RNA–Protein interactions for RNA: ENST00000488865.2

RNF220-216, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-216ENST00000488865 CYP39A1Q9NYL5 469 aa30.66■■■□□ 2.5
RNF220-216ENST00000488865 TBX21Q9UL17 535 aa30.66■■■□□ 2.5
RNF220-216ENST00000488865 A0A0U1RQG5 324 aaPredicted RBP30.65■■■□□ 2.5
RNF220-216ENST00000488865 TRIM6-TRIM34B2RNG4 842 aa30.65■■■□□ 2.5
RNF220-216ENST00000488865 PCP11498 1178 aaKnown RBP30.65■■■□□ 2.5
RNF220-216ENST00000488865 EPHB4P54760 987 aa30.65■■■□□ 2.5
RNF220-216ENST00000488865 NMIQ13287 307 aaPredicted RBP30.65■■■□□ 2.5
RNF220-216ENST00000488865 RRP12Q5JTH9 1297 aaKnown RBP30.65■■■□□ 2.5
RNF220-216ENST00000488865 ZNF589Q86UQ0 364 aaPredicted RBP30.65■■■□□ 2.5
RNF220-216ENST00000488865 SMC5Q8IY18 1101 aa30.65■■■□□ 2.5
RNF220-216ENST00000488865 VTI1AQ96AJ9 217 aa30.65■■■□□ 2.5
RNF220-216ENST00000488865 RNPC3Q96LT9 517 aaKnown RBP30.65■■■□□ 2.5
RNF220-216ENST00000488865 FAM161BQ96MY7 647 aa30.65■■■□□ 2.5
RNF220-216ENST00000488865 TMEM47Q9BQJ4 181 aa30.65■■■□□ 2.5
RNF220-216ENST00000488865 ARVCFO00192 962 aa30.64■■■□□ 2.5
RNF220-216ENST00000488865 TIMP1P01033 207 aa30.64■■■□□ 2.5
RNF220-216ENST00000488865 RWDD1Q9H446 243 aaPredicted RBP30.64■■■□□ 2.5
RNF220-216ENST00000488865 GNEQ9Y223 722 aaKnown RBP30.64■■■□□ 2.5
RNF220-216ENST00000488865 CCDC171Q6TFL3 1326 aa30.64■■■□□ 2.5
RNF220-216ENST00000488865 C11orf97A0A1B0GVM6 126 aaPredicted RBP30.63■■■□□ 2.49
RNF220-216ENST00000488865 TTBK2Q6IQ55 1244 aa30.63■■■□□ 2.49
RNF220-216ENST00000488865 TTC14Q96N46 770 aa30.63■■■□□ 2.49
RNF220-216ENST00000488865 ASTN1O14525 1302 aa30.63■■■□□ 2.49
RNF220-216ENST00000488865 SYDE2Q5VT97 1194 aa30.62■■■□□ 2.49
RNF220-216ENST00000488865 NOL8Q76FK4 1167 aaKnown RBP30.62■■■□□ 2.49
RNF220-216ENST00000488865 SEMA6BQ9H3T3 888 aa30.62■■■□□ 2.49
RNF220-216ENST00000488865 SLC16A2P36021 539 aa30.61■■■□□ 2.49
RNF220-216ENST00000488865 MFAP1P55081 439 aaKnown RBP30.61■■■□□ 2.49
RNF220-216ENST00000488865 AKNAD1Q5T1N1 836 aa30.61■■■□□ 2.49
RNF220-216ENST00000488865 IQSEC1Q6DN90 963 aa30.61■■■□□ 2.49
RNF220-216ENST00000488865 NSMFQ6X4W1 530 aa30.61■■■□□ 2.49
RNF220-216ENST00000488865 MFSD6Q6ZSS7 791 aa30.61■■■□□ 2.49
RNF220-216ENST00000488865 MORC4Q8TE76 937 aa30.61■■■□□ 2.49
RNF220-216ENST00000488865 RILPL2Q969X0 211 aa30.61■■■□□ 2.49
RNF220-216ENST00000488865 UNC80Q8N2C7 3258 aa30.61■■■□□ 2.49
RNF220-216ENST00000488865 LRRC37A2A6NM11 1700 aa30.6■■■□□ 2.49
RNF220-216ENST00000488865 CABYRO75952 493 aa30.6■■■□□ 2.49
RNF220-216ENST00000488865 HAND2P61296 217 aa30.6■■■□□ 2.49
RNF220-216ENST00000488865 BEX3Q00994 111 aa30.6■■■□□ 2.49
RNF220-216ENST00000488865 MFSD5Q6N075 450 aa30.6■■■□□ 2.49
RNF220-216ENST00000488865 TLK2Q86UE8 772 aa30.6■■■□□ 2.49
RNF220-216ENST00000488865 PNMA2Q9UL42 364 aa30.6■■■□□ 2.49
RNF220-216ENST00000488865 Q9Y3F1 56 aa30.6■■■□□ 2.49
RNF220-216ENST00000488865 TLR3O15455 904 aaKnown RBP30.59■■■□□ 2.49
RNF220-216ENST00000488865 PDHBP11177 359 aa30.59■■■□□ 2.49
RNF220-216ENST00000488865 SDSP20132 328 aa30.59■■■□□ 2.49
RNF220-216ENST00000488865 TAPT1Q6NXT6 567 aa30.59■■■□□ 2.49
RNF220-216ENST00000488865 FAM126BQ8IXS8 530 aa30.59■■■□□ 2.49
RNF220-216ENST00000488865 AP5M1Q9H0R1 490 aa30.59■■■□□ 2.49
RNF220-216ENST00000488865 OSBPL3Q9H4L5 887 aa30.59■■■□□ 2.49
RNF220-216ENST00000488865 RNF41Q9H4P4 317 aaPredicted RBP30.59■■■□□ 2.49
RNF220-216ENST00000488865 VTA1Q9NP79 307 aa30.59■■■□□ 2.49
RNF220-216ENST00000488865 GPCPD1Q9NPB8 672 aa30.59■■■□□ 2.49
RNF220-216ENST00000488865 ADD3Q9UEY8 706 aaKnown RBP30.59■■■□□ 2.49
RNF220-216ENST00000488865 FRMPD2Q68DX3 1309 aaPredicted RBP30.58■■■□□ 2.49
RNF220-216ENST00000488865 LOC102724159A0A0B4J2E5 919 aa30.58■■■□□ 2.49
RNF220-216ENST00000488865 SMPD1P17405 629 aa30.58■■■□□ 2.49
RNF220-216ENST00000488865 PWP2Q15269 919 aaKnown RBP30.58■■■□□ 2.49
RNF220-216ENST00000488865 FSCN1Q16658 493 aaKnown RBP30.58■■■□□ 2.49
RNF220-216ENST00000488865 B4GALNT3Q6L9W6 998 aa30.58■■■□□ 2.49
RNF220-216ENST00000488865 CHD1LQ86WJ1 897 aa30.58■■■□□ 2.49
RNF220-216ENST00000488865 CDX2Q99626 313 aaPredicted RBP30.58■■■□□ 2.49
RNF220-216ENST00000488865 LCTP09848 1927 aa30.57■■■□□ 2.48
RNF220-216ENST00000488865 TMEM265A0A087WTH1 108 aa30.57■■■□□ 2.48
RNF220-216ENST00000488865 PPIGQ13427 754 aaKnown RBP eCLIP30.57■■■□□ 2.482e-10■□□□□ 8.2
RNF220-216ENST00000488865 BAATQ14032 418 aaPredicted RBP30.57■■■□□ 2.48
RNF220-216ENST00000488865 CXCL17Q6UXB2 119 aa30.57■■■□□ 2.48
RNF220-216ENST00000488865 TBC1D10CQ8IV04 446 aa30.57■■■□□ 2.48
RNF220-216ENST00000488865 PLEKHM2Q8IWE5 1019 aa30.57■■■□□ 2.48
RNF220-216ENST00000488865 SLC43A3Q8NBI5 491 aa30.57■■■□□ 2.48
RNF220-216ENST00000488865 SEZ6LQ9BYH1 1024 aa30.57■■■□□ 2.48
RNF220-216ENST00000488865 PDGFCQ9NRA1 345 aa30.57■■■□□ 2.48
RNF220-216ENST00000488865 DDX49Q9Y6V7 483 aaKnown RBP30.57■■■□□ 2.48
RNF220-216ENST00000488865 DYNC1LI2O43237 492 aaPredicted RBP30.56■■■□□ 2.48
RNF220-216ENST00000488865 ZEB2O60315 1214 aa30.56■■■□□ 2.48
RNF220-216ENST00000488865 SNHG28P0DPA3 235 aa30.56■■■□□ 2.48
RNF220-216ENST00000488865 NT5C2P49902 561 aa30.56■■■□□ 2.48
RNF220-216ENST00000488865 NUCB1Q02818 461 aa30.56■■■□□ 2.48
RNF220-216ENST00000488865 EEPD1Q7L9B9 569 aa30.56■■■□□ 2.48
RNF220-216ENST00000488865 FBXO16Q8IX29 292 aaPredicted RBP30.56■■■□□ 2.48
RNF220-216ENST00000488865 PURBQ96QR8 312 aaKnown RBP30.56■■■□□ 2.48
RNF220-216ENST00000488865 TTYH1Q9H313 450 aaPredicted RBP30.56■■■□□ 2.48
RNF220-216ENST00000488865 EYSQ5T1H1 3165 aa30.55■■■□□ 2.48
RNF220-216ENST00000488865 HSFX4A0A1B0GTS1 333 aaPredicted RBP30.55■■■□□ 2.48
RNF220-216ENST00000488865 HSFX3A0A1B0GWH4 333 aaPredicted RBP30.55■■■□□ 2.48
RNF220-216ENST00000488865 NFIBO00712 420 aa30.55■■■□□ 2.48
RNF220-216ENST00000488865 CD4P01730 458 aa30.55■■■□□ 2.48
RNF220-216ENST00000488865 ZNF543Q08ER8 600 aa30.55■■■□□ 2.48
RNF220-216ENST00000488865 TMEM199Q8N511 208 aa30.55■■■□□ 2.48
RNF220-216ENST00000488865 ESR2Q92731 530 aa30.55■■■□□ 2.48
RNF220-216ENST00000488865 ALDH5A1P51649 535 aaPredicted RBP30.54■■■□□ 2.48
RNF220-216ENST00000488865 KIAA1211Q6ZU35 1233 aa30.54■■■□□ 2.48
RNF220-216ENST00000488865 BUD13Q9BRD0 619 aaKnown RBP eCLIP30.54■■■□□ 2.485e-7■■■■■ 32.9
RNF220-216ENST00000488865 CDH23Q9H251 3354 aa30.54■■■□□ 2.48
RNF220-216ENST00000488865 ZNF213O14771 459 aa30.53■■■□□ 2.48
RNF220-216ENST00000488865 ITGA7Q13683 1181 aa30.53■■■□□ 2.48
RNF220-216ENST00000488865 CLEC4DQ8WXI8 215 aa30.53■■■□□ 2.48
RNF220-216ENST00000488865 WDR19Q8NEZ3 1342 aa30.52■■■□□ 2.48
RNF220-216ENST00000488865 PTPDC1A2A3K4 754 aa30.52■■■□□ 2.48
RNF220-216ENST00000488865 IGHDP01880 384 aa30.52■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms