaPredicted RBP18.27■□□□□ 0.52
LMX1A-204ENST00000489443 PLEKHA8P1O95397 391 aa18.27■□□□□ 0.52
LMX1A-204ENST00000489443 MYCNP04198 464 aaPredicted RBP18.27■□□□□ 0.52
LMX1A-204ENST00000489443 CASTP20810 708 aaKnown RBP18.27■□□□□ 0.52
LMX1A-204ENST00000489443 PSMA5P28066 241 aa18.27■□□□□ 0.52
LMX1A-204ENST00000489443 GNAQP50148 359 aa18.27■□□□□ 0.52
LMX1A-204ENST00000489443 ACVR2BQ13705 512 aa18.27■□□□□ 0.52
LMX1A-204ENST00000489443 APOA5Q6Q788 366 aa18.27■□□□□ 0.52
LMX1A-204ENST00000489443 NECAB2Q7Z6G3 386 aa18.27■□□□□ 0.52
LMX1A-204ENST00000489443 CMTR1Q8N1G2 835 aaKnown RBP18.27■□□□□ 0.52
LMX1A-204ENST00000489443 FANCBQ8NB91 859 aa18.27■□□□□ 0.52
LMX1A-204ENST00000489443 RGS22Q8NE09 1264 aa18.27■□□□□ 0.52
LMX1A-204ENST00000489443 TBC1D5Q92609 795 aa18.27■□□□□ 0.52
LMX1A-204ENST00000489443 LZTS2Q9BRK4 669 aa18.27■□□□□ 0.52
LMX1A-204ENST00000489443 ABHD16BQ9H3Z7 469 aa18.27■□□□□ 0.52
LMX1A-204ENST00000489443 ADD3Q9UEY8 706 aaKnown RBP18.27■□□□□ 0.52
LMX1A-204ENST00000489443 BRPF3Q9ULD4 1205 aa18.27■□□□□ 0.52
LMX1A-204ENST00000489443 NAP1L2Q9ULW6 460 aaPredicted RBP18.27■□□□□ 0.52
LMX1A-204ENST00000489443 PCDHA1Q9Y5I3 950 aa18.27■□□□□ 0.52
LMX1A-204ENST00000489443 PNMA6FA0A0J9YX94 578 aa18.26■□□□□ 0.51
LMX1A-204ENST00000489443 RPS6KB1P23443 525 aa18.26■□□□□ 0.51
LMX1A-204ENST00000489443 MNX1P50219 401 aaPredicted RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms