RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 MRPL11Q9Y3B7 192 aaKnown RBP18.4■□□□□ 0.54
CLDN11-208ENST00000488989 PDHXO00330 501 aa18.39■□□□□ 0.53
CLDN11-208ENST00000488989 OPLAHO14841 1288 aa18.39■□□□□ 0.53
CLDN11-208ENST00000488989 GHRHRQ02643 423 aa18.39■□□□□ 0.53
CLDN11-208ENST00000488989 USH1GQ495M9 461 aa18.39■□□□□ 0.53
CLDN11-208ENST00000488989 MCTP1Q6DN14 999 aa18.39■□□□□ 0.53
CLDN11-208ENST00000488989 CLEC17AQ6ZS10 378 aa18.39■□□□□ 0.53
CLDN11-208ENST00000488989 FERMT3Q86UX7 667 aa18.39■□□□□ 0.53
CLDN11-208ENST00000488989 FAM43AQ8N2R8 423 aa18.39■□□□□ 0.53
CLDN11-208ENST00000488989 BICD2Q8TD16 824 aa18.39■□□□□ 0.53
CLDN11-208ENST00000488989 OXER1Q8TDS5 423 aa18.39■□□□□ 0.53
CLDN11-208ENST00000488989 TNPO1Q92973 898 aaKnown RBP18.39■□□□□ 0.53
CLDN11-208ENST00000488989 AGBL1Q96MI9 1066 aa18.39■□□□□ 0.53
CLDN11-208ENST00000488989 RAVER2Q9HCJ3 691 aaKnown RBP18.39■□□□□ 0.53
CLDN11-208ENST00000488989 CCPG1Q9ULG6 757 aa18.39■□□□□ 0.53
CLDN11-208ENST00000488989 CTDP1Q9Y5B0 961 aaPredicted RBP18.39■□□□□ 0.53
CLDN11-208ENST00000488989 ADAMTS3O15072 1205 aa18.38■□□□□ 0.53
CLDN11-208ENST00000488989 CNMDO75829 334 aa18.38■□□□□ 0.53
CLDN11-208ENST00000488989 CLK2P49760 499 aaKnown RBP18.38■□□□□ 0.53
CLDN11-208ENST00000488989 ADCY7P51828 1080 aa18.38■□□□□ 0.53
CLDN11-208ENST00000488989 MRPL12P52815 198 aaKnown RBP18.38■□□□□ 0.53
CLDN11-208ENST00000488989 NR5A1Q13285 461 aa18.38■□□□□ 0.53
CLDN11-208ENST00000488989 DEFB115Q30KQ5 88 aa18.38■□□□□ 0.53
CLDN11-208ENST00000488989 TKFCQ3LXA3 575 aa18.38■□□□□ 0.53
CLDN11-208ENST00000488989 FOXD4L5Q5VV16 416 aaPredicted RBP18.38■□□□□ 0.53
CLDN11-208ENST00000488989 SAMD3Q8N6K7 520 aa18.38■□□□□ 0.53
CLDN11-208ENST00000488989 FOXD4L4Q8WXT5 416 aaPredicted RBP18.38■□□□□ 0.53
CLDN11-208ENST00000488989 CUL5Q93034 780 aa18.38■□□□□ 0.53
CLDN11-208ENST00000488989 TEX13BQ9BXU2 312 aa18.38■□□□□ 0.53
CLDN11-208ENST00000488989 MAF1Q9H063 256 aa18.38■□□□□ 0.53
CLDN11-208ENST00000488989 RABGAP1Q9Y3P9 1069 aa18.38■□□□□ 0.53
CLDN11-208ENST00000488989 ATP6V1DQ9Y5K8 247 aa18.38■□□□□ 0.53
CLDN11-208ENST00000488989 MYH7BA7E2Y1 1941 aa18.38■□□□□ 0.53
CLDN11-208ENST00000488989 PIK3CDO00329 1044 aa18.37■□□□□ 0.53
CLDN11-208ENST00000488989 TAL1P17542 331 aaPredicted RBP18.37■□□□□ 0.53
CLDN11-208ENST00000488989 TM4SF4P48230 202 aa18.37■□□□□ 0.53
CLDN11-208ENST00000488989 NOSTRINQ8IVI9 506 aa18.37■□□□□ 0.53
CLDN11-208ENST00000488989 CPXCR1Q8N123 301 aa18.37■□□□□ 0.53
CLDN11-208ENST00000488989 CLEC4DQ8WXI8 215 aa18.37■□□□□ 0.53
CLDN11-208ENST00000488989 PSTPIP2Q9H939 334 aa18.37■□□□□ 0.53
CLDN11-208ENST00000488989 BTBD7Q9P203 1132 aa18.37■□□□□ 0.53
CLDN11-208ENST00000488989 PCDHA6Q9UN73 950 aa18.37■□□□□ 0.53
CLDN11-208ENST00000488989 PCDHA8Q9Y5H6 950 aa18.37■□□□□ 0.53
CLDN11-208ENST00000488989 IGF2BP3O00425 579 aaKnown RBP eCLIP18.36■□□□□ 0.53
CLDN11-208ENST00000488989 MEIS2O14770 477 aa18.36■□□□□ 0.53
CLDN11-208ENST00000488989 STAT3P40763 770 aa18.36■□□□□ 0.53
CLDN11-208ENST00000488989 SREBF2Q12772 1141 aa18.36■□□□□ 0.53
CLDN11-208ENST00000488989 NOGQ13253 232 aa18.36■□□□□ 0.53
CLDN11-208ENST00000488989 CYP4F22Q6NT55 531 aa18.36■□□□□ 0.53
CLDN11-208ENST00000488989 RIOX2Q8IUF8 465 aa18.36■□□□□ 0.53
CLDN11-208ENST00000488989 PARK7Q99497 189 aaKnown RBP18.36■□□□□ 0.53
CLDN11-208ENST00000488989 RBPJLQ9UBG7 517 aa18.36■□□□□ 0.53
CLDN11-208ENST00000488989 ZNFX1Q9P2E3 1918 aaKnown RBP18.35■□□□□ 0.53
CLDN11-208ENST00000488989 ADGRA2Q96PE1 1338 aa18.35■□□□□ 0.53
CLDN11-208ENST00000488989 ALAS1P13196 640 aa18.35■□□□□ 0.53
CLDN11-208ENST00000488989 GCLCP48506 637 aaPredicted RBP18.35■□□□□ 0.53
CLDN11-208ENST00000488989 GNL2Q13823 731 aaKnown RBP18.35■□□□□ 0.53
CLDN11-208ENST00000488989 MYSM1Q5VVJ2 828 aa18.35■□□□□ 0.53
CLDN11-208ENST00000488989 ATL3Q6DD88 541 aa18.35■□□□□ 0.53
CLDN11-208ENST00000488989 MCTP2Q6DN12 878 aa18.35■□□□□ 0.53
CLDN11-208ENST00000488989 SNRNP48Q6IEG0 339 aaKnown RBP18.35■□□□□ 0.53
CLDN11-208ENST00000488989 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.35■□□□□ 0.53
CLDN11-208ENST00000488989 IFNL1Q8IU54 200 aa18.35■□□□□ 0.53
CLDN11-208ENST00000488989 REXO1Q8N1G1 1221 aaKnown RBP18.35■□□□□ 0.53
CLDN11-208ENST00000488989 SPATC1LQ9H0A9 340 aa18.35■□□□□ 0.53
CLDN11-208ENST00000488989 MAP3K20Q9NYL2 800 aaKnown RBP18.35■□□□□ 0.53
CLDN11-208ENST00000488989 RIPK3Q9Y572 518 aa18.35■□□□□ 0.53
CLDN11-208ENST00000488989 CYP2C8P10632 490 aa18.34■□□□□ 0.53
CLDN11-208ENST00000488989 COPB2P35606 906 aa18.34■□□□□ 0.53
CLDN11-208ENST00000488989 AP3B2Q13367 1082 aa18.34■□□□□ 0.53
CLDN11-208ENST00000488989 EARS2Q5JPH6 523 aaKnown RBP18.34■□□□□ 0.53
CLDN11-208ENST00000488989 KRT25Q7Z3Z0 450 aa18.34■□□□□ 0.53
CLDN11-208ENST00000488989 MCF2L2Q86YR7 1114 aa18.34■□□□□ 0.53
CLDN11-208ENST00000488989 REM2Q8IYK8 340 aaPredicted RBP18.34■□□□□ 0.53
CLDN11-208ENST00000488989 CHST13Q8NET6 341 aa18.34■□□□□ 0.53
CLDN11-208ENST00000488989 CAPNS2Q96L46 248 aa18.34■□□□□ 0.53
CLDN11-208ENST00000488989 TRERF1Q96PN7 1200 aa18.34■□□□□ 0.53
CLDN11-208ENST00000488989 TXNRD2Q9NNW7 524 aa18.34■□□□□ 0.53
CLDN11-208ENST00000488989 RNF146Q9NTX7 359 aa18.34■□□□□ 0.53
CLDN11-208ENST00000488989 MORF4L1Q9UBU8 362 aa18.34■□□□□ 0.53
CLDN11-208ENST00000488989 THSD7BQ9C0I4 1608 aa18.34■□□□□ 0.53
CLDN11-208ENST00000488989 LCTP09848 1927 aa18.33■□□□□ 0.53
CLDN11-208ENST00000488989 BAG4O95429 457 aaKnown RBP18.33■□□□□ 0.52
CLDN11-208ENST00000488989 SLC25A27O95847 323 aa18.33■□□□□ 0.52
CLDN11-208ENST00000488989 HSD17B4P51659 736 aa18.33■□□□□ 0.52
CLDN11-208ENST00000488989 NOM1Q5C9Z4 860 aaKnown RBP18.33■□□□□ 0.52
CLDN11-208ENST00000488989 MUM1L1Q5H9M0 696 aa18.33■□□□□ 0.52
CLDN11-208ENST00000488989 FAM173BQ6P4H8 233 aa18.33■□□□□ 0.52
CLDN11-208ENST00000488989 RASGRP4Q8TDF6 673 aa18.33■□□□□ 0.52
CLDN11-208ENST00000488989 ZIC5Q96T25 663 aa18.33■□□□□ 0.52
CLDN11-208ENST00000488989 BIN2Q9UBW5 565 aaPredicted RBP18.33■□□□□ 0.52
CLDN11-208ENST00000488989 GCOM1H8Y6P7 765 aaPredicted RBP18.32■□□□□ 0.52
CLDN11-208ENST00000488989 NFIBO00712 420 aa18.32■□□□□ 0.52
CLDN11-208ENST00000488989 FOSP01100 380 aaPredicted RBP18.32■□□□□ 0.52
CLDN11-208ENST00000488989 POLR2MP0CAP2 368 aa18.32■□□□□ 0.52
CLDN11-208ENST00000488989 TRAPPC10P48553 1259 aa18.32■□□□□ 0.52
CLDN11-208ENST00000488989 ERVK-9P63128 1117 aa18.32■□□□□ 0.52
CLDN11-208ENST00000488989 ERVK-24P63145 666 aa18.32■□□□□ 0.52
CLDN11-208ENST00000488989 UBE2SQ16763 222 aa18.32■□□□□ 0.52
CLDN11-208ENST00000488989 Q3C1V9 767 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms