RNA–Protein interactions for RNA: ENST00000488590.1

SUPT20H-218, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 4

Gene SUPT20H, Length 572 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-218ENST00000488590 FAM50BQ9Y247 325 aa11.32□□□□□ -0.6
SUPT20H-218ENST00000488590 TNKSO95271 1327 aa11.32□□□□□ -0.6
SUPT20H-218ENST00000488590 USP24Q9UPU5 2620 aa11.31□□□□□ -0.6
SUPT20H-218ENST00000488590 MBTPS2O43462 519 aa11.31□□□□□ -0.6
SUPT20H-218ENST00000488590 DLX2Q07687 328 aaPredicted RBP11.31□□□□□ -0.6
SUPT20H-218ENST00000488590 TCTN1Q2MV58 587 aa11.31□□□□□ -0.6
SUPT20H-218ENST00000488590 CTC1Q2NKJ3 1217 aa11.31□□□□□ -0.6
SUPT20H-218ENST00000488590 TCEAL5Q5H9L2 206 aa11.31□□□□□ -0.6
SUPT20H-218ENST00000488590 ARMCX2Q7L311 632 aa11.31□□□□□ -0.6
SUPT20H-218ENST00000488590 RAD9AQ99638 391 aa11.31□□□□□ -0.6
SUPT20H-218ENST00000488590 VCPKMTQ9H867 229 aa11.31□□□□□ -0.6
SUPT20H-218ENST00000488590 CEP250Q9BV73 2442 aa11.31□□□□□ -0.6
SUPT20H-218ENST00000488590 TANC1Q9C0D5 1861 aa11.31□□□□□ -0.6
SUPT20H-218ENST00000488590 PITPNM1O00562 1244 aa11.3□□□□□ -0.6
SUPT20H-218ENST00000488590 WDR46O15213 610 aaKnown RBP11.3□□□□□ -0.6
SUPT20H-218ENST00000488590 CYP2E1P05181 493 aaPredicted RBP11.3□□□□□ -0.6
SUPT20H-218ENST00000488590 SUPT20HL2P0C7V6 817 aa11.3□□□□□ -0.6
SUPT20H-218ENST00000488590 COPB2P35606 906 aa11.3□□□□□ -0.6
SUPT20H-218ENST00000488590 TNFAIP2Q03169 654 aa11.3□□□□□ -0.6
SUPT20H-218ENST00000488590 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.3□□□□□ -0.6
SUPT20H-218ENST00000488590 TTC6Q86TZ1 520 aa11.3□□□□□ -0.6
SUPT20H-218ENST00000488590 TLK2Q86UE8 772 aa11.3□□□□□ -0.6
SUPT20H-218ENST00000488590 CCDC144CPQ8IYA2 1237 aa11.3□□□□□ -0.6
SUPT20H-218ENST00000488590 BANK1Q8NDB2 785 aa11.3□□□□□ -0.6
SUPT20H-218ENST00000488590 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.3□□□□□ -0.6
SUPT20H-218ENST00000488590 RMDN1Q96DB5 314 aa11.3□□□□□ -0.6
SUPT20H-218ENST00000488590 DDX11Q96FC9 970 aa11.3□□□□□ -0.6
SUPT20H-218ENST00000488590 POP1Q99575 1024 aaKnown RBP11.3□□□□□ -0.6
SUPT20H-218ENST00000488590 PPP1R9AQ9ULJ8 1098 aa11.3□□□□□ -0.6
SUPT20H-218ENST00000488590 MAP1BP46821 2468 aaKnown RBP11.3□□□□□ -0.6
SUPT20H-218ENST00000488590 FRYLO94915 3013 aa11.29□□□□□ -0.6
SUPT20H-218ENST00000488590 SMPD1P17405 629 aa11.29□□□□□ -0.6
SUPT20H-218ENST00000488590 MRPL50Q8N5N7 158 aaKnown RBP11.29□□□□□ -0.6
SUPT20H-218ENST00000488590 FTOQ9C0B1 505 aaKnown RBP eCLIP11.29□□□□□ -0.6
SUPT20H-218ENST00000488590 SNRKQ9NRH2 765 aa11.29□□□□□ -0.6
SUPT20H-218ENST00000488590 AKAP2Q9Y2D5 859 aa11.29□□□□□ -0.6
SUPT20H-218ENST00000488590 MYO5AQ9Y4I1 1855 aaKnown RBP11.29□□□□□ -0.6
SUPT20H-218ENST00000488590 DYNC1LI2O43237 492 aaPredicted RBP11.28□□□□□ -0.6
SUPT20H-218ENST00000488590 KCNJ6P48051 423 aa11.28□□□□□ -0.6
SUPT20H-218ENST00000488590 TIGD5Q53EQ6 642 aa11.28□□□□□ -0.6
SUPT20H-218ENST00000488590 WDR63Q8IWG1 891 aa11.28□□□□□ -0.6
SUPT20H-218ENST00000488590 ADSSL1Q8N142 457 aa11.28□□□□□ -0.6
SUPT20H-218ENST00000488590 FBXO22Q8NEZ5 403 aa11.28□□□□□ -0.6
SUPT20H-218ENST00000488590 NEUROD6Q96NK8 337 aa11.28□□□□□ -0.6
SUPT20H-218ENST00000488590 ZBED2Q9BTP6 218 aa11.28□□□□□ -0.6
SUPT20H-218ENST00000488590 TEX13BQ9BXU2 312 aa11.28□□□□□ -0.6
SUPT20H-218ENST00000488590 PIH1D3Q9NQM4 214 aaKnown RBP11.28□□□□□ -0.6
SUPT20H-218ENST00000488590 CLDND1Q9NY35 253 aa11.28□□□□□ -0.6
SUPT20H-218ENST00000488590 LOC730098B7Z3J9 87 aa11.27□□□□□ -0.61
SUPT20H-218ENST00000488590 STXBP3O00186 592 aa11.27□□□□□ -0.61
SUPT20H-218ENST00000488590 MPHOSPH10O00566 681 aaKnown RBP11.27□□□□□ -0.61
SUPT20H-218ENST00000488590 GALR2O43603 387 aaPredicted RBP11.27□□□□□ -0.61
SUPT20H-218ENST00000488590 NUBP1P53384 320 aa11.27□□□□□ -0.61
SUPT20H-218ENST00000488590 SIGLEC14Q08ET2 396 aa11.27□□□□□ -0.61
SUPT20H-218ENST00000488590 CBX2Q14781 532 aaPredicted RBP11.27□□□□□ -0.61
SUPT20H-218ENST00000488590 CLUL1Q15846 466 aa11.27□□□□□ -0.61
SUPT20H-218ENST00000488590 SNRNP48Q6IEG0 339 aaKnown RBP11.27□□□□□ -0.61
SUPT20H-218ENST00000488590 TMEM179Q6ZVK1 233 aa11.27□□□□□ -0.61
SUPT20H-218ENST00000488590 RPAINQ86UA6 219 aa11.27□□□□□ -0.61
SUPT20H-218ENST00000488590 MIGA1Q8NAN2 632 aa11.27□□□□□ -0.61
SUPT20H-218ENST00000488590 SP7Q8TDD2 431 aaPredicted RBP11.27□□□□□ -0.61
SUPT20H-218ENST00000488590 PPP1R13LQ8WUF5 828 aa11.27□□□□□ -0.61
SUPT20H-218ENST00000488590 CTAGE1Q96RT6 745 aa11.27□□□□□ -0.61
SUPT20H-218ENST00000488590 PDGFCQ9NRA1 345 aa11.27□□□□□ -0.61
SUPT20H-218ENST00000488590 CTNNA3Q9UI47 895 aa11.27□□□□□ -0.61
SUPT20H-218ENST00000488590 DDX49Q9Y6V7 483 aaKnown RBP11.27□□□□□ -0.61
SUPT20H-218ENST00000488590 SPTBN2O15020 2390 aa11.27□□□□□ -0.61
SUPT20H-218ENST00000488590 ANKRD11Q6UB99 2663 aaPredicted RBP11.27□□□□□ -0.61
SUPT20H-218ENST00000488590 H3BNC9 293 aa11.26□□□□□ -0.61
SUPT20H-218ENST00000488590 ATP2A1O14983 1001 aa11.26□□□□□ -0.61
SUPT20H-218ENST00000488590 PDGFBP01127 241 aaPredicted RBP11.26□□□□□ -0.61
SUPT20H-218ENST00000488590 USP5P45974 858 aa11.26□□□□□ -0.61
SUPT20H-218ENST00000488590 PURAQ00577 322 aaKnown RBP11.26□□□□□ -0.61
SUPT20H-218ENST00000488590 CNTN2Q02246 1040 aa11.26□□□□□ -0.61
SUPT20H-218ENST00000488590 SMAD4Q13485 552 aaKnown RBP11.26□□□□□ -0.61
SUPT20H-218ENST00000488590 PTPROQ16827 1216 aa11.26□□□□□ -0.61
SUPT20H-218ENST00000488590 EPC2Q52LR7 807 aa11.26□□□□□ -0.61
SUPT20H-218ENST00000488590 TAPT1Q6NXT6 567 aa11.26□□□□□ -0.61
SUPT20H-218ENST00000488590 EP400NLQ6ZTU2 488 aa11.26□□□□□ -0.61
SUPT20H-218ENST00000488590 NSUN3Q9H649 340 aaKnown RBP11.26□□□□□ -0.61
SUPT20H-218ENST00000488590 Q9Y3F1 56 aa11.26□□□□□ -0.61
SUPT20H-218ENST00000488590 PTPRCP08575 1304 aa11.26□□□□□ -0.61
SUPT20H-218ENST00000488590 ATG2AQ2TAZ0 1938 aa11.25□□□□□ -0.61
SUPT20H-218ENST00000488590 SCN10AQ9Y5Y9 1956 aa11.25□□□□□ -0.61
SUPT20H-218ENST00000488590 ZEB2O60315 1214 aa11.25□□□□□ -0.61
SUPT20H-218ENST00000488590 IGSF3O75054 1194 aa11.25□□□□□ -0.61
SUPT20H-218ENST00000488590 TBX10O75333 385 aa11.25□□□□□ -0.61
SUPT20H-218ENST00000488590 CXCL10P02778 98 aa11.25□□□□□ -0.61
SUPT20H-218ENST00000488590 UQCRFS1P1P0C7P4 283 aa11.25□□□□□ -0.61
SUPT20H-218ENST00000488590 AKR1B1P15121 316 aa11.25□□□□□ -0.61
SUPT20H-218ENST00000488590 CYP7A1P22680 504 aa11.25□□□□□ -0.61
SUPT20H-218ENST00000488590 HTRA4P83105 476 aaPredicted RBP11.25□□□□□ -0.61
SUPT20H-218ENST00000488590 MKRN4PQ13434 485 aaPredicted RBP11.25□□□□□ -0.61
SUPT20H-218ENST00000488590 NOL8Q76FK4 1167 aaKnown RBP11.25□□□□□ -0.61
SUPT20H-218ENST00000488590 DGLUCYQ7Z3D6 616 aa11.25□□□□□ -0.61
SUPT20H-218ENST00000488590 FRMD5Q7Z6J6 570 aa11.25□□□□□ -0.61
SUPT20H-218ENST00000488590 FAM133AQ8N9E0 248 aa11.25□□□□□ -0.61
SUPT20H-218ENST00000488590 RETREG2Q8NC44 543 aa11.25□□□□□ -0.61
SUPT20H-218ENST00000488590 AP5M1Q9H0R1 490 aa11.25□□□□□ -0.61
SUPT20H-218ENST00000488590 PRKRIP1Q9H875 184 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms