RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 BSDC1Q9NW68 430 aaPredicted RBP6.4□□□□□ -1.38
SF3A3-207ENST00000488934 BIN2Q9UBW5 565 aaPredicted RBP6.4□□□□□ -1.38
SF3A3-207ENST00000488934 ZNRF3Q9ULT6 936 aa6.4□□□□□ -1.38
SF3A3-207ENST00000488934 A0A1B0GUL6 1792 aa6.39□□□□□ -1.39
SF3A3-207ENST00000488934 TRPA1O75762 1119 aa6.39□□□□□ -1.39
SF3A3-207ENST00000488934 DDNO94850 711 aaPredicted RBP6.39□□□□□ -1.39
SF3A3-207ENST00000488934 UFL1O94874 794 aa6.39□□□□□ -1.39
SF3A3-207ENST00000488934 CSF1RP07333 972 aa6.39□□□□□ -1.39
SF3A3-207ENST00000488934 HSPA6P17066 643 aa6.39□□□□□ -1.39
SF3A3-207ENST00000488934 CASP7P55210 303 aa6.39□□□□□ -1.39
SF3A3-207ENST00000488934 Q6ZS46 218 aa6.39□□□□□ -1.39
SF3A3-207ENST00000488934 SLC51AQ86UW1 340 aa6.39□□□□□ -1.39
SF3A3-207ENST00000488934 DZIP1LQ8IYY4 767 aaKnown RBP6.39□□□□□ -1.39
SF3A3-207ENST00000488934 ANKRD2Q9GZV1 360 aa6.39□□□□□ -1.39
SF3A3-207ENST00000488934 SOX17Q9H6I2 414 aaPredicted RBP6.39□□□□□ -1.39
SF3A3-207ENST00000488934 GREM2Q9H772 168 aa6.39□□□□□ -1.39
SF3A3-207ENST00000488934 HACL1Q9UJ83 578 aa6.39□□□□□ -1.39
SF3A3-207ENST00000488934 UTYO14607 1347 aa6.39□□□□□ -1.39
SF3A3-207ENST00000488934 ZNF541Q9H0D2 1346 aa6.39□□□□□ -1.39
SF3A3-207ENST00000488934 MED23Q9ULK4 1368 aa6.39□□□□□ -1.39
SF3A3-207ENST00000488934 ALX3O95076 343 aa6.38□□□□□ -1.39
SF3A3-207ENST00000488934 RPS12P25398 132 aaKnown RBP6.38□□□□□ -1.39
SF3A3-207ENST00000488934 KCNJ4P48050 445 aa6.38□□□□□ -1.39
SF3A3-207ENST00000488934 RARSP54136 660 aaKnown RBP6.38□□□□□ -1.39
SF3A3-207ENST00000488934 GPSM2P81274 684 aa6.38□□□□□ -1.39
SF3A3-207ENST00000488934 KCNA1Q09470 495 aa6.38□□□□□ -1.39
SF3A3-207ENST00000488934 ECM1Q16610 540 aa6.38□□□□□ -1.39
SF3A3-207ENST00000488934 ZMYM1Q5SVZ6 1142 aa6.38□□□□□ -1.39
SF3A3-207ENST00000488934 CIAPIN1Q6FI81 312 aa6.38□□□□□ -1.39
SF3A3-207ENST00000488934 LDHDQ86WU2 507 aa6.38□□□□□ -1.39
SF3A3-207ENST00000488934 TBC1D16Q8TBP0 767 aa6.38□□□□□ -1.39
SF3A3-207ENST00000488934 JARID2Q92833 1246 aaPredicted RBP6.38□□□□□ -1.39
SF3A3-207ENST00000488934 KLHDC7BQ96G42 594 aa6.38□□□□□ -1.39
SF3A3-207ENST00000488934 HHIPQ96QV1 700 aa6.38□□□□□ -1.39
SF3A3-207ENST00000488934 RBCK1Q9BYM8 510 aa6.38□□□□□ -1.39
SF3A3-207ENST00000488934 RNF208Q9H0X6 261 aa6.38□□□□□ -1.39
SF3A3-207ENST00000488934 LIN7BQ9HAP6 207 aa6.38□□□□□ -1.39
SF3A3-207ENST00000488934 LEMD3Q9Y2U8 911 aa6.38□□□□□ -1.39
SF3A3-207ENST00000488934 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.38□□□□□ -1.39
SF3A3-207ENST00000488934 COL4A5P29400 1685 aa6.38□□□□□ -1.39
SF3A3-207ENST00000488934 ADAMTSL1Q8N6G6 1762 aa6.37□□□□□ -1.39
SF3A3-207ENST00000488934 COL4A1P02462 1669 aa6.37□□□□□ -1.39
SF3A3-207ENST00000488934 ZNF609O15014 1411 aa6.37□□□□□ -1.39
SF3A3-207ENST00000488934 GSC2O15499 205 aa6.37□□□□□ -1.39
SF3A3-207ENST00000488934 DHX15O43143 795 aaKnown RBP6.37□□□□□ -1.39
SF3A3-207ENST00000488934 SART1O43290 800 aaKnown RBP6.37□□□□□ -1.39
SF3A3-207ENST00000488934 POLR3DP05423 398 aaPredicted RBP6.37□□□□□ -1.39
SF3A3-207ENST00000488934 UBTFL1P0CB47 393 aaPredicted RBP6.37□□□□□ -1.39
SF3A3-207ENST00000488934 EPHX2P34913 555 aa6.37□□□□□ -1.39
SF3A3-207ENST00000488934 FOXO4P98177 505 aa6.37□□□□□ -1.39
SF3A3-207ENST00000488934 RABL6Q3YEC7 729 aaPredicted RBP6.37□□□□□ -1.39
SF3A3-207ENST00000488934 PRSS36Q5K4E3 855 aa6.37□□□□□ -1.39
SF3A3-207ENST00000488934 HP1BP3Q5SSJ5 553 aaPredicted RBP6.37□□□□□ -1.39
SF3A3-207ENST00000488934 PEAR1Q5VY43 1037 aaPredicted RBP6.37□□□□□ -1.39
SF3A3-207ENST00000488934 ANKRD34AQ69YU3 496 aa6.37□□□□□ -1.39
SF3A3-207ENST00000488934 LMBR1LQ6UX01 489 aa6.37□□□□□ -1.39
SF3A3-207ENST00000488934 LDHAL6AQ6ZMR3 332 aa6.37□□□□□ -1.39
SF3A3-207ENST00000488934 PRR23CQ6ZRP0 262 aa6.37□□□□□ -1.39
SF3A3-207ENST00000488934 USP50Q70EL3 339 aaPredicted RBP6.37□□□□□ -1.39
SF3A3-207ENST00000488934 AGGF1Q8N302 714 aaeCLIP6.37□□□□□ -1.39
SF3A3-207ENST00000488934 ALKBH8Q96BT7 664 aaKnown RBP6.37□□□□□ -1.39
SF3A3-207ENST00000488934 RUSC1Q9BVN2 902 aa6.37□□□□□ -1.39
SF3A3-207ENST00000488934 TAF1DQ9H5J8 278 aaPredicted RBP6.37□□□□□ -1.39
SF3A3-207ENST00000488934 ZFYVE1Q9HBF4 777 aa6.37□□□□□ -1.39
SF3A3-207ENST00000488934 LATS2Q9NRM7 1088 aa6.37□□□□□ -1.39
SF3A3-207ENST00000488934 POLLQ9UGP5 575 aa6.37□□□□□ -1.39
SF3A3-207ENST00000488934 DCTN4Q9UJW0 460 aa6.37□□□□□ -1.39
SF3A3-207ENST00000488934 NOB1Q9ULX3 412 aaKnown RBP6.37□□□□□ -1.39
SF3A3-207ENST00000488934 MINPP1Q9UNW1 487 aa6.37□□□□□ -1.39
SF3A3-207ENST00000488934 ZNF804BA4D1E1 1349 aa6.36□□□□□ -1.39
SF3A3-207ENST00000488934 MROH5Q6ZUA9 1318 aa6.36□□□□□ -1.39
SF3A3-207ENST00000488934 MYO3BQ8WXR4 1341 aa6.36□□□□□ -1.39
SF3A3-207ENST00000488934 A0A1W2PP55 124 aa6.36□□□□□ -1.39
SF3A3-207ENST00000488934 H7C1D1 291 aa6.36□□□□□ -1.39
SF3A3-207ENST00000488934 ECE2O60344 883 aa6.36□□□□□ -1.39
SF3A3-207ENST00000488934 GNAI3P08754 354 aa6.36□□□□□ -1.39
SF3A3-207ENST00000488934 NBPF7P0C2Y1 421 aaPredicted RBP6.36□□□□□ -1.39
SF3A3-207ENST00000488934 MMP14P50281 582 aa6.36□□□□□ -1.39
SF3A3-207ENST00000488934 NLRP12P59046 1061 aa6.36□□□□□ -1.39
SF3A3-207ENST00000488934 CHRNDQ07001 517 aa6.36□□□□□ -1.39
SF3A3-207ENST00000488934 EAPPQ56P03 285 aaPredicted RBP6.36□□□□□ -1.39
SF3A3-207ENST00000488934 KIAA0319Q5VV43 1072 aa6.36□□□□□ -1.39
SF3A3-207ENST00000488934 ZKSCAN2Q63HK3 967 aa6.36□□□□□ -1.39
SF3A3-207ENST00000488934 FDX2Q6P4F2 183 aa6.36□□□□□ -1.39
SF3A3-207ENST00000488934 ADAMTSL4Q6UY14 1074 aa6.36□□□□□ -1.39
SF3A3-207ENST00000488934 ATF7IPQ6VMQ6 1270 aa6.36□□□□□ -1.39
SF3A3-207ENST00000488934 CCNJLQ8IV13 435 aa6.36□□□□□ -1.39
SF3A3-207ENST00000488934 FTSJ3Q8IY81 847 aaKnown RBP6.36□□□□□ -1.39
SF3A3-207ENST00000488934 FOXD4L4Q8WXT5 416 aaPredicted RBP6.36□□□□□ -1.39
SF3A3-207ENST00000488934 DPF2Q92785 391 aa6.36□□□□□ -1.39
SF3A3-207ENST00000488934 FRAT1Q92837 279 aaPredicted RBP6.36□□□□□ -1.39
SF3A3-207ENST00000488934 COA1Q9GZY4 146 aa6.36□□□□□ -1.39
SF3A3-207ENST00000488934 EHD4Q9H223 541 aa6.36□□□□□ -1.39
SF3A3-207ENST00000488934 CLEC4MQ9H2X3 399 aaPredicted RBP6.36□□□□□ -1.39
SF3A3-207ENST00000488934 BICC1Q9H694 974 aaKnown RBP6.36□□□□□ -1.39
SF3A3-207ENST00000488934 DBNDD1Q9H9R9 158 aa6.36□□□□□ -1.39
SF3A3-207ENST00000488934 CNNM1Q9NRU3 951 aa6.36□□□□□ -1.39
SF3A3-207ENST00000488934 ADARB2Q9NS39 739 aaKnown RBP6.36□□□□□ -1.39
SF3A3-207ENST00000488934 KCNK4Q9NYG8 393 aa6.36□□□□□ -1.39
SF3A3-207ENST00000488934 GPRC5DQ9NZD1 345 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms