RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 NXNQ6DKJ4 435 aa19.29■□□□□ 0.68
NPHP4-209ENST00000489180 TRMT2AQ8IZ69 625 aaKnown RBP19.29■□□□□ 0.68
NPHP4-209ENST00000489180 GLG1Q92896 1179 aa19.29■□□□□ 0.68
NPHP4-209ENST00000489180 ANTXR1Q9H6X2 564 aa19.29■□□□□ 0.68
NPHP4-209ENST00000489180 PPP6R2O75170 966 aa19.29■□□□□ 0.68
NPHP4-209ENST00000489180 BTDP43251 543 aa19.29■□□□□ 0.68
NPHP4-209ENST00000489180 SLC12A2P55011 1212 aa19.29■□□□□ 0.68
NPHP4-209ENST00000489180 TBC1D22AQ8WUA7 517 aa19.29■□□□□ 0.68
NPHP4-209ENST00000489180 CARD10Q9BWT7 1032 aa19.29■□□□□ 0.68
NPHP4-209ENST00000489180 ATF2P15336 505 aa19.29■□□□□ 0.68
NPHP4-209ENST00000489180 PHBP35232 272 aa19.29■□□□□ 0.68
NPHP4-209ENST00000489180 CACNB1Q02641 598 aaPredicted RBP19.29■□□□□ 0.68
NPHP4-209ENST00000489180 ZMYM1Q5SVZ6 1142 aa19.29■□□□□ 0.68
NPHP4-209ENST00000489180 SLFN12Q8IYM2 578 aa19.29■□□□□ 0.68
NPHP4-209ENST00000489180 METTL13Q8N6R0 699 aa19.29■□□□□ 0.68
NPHP4-209ENST00000489180 CDCA7Q9BWT1 371 aaPredicted RBP19.29■□□□□ 0.68
NPHP4-209ENST00000489180 KIAA1024Q9UPX6 916 aa19.29■□□□□ 0.68
NPHP4-209ENST00000489180 FAN1Q9Y2M0 1017 aa19.29■□□□□ 0.68
NPHP4-209ENST00000489180 H0YIN7 160 aa19.29■□□□□ 0.68
NPHP4-209ENST00000489180 CXCR5P32302 372 aa19.29■□□□□ 0.68
NPHP4-209ENST00000489180 YARSP54577 528 aaKnown RBP19.29■□□□□ 0.68
NPHP4-209ENST00000489180 ARHGEF16Q5VV41 709 aa19.29■□□□□ 0.68
NPHP4-209ENST00000489180 C1orf112Q9NSG2 853 aa19.29■□□□□ 0.68
NPHP4-209ENST00000489180 MAN1B1Q9UKM7 699 aa19.29■□□□□ 0.68
NPHP4-209ENST00000489180 ERVV-2B6SEH9 535 aa19.28■□□□□ 0.68
NPHP4-209ENST00000489180 ZNF853P0CG23 659 aa19.28■□□□□ 0.68
NPHP4-209ENST00000489180 ALAS1P13196 640 aa19.28■□□□□ 0.68
NPHP4-209ENST00000489180 GABPB2Q8TAK5 448 aaPredicted RBP19.28■□□□□ 0.68
NPHP4-209ENST00000489180 GPHNQ9NQX3 736 aaPredicted RBP19.28■□□□□ 0.68
NPHP4-209ENST00000489180 SEPT10Q9P0V9 454 aa19.28■□□□□ 0.68
NPHP4-209ENST00000489180 FMNL1O95466 1100 aaPredicted RBP19.28■□□□□ 0.68
NPHP4-209ENST00000489180 EXOC3L4Q17RC7 722 aa19.28■□□□□ 0.68
NPHP4-209ENST00000489180 EFCC1Q9HA90 598 aa19.28■□□□□ 0.68
NPHP4-209ENST00000489180 ADAMTS12P58397 1594 aa19.28■□□□□ 0.68
NPHP4-209ENST00000489180 HIP1RO75146 1068 aa19.28■□□□□ 0.68
NPHP4-209ENST00000489180 GBP7Q8N8V2 638 aaPredicted RBP19.28■□□□□ 0.68
NPHP4-209ENST00000489180 PGBD1Q96JS3 809 aa19.28■□□□□ 0.68
NPHP4-209ENST00000489180 GBP5Q96PP8 586 aa19.28■□□□□ 0.68
NPHP4-209ENST00000489180 KIF3CO14782 793 aa19.28■□□□□ 0.68
NPHP4-209ENST00000489180 APOA5Q6Q788 366 aa19.28■□□□□ 0.68
NPHP4-209ENST00000489180 PRAMEF22A3QJZ6 481 aa19.27■□□□□ 0.68
NPHP4-209ENST00000489180 RFC1P35251 1148 aaPredicted RBP19.27■□□□□ 0.68
NPHP4-209ENST00000489180 MESDQ14696 234 aa19.27■□□□□ 0.68
NPHP4-209ENST00000489180 ARMCX5Q6P1M9 558 aa19.27■□□□□ 0.68
NPHP4-209ENST00000489180 PPP4R1Q8TF05 950 aa19.27■□□□□ 0.68
NPHP4-209ENST00000489180 TEKT1Q969V4 418 aa19.27■□□□□ 0.68
NPHP4-209ENST00000489180 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.27■□□□□ 0.68
NPHP4-209ENST00000489180 SAMSN1Q9NSI8 373 aaKnown RBP19.27■□□□□ 0.68
NPHP4-209ENST00000489180 ATP7AQ04656 1500 aa19.27■□□□□ 0.68
NPHP4-209ENST00000489180 ADGRL2O95490 1459 aa19.27■□□□□ 0.68
NPHP4-209ENST00000489180 IFT88Q13099 833 aa19.27■□□□□ 0.68
NPHP4-209ENST00000489180 PDE1CQ14123 709 aaPredicted RBP19.27■□□□□ 0.68
NPHP4-209ENST00000489180 NACA2Q9H009 215 aa19.27■□□□□ 0.68
NPHP4-209ENST00000489180 EPB41L5Q9HCM4 733 aa19.27■□□□□ 0.68
NPHP4-209ENST00000489180 POLR3EQ9NVU0 708 aa19.27■□□□□ 0.68
NPHP4-209ENST00000489180 TTC36A6NLP5 189 aa19.27■□□□□ 0.67
NPHP4-209ENST00000489180 DLGAP5Q15398 846 aa19.27■□□□□ 0.67
NPHP4-209ENST00000489180 TBC1D10BQ4KMP7 808 aaPredicted RBP19.27■□□□□ 0.67
NPHP4-209ENST00000489180 IVNS1ABPQ9Y6Y0 642 aa19.27■□□□□ 0.67
NPHP4-209ENST00000489180 PCCAP05165 728 aaPredicted RBP19.26■□□□□ 0.67
NPHP4-209ENST00000489180 POLR2MP0CAP2 368 aa19.26■□□□□ 0.67
NPHP4-209ENST00000489180 DOK7Q18PE1 504 aa19.26■□□□□ 0.67
NPHP4-209ENST00000489180 GSDMAQ96QA5 445 aa19.26■□□□□ 0.67
NPHP4-209ENST00000489180 POC1B-GALNT4F8VUJ3 575 aa19.26■□□□□ 0.67
NPHP4-209ENST00000489180 POLA2Q14181 598 aa19.26■□□□□ 0.67
NPHP4-209ENST00000489180 FBXO11Q86XK2 927 aa19.26■□□□□ 0.67
NPHP4-209ENST00000489180 MMS19Q96T76 1030 aa19.26■□□□□ 0.67
NPHP4-209ENST00000489180 ZNF148Q9UQR1 794 aa19.26■□□□□ 0.67
NPHP4-209ENST00000489180 COL4A3BPQ9Y5P4 624 aa19.26■□□□□ 0.67
NPHP4-209ENST00000489180 SAT1P21673 171 aa19.26■□□□□ 0.67
NPHP4-209ENST00000489180 CDC25AP30304 524 aa19.26■□□□□ 0.67
NPHP4-209ENST00000489180 KIF23Q02241 960 aaPredicted RBP19.26■□□□□ 0.67
NPHP4-209ENST00000489180 DMTNQ08495 405 aa19.26■□□□□ 0.67
NPHP4-209ENST00000489180 PLA2G4DQ86XP0 818 aa19.26■□□□□ 0.67
NPHP4-209ENST00000489180 GSDMBQ8TAX9 411 aa19.26■□□□□ 0.67
NPHP4-209ENST00000489180 IWS1Q96ST2 819 aa19.26■□□□□ 0.67
NPHP4-209ENST00000489180 FOXP1Q9H334 677 aaPredicted RBP19.26■□□□□ 0.67
NPHP4-209ENST00000489180 OSBPL3Q9H4L5 887 aa19.26■□□□□ 0.67
NPHP4-209ENST00000489180 ABCC2Q92887 1545 aa19.26■□□□□ 0.67
NPHP4-209ENST00000489180 PLEKHG3A1L390 1219 aa19.26■□□□□ 0.67
NPHP4-209ENST00000489180 OPHN1O60890 802 aa19.26■□□□□ 0.67
NPHP4-209ENST00000489180 MOCS3O95396 460 aa19.26■□□□□ 0.67
NPHP4-209ENST00000489180 GCKP35557 465 aa19.26■□□□□ 0.67
NPHP4-209ENST00000489180 NR5A1Q13285 461 aa19.26■□□□□ 0.67
NPHP4-209ENST00000489180 CHURC1Q8WUH1 139 aa19.26■□□□□ 0.67
NPHP4-209ENST00000489180 NSMCE1Q8WV22 266 aa19.26■□□□□ 0.67
NPHP4-209ENST00000489180 COPRSQ9NQ92 184 aa19.26■□□□□ 0.67
NPHP4-209ENST00000489180 TCP10L2B9ZVM9 353 aa19.25■□□□□ 0.67
NPHP4-209ENST00000489180 LLGL1Q15334 1064 aa19.25■□□□□ 0.67
NPHP4-209ENST00000489180 UBE3CQ15386 1083 aa19.25■□□□□ 0.67
NPHP4-209ENST00000489180 TRPC6Q9Y210 931 aa19.25■□□□□ 0.67
NPHP4-209ENST00000489180 BFSP1Q12934 665 aa19.25■□□□□ 0.67
NPHP4-209ENST00000489180 HADHQ16836 314 aaKnown RBP19.25■□□□□ 0.67
NPHP4-209ENST00000489180 LINC00301Q8NCQ3 95 aa19.25■□□□□ 0.67
NPHP4-209ENST00000489180 HEXIM1O94992 359 aaKnown RBP19.25■□□□□ 0.67
NPHP4-209ENST00000489180 P4HA1P13674 534 aa19.25■□□□□ 0.67
NPHP4-209ENST00000489180 YWHAEP62258 255 aaKnown RBP19.25■□□□□ 0.67
NPHP4-209ENST00000489180 UBXN2AP68543 259 aa19.25■□□□□ 0.67
NPHP4-209ENST00000489180 MYL7Q01449 175 aa19.25■□□□□ 0.67
NPHP4-209ENST00000489180 ANO3Q9BYT9 981 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms