RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 PSTPIP2Q9H939 334 aa22.99■■□□□ 1.27
NECAB3-213ENST00000488489 ZNF165P49910 485 aa22.98■■□□□ 1.27
NECAB3-213ENST00000488489 MDM2Q00987 491 aaPredicted RBP22.98■■□□□ 1.27
NECAB3-213ENST00000488489 CUL5Q93034 780 aa22.98■■□□□ 1.27
NECAB3-213ENST00000488489 SERTAD1Q9UHV2 236 aa22.98■■□□□ 1.27
NECAB3-213ENST00000488489 PRR12Q9ULL5 1215 aa22.98■■□□□ 1.27
NECAB3-213ENST00000488489 CCNT1O60563 726 aaKnown RBP22.97■■□□□ 1.27
NECAB3-213ENST00000488489 DDNO94850 711 aaPredicted RBP22.97■■□□□ 1.27
NECAB3-213ENST00000488489 USP25Q9UHP3 1055 aa22.97■■□□□ 1.27
NECAB3-213ENST00000488489 SMCHD1A6NHR9 2005 aa22.97■■□□□ 1.27
NECAB3-213ENST00000488489 ACTN4O43707 911 aaKnown RBP22.97■■□□□ 1.27
NECAB3-213ENST00000488489 STAT2P52630 851 aa22.97■■□□□ 1.27
NECAB3-213ENST00000488489 BIN1O00499 593 aa22.96■■□□□ 1.27
NECAB3-213ENST00000488489 PTMAP06454 111 aaKnown RBP22.96■■□□□ 1.27
NECAB3-213ENST00000488489 TAL1P17542 331 aaPredicted RBP22.96■■□□□ 1.27
NECAB3-213ENST00000488489 MRPL12P52815 198 aaKnown RBP22.96■■□□□ 1.27
NECAB3-213ENST00000488489 TUBE1Q9UJT0 475 aa22.96■■□□□ 1.27
NECAB3-213ENST00000488489 USP17L15C9J2P7 530 aa22.96■■□□□ 1.27
NECAB3-213ENST00000488489 USP17L13C9JLJ4 530 aa22.96■■□□□ 1.27
NECAB3-213ENST00000488489 USP17L11C9JVI0 530 aa22.96■■□□□ 1.27
NECAB3-213ENST00000488489 USP17L18D6R9N7 530 aa22.96■■□□□ 1.27
NECAB3-213ENST00000488489 USP17L22D6RA61 530 aa22.96■■□□□ 1.27
NECAB3-213ENST00000488489 USP17L17D6RBQ6 530 aa22.96■■□□□ 1.27
NECAB3-213ENST00000488489 USP17L19D6RCP7 530 aa22.96■■□□□ 1.27
NECAB3-213ENST00000488489 USP17L20D6RJB6 530 aa22.96■■□□□ 1.27
NECAB3-213ENST00000488489 AP5Z1O43299 807 aa22.96■■□□□ 1.27
NECAB3-213ENST00000488489 USP17L24Q0WX57 530 aa22.96■■□□□ 1.27
NECAB3-213ENST00000488489 USP17L6PQ6QN14 398 aa22.96■■□□□ 1.27
NECAB3-213ENST00000488489 ELOA2Q8IYF1 753 aaPredicted RBP22.96■■□□□ 1.27
NECAB3-213ENST00000488489 AMNQ9BXJ7 453 aa22.96■■□□□ 1.27
NECAB3-213ENST00000488489 ZNF341Q9BYN7 854 aa22.96■■□□□ 1.27
NECAB3-213ENST00000488489 ANO10Q9NW15 660 aa22.96■■□□□ 1.27
NECAB3-213ENST00000488489 GGA3Q9NZ52 723 aa22.96■■□□□ 1.27
NECAB3-213ENST00000488489 RNF181Q9P0P0 153 aa22.96■■□□□ 1.27
NECAB3-213ENST00000488489 CDC25AP30304 524 aa22.95■■□□□ 1.26
NECAB3-213ENST00000488489 INPP5BP32019 993 aa22.95■■□□□ 1.26
NECAB3-213ENST00000488489 PDCL3Q9H2J4 239 aa22.95■■□□□ 1.26
NECAB3-213ENST00000488489 FZD1Q9UP38 647 aa22.95■■□□□ 1.26
NECAB3-213ENST00000488489 CTNND1O60716 968 aaKnown RBP22.94■■□□□ 1.26
NECAB3-213ENST00000488489 DPCR1Q3MIW9 517 aa22.94■■□□□ 1.26
NECAB3-213ENST00000488489 USH1GQ495M9 461 aa22.94■■□□□ 1.26
NECAB3-213ENST00000488489 FBXO11Q86XK2 927 aa22.94■■□□□ 1.26
NECAB3-213ENST00000488489 APOBEC3FQ8IUX4 373 aaKnown RBP22.94■■□□□ 1.26
NECAB3-213ENST00000488489 GRAMD1CQ8IYS0 662 aa22.94■■□□□ 1.26
NECAB3-213ENST00000488489 DHX58Q96C10 678 aa22.94■■□□□ 1.26
NECAB3-213ENST00000488489 SH2D4AQ9H788 454 aa22.94■■□□□ 1.26
NECAB3-213ENST00000488489 POLR2AP24928 1970 aaKnown RBP22.94■■□□□ 1.26
NECAB3-213ENST00000488489 CAVIN2O95810 425 aa22.94■■□□□ 1.26
NECAB3-213ENST00000488489 LONP1P36776 959 aaKnown RBP22.94■■□□□ 1.26
NECAB3-213ENST00000488489 IQCB1Q15051 598 aa22.94■■□□□ 1.26
NECAB3-213ENST00000488489 DTHD1Q6ZMT9 781 aa22.94■■□□□ 1.26
NECAB3-213ENST00000488489 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.94■■□□□ 1.269e-7■■■□□ 17.2
NECAB3-213ENST00000488489 LAD1O00515 517 aa22.93■■□□□ 1.26
NECAB3-213ENST00000488489 MEIS2O14770 477 aa22.93■■□□□ 1.26
NECAB3-213ENST00000488489 PRR29P0C7W0 189 aa22.93■■□□□ 1.26
NECAB3-213ENST00000488489 ISM2Q6H9L7 571 aa22.93■■□□□ 1.26
NECAB3-213ENST00000488489 PCDHA5Q9Y5H7 936 aa22.93■■□□□ 1.26
NECAB3-213ENST00000488489 MYH7BA7E2Y1 1941 aa22.93■■□□□ 1.26
NECAB3-213ENST00000488489 NEMFO60524 1076 aa22.93■■□□□ 1.26
NECAB3-213ENST00000488489 P2RX7Q99572 595 aaKnown RBP22.93■■□□□ 1.26
NECAB3-213ENST00000488489 FBXO28Q9NVF7 368 aa22.93■■□□□ 1.26
NECAB3-213ENST00000488489 OPLAHO14841 1288 aa22.92■■□□□ 1.26
NECAB3-213ENST00000488489 TDP2O95551 362 aa22.92■■□□□ 1.26
NECAB3-213ENST00000488489 PRPHP41219 470 aa22.92■■□□□ 1.26
NECAB3-213ENST00000488489 DGKZQ13574 1117 aa22.92■■□□□ 1.26
NECAB3-213ENST00000488489 POSTNQ15063 836 aa22.92■■□□□ 1.26
NECAB3-213ENST00000488489 POTEDQ86YR6 584 aa22.92■■□□□ 1.26
NECAB3-213ENST00000488489 KIFC2Q96AC6 838 aa22.92■■□□□ 1.26
NECAB3-213ENST00000488489 PP2D1A8MPX8 630 aa22.91■■□□□ 1.26
NECAB3-213ENST00000488489 OR52Z1P0C646 297 aa22.91■■□□□ 1.26
NECAB3-213ENST00000488489 NLRP12P59046 1061 aa22.91■■□□□ 1.26
NECAB3-213ENST00000488489 E2F4Q16254 413 aa22.91■■□□□ 1.26
NECAB3-213ENST00000488489 FEZ1Q99689 392 aa22.91■■□□□ 1.26
NECAB3-213ENST00000488489 SLC37A4O43826 429 aa22.91■■□□□ 1.26
NECAB3-213ENST00000488489 SLFN14P0C7P3 912 aa22.91■■□□□ 1.26
NECAB3-213ENST00000488489 DCAF15Q66K64 600 aa22.91■■□□□ 1.26
NECAB3-213ENST00000488489 CHURC1Q8WUH1 139 aa22.91■■□□□ 1.26
NECAB3-213ENST00000488489 ZKSCAN4Q969J2 545 aaPredicted RBP22.91■■□□□ 1.26
NECAB3-213ENST00000488489 GLT8D2Q9H1C3 349 aa22.91■■□□□ 1.26
NECAB3-213ENST00000488489 ZNF112Q9UJU3 913 aa22.91■■□□□ 1.26
NECAB3-213ENST00000488489 UQCRHLA0A096LP55 91 aa22.9■■□□□ 1.26
NECAB3-213ENST00000488489 PLA2G6O60733 806 aa22.9■■□□□ 1.26
NECAB3-213ENST00000488489 UQCRHP07919 91 aa22.9■■□□□ 1.26
NECAB3-213ENST00000488489 C9orf131Q5VYM1 1079 aa22.9■■□□□ 1.26
NECAB3-213ENST00000488489 ADCY5O95622 1261 aa22.9■■□□□ 1.26
NECAB3-213ENST00000488489 PLCB2Q00722 1185 aa22.9■■□□□ 1.26
NECAB3-213ENST00000488489 ORC2Q13416 577 aaPredicted RBP22.9■■□□□ 1.26
NECAB3-213ENST00000488489 ZRSR1Q15695 479 aaKnown RBP22.9■■□□□ 1.26
NECAB3-213ENST00000488489 SH3RF1Q7Z6J0 888 aa22.9■■□□□ 1.26
NECAB3-213ENST00000488489 DHX40Q8IX18 779 aaKnown RBP22.9■■□□□ 1.26
NECAB3-213ENST00000488489 CEP57L1Q8IYX8 460 aa22.9■■□□□ 1.26
NECAB3-213ENST00000488489 MTMR9Q96QG7 549 aa22.9■■□□□ 1.26
NECAB3-213ENST00000488489 KIAA1683Q9H0B3 1180 aa22.9■■□□□ 1.26
NECAB3-213ENST00000488489 RANBP17Q9H2T7 1088 aaKnown RBP22.9■■□□□ 1.26
NECAB3-213ENST00000488489 GINM1Q9NU53 330 aa22.9■■□□□ 1.26
NECAB3-213ENST00000488489 KANK3Q6NY19 840 aa22.89■■□□□ 1.25
NECAB3-213ENST00000488489 PAGE5Q96GU1 130 aa22.89■■□□□ 1.25
NECAB3-213ENST00000488489 HOOK1Q9UJC3 728 aaKnown RBP22.89■■□□□ 1.25
NECAB3-213ENST00000488489 BMP6P22004 513 aa22.88■■□□□ 1.25
NECAB3-213ENST00000488489 SARSP49591 514 aaKnown RBP22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms