RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 TRIM59Q8IWR1 403 aa6.61□□□□□ -1.35
ITGB1-214ENST00000488427 SLC38A3Q99624 504 aa6.61□□□□□ -1.35
ITGB1-214ENST00000488427 CCDC113Q9H0I3 377 aa6.61□□□□□ -1.35
ITGB1-214ENST00000488427 CRTAC1Q9NQ79 661 aa6.61□□□□□ -1.35
ITGB1-214ENST00000488427 ST7Q9NRC1 585 aa6.61□□□□□ -1.35
ITGB1-214ENST00000488427 ERVK13-1Q9NX77 482 aa6.61□□□□□ -1.35
ITGB1-214ENST00000488427 SUSD2Q9UGT4 822 aa6.61□□□□□ -1.35
ITGB1-214ENST00000488427 GPR160Q9UJ42 338 aa6.61□□□□□ -1.35
ITGB1-214ENST00000488427 MINPP1Q9UNW1 487 aa6.61□□□□□ -1.35
ITGB1-214ENST00000488427 ERCC6Q03468 1493 aa6.6□□□□□ -1.35
ITGB1-214ENST00000488427 A0A1W2PQJ5 194 aa6.6□□□□□ -1.35
ITGB1-214ENST00000488427 C2orf71A6NGG8 1288 aa6.6□□□□□ -1.35
ITGB1-214ENST00000488427 B2RBV5 119 aa6.6□□□□□ -1.35
ITGB1-214ENST00000488427 FGF10O15520 208 aaPredicted RBP6.6□□□□□ -1.35
ITGB1-214ENST00000488427 NRDCO43847 1150 aa6.6□□□□□ -1.35
ITGB1-214ENST00000488427 PAMP19021 973 aa6.6□□□□□ -1.35
ITGB1-214ENST00000488427 HOXC12P31275 282 aa6.6□□□□□ -1.35
ITGB1-214ENST00000488427 CORO7P57737 925 aa6.6□□□□□ -1.35
ITGB1-214ENST00000488427 HSP90AA2PQ14568 343 aaPredicted RBP6.6□□□□□ -1.35
ITGB1-214ENST00000488427 NFE2L2Q16236 605 aa6.6□□□□□ -1.35
ITGB1-214ENST00000488427 DPH6Q7L8W6 267 aa6.6□□□□□ -1.35
ITGB1-214ENST00000488427 MKL1Q969V6 931 aa6.6□□□□□ -1.35
ITGB1-214ENST00000488427 PTCHD1Q96NR3 888 aa6.6□□□□□ -1.35
ITGB1-214ENST00000488427 FCRL3Q96P31 734 aaPredicted RBP6.6□□□□□ -1.35
ITGB1-214ENST00000488427 IPO9Q96P70 1041 aaKnown RBP6.6□□□□□ -1.35
ITGB1-214ENST00000488427 CYP26B1Q9NR63 512 aa6.6□□□□□ -1.35
ITGB1-214ENST00000488427 C19orf73Q9NVV2 129 aa6.6□□□□□ -1.35
ITGB1-214ENST00000488427 APEX2Q9UBZ4 518 aa6.6□□□□□ -1.35
ITGB1-214ENST00000488427 STXBP3O00186 592 aa6.59□□□□□ -1.35
ITGB1-214ENST00000488427 PDPK1O15530 556 aa6.59□□□□□ -1.35
ITGB1-214ENST00000488427 USP2O75604 605 aaPredicted RBP6.59□□□□□ -1.35
ITGB1-214ENST00000488427 APPP05067 770 aa6.59□□□□□ -1.35
ITGB1-214ENST00000488427 RASGRF1Q13972 1273 aa6.59□□□□□ -1.35
ITGB1-214ENST00000488427 SLC10A6Q3KNW5 377 aa6.59□□□□□ -1.35
ITGB1-214ENST00000488427 MTERF2Q49AM1 385 aa6.59□□□□□ -1.35
ITGB1-214ENST00000488427 RTP2Q5QGT7 225 aa6.59□□□□□ -1.35
ITGB1-214ENST00000488427 LCE4AQ5TA78 99 aa6.59□□□□□ -1.35
ITGB1-214ENST00000488427 SPOCD1Q6ZMY3 1216 aa6.59□□□□□ -1.35
ITGB1-214ENST00000488427 ZNF227Q86WZ6 799 aa6.59□□□□□ -1.35
ITGB1-214ENST00000488427 IRF2BP1Q8IU81 584 aa6.59□□□□□ -1.35
ITGB1-214ENST00000488427 CELF2-AS1Q8N7Q2 184 aa6.59□□□□□ -1.35
ITGB1-214ENST00000488427 HHIPL1Q96JK4 782 aa6.59□□□□□ -1.35
ITGB1-214ENST00000488427 G6PC3Q9BUM1 346 aa6.59□□□□□ -1.35
ITGB1-214ENST00000488427 NKX2-4Q9H2Z4 354 aa6.59□□□□□ -1.35
ITGB1-214ENST00000488427 GPR55Q9Y2T6 319 aaPredicted RBP6.59□□□□□ -1.35
ITGB1-214ENST00000488427 NPHP3-ACAD11A0A0J9YXS1 232 aa6.58□□□□□ -1.36
ITGB1-214ENST00000488427 FADS2P1A8MWK0 482 aa6.58□□□□□ -1.36
ITGB1-214ENST00000488427 L1CAMP32004 1257 aa6.58□□□□□ -1.36
ITGB1-214ENST00000488427 DPY19L1Q2PZI1 675 aa6.58□□□□□ -1.36
ITGB1-214ENST00000488427 GTF2IRD2BQ6EKJ0 949 aa6.58□□□□□ -1.36
ITGB1-214ENST00000488427 GTF2IRD2Q86UP8 949 aa6.58□□□□□ -1.36
ITGB1-214ENST00000488427 CABP7Q86V35 215 aa6.58□□□□□ -1.36
ITGB1-214ENST00000488427 ABLIM1O14639 778 aa6.57□□□□□ -1.36
ITGB1-214ENST00000488427 MYO1BO43795 1136 aa6.57□□□□□ -1.36
ITGB1-214ENST00000488427 ITGAVP06756 1048 aa6.57□□□□□ -1.36
ITGB1-214ENST00000488427 SNRPB2P08579 225 aaKnown RBP6.57□□□□□ -1.36
ITGB1-214ENST00000488427 IFNGR1P15260 489 aa6.57□□□□□ -1.36
ITGB1-214ENST00000488427 PNLIPP16233 465 aa6.57□□□□□ -1.36
ITGB1-214ENST00000488427 ZC3H12BQ5HYM0 836 aaKnown RBP6.57□□□□□ -1.36
ITGB1-214ENST00000488427 E4F1Q66K89 784 aaPredicted RBP6.57□□□□□ -1.36
ITGB1-214ENST00000488427 MRM1Q6IN84 353 aaKnown RBP6.57□□□□□ -1.36
ITGB1-214ENST00000488427 SLCO6A1Q86UG4 719 aa6.57□□□□□ -1.36
ITGB1-214ENST00000488427 MICAL1Q8TDZ2 1067 aa6.57□□□□□ -1.36
ITGB1-214ENST00000488427 KCTD13Q8WZ19 329 aa6.57□□□□□ -1.36
ITGB1-214ENST00000488427 MRGPRX3Q96LB0 322 aa6.57□□□□□ -1.36
ITGB1-214ENST00000488427 YBX2Q9Y2T7 364 aaKnown RBP6.57□□□□□ -1.36
ITGB1-214ENST00000488427 MSRB2Q9Y3D2 182 aa6.57□□□□□ -1.36
ITGB1-214ENST00000488427 NPHS1O60500 1241 aa6.56□□□□□ -1.36
ITGB1-214ENST00000488427 VAMP4O75379 141 aa6.56□□□□□ -1.36
ITGB1-214ENST00000488427 KCNJ6P48051 423 aa6.56□□□□□ -1.36
ITGB1-214ENST00000488427 KCNAB2Q13303 367 aa6.56□□□□□ -1.36
ITGB1-214ENST00000488427 HSF5Q4G112 596 aaPredicted RBP6.56□□□□□ -1.36
ITGB1-214ENST00000488427 ZNF513Q8N8E2 541 aaPredicted RBP6.56□□□□□ -1.36
ITGB1-214ENST00000488427 PMFBP1Q8TBY8 1022 aa6.56□□□□□ -1.36
ITGB1-214ENST00000488427 AARSD1Q9BTE6 412 aaKnown RBP6.56□□□□□ -1.36
ITGB1-214ENST00000488427 SHROOM4Q9ULL8 1493 aa6.55□□□□□ -1.36
ITGB1-214ENST00000488427 OR14I1A6ND48 311 aa6.55□□□□□ -1.36
ITGB1-214ENST00000488427 LRRC10BA6NIK2 292 aa6.55□□□□□ -1.36
ITGB1-214ENST00000488427 CCDC85CA6NKD9 419 aa6.55□□□□□ -1.36
ITGB1-214ENST00000488427 MPOP05164 745 aa6.55□□□□□ -1.36
ITGB1-214ENST00000488427 PDE6BP35913 854 aa6.55□□□□□ -1.36
ITGB1-214ENST00000488427 GTF2A2P52657 109 aa6.55□□□□□ -1.36
ITGB1-214ENST00000488427 CYP4F8P98187 520 aa6.55□□□□□ -1.36
ITGB1-214ENST00000488427 SCRN1Q12765 414 aa6.55□□□□□ -1.36
ITGB1-214ENST00000488427 ZPBP2Q6X784 338 aa6.55□□□□□ -1.36
ITGB1-214ENST00000488427 NLRX1Q86UT6 975 aa6.55□□□□□ -1.36
ITGB1-214ENST00000488427 NUP43Q8NFH3 380 aa6.55□□□□□ -1.36
ITGB1-214ENST00000488427 INTS4Q96HW7 963 aaKnown RBP6.55□□□□□ -1.36
ITGB1-214ENST00000488427 FAM84AQ96KN4 292 aa6.55□□□□□ -1.36
ITGB1-214ENST00000488427 DEPDC7Q96QD5 511 aa6.55□□□□□ -1.36
ITGB1-214ENST00000488427 SRPK1Q96SB4 655 aaKnown RBP6.55□□□□□ -1.36
ITGB1-214ENST00000488427 KRTAP4-2Q9BYR5 136 aa6.55□□□□□ -1.36
ITGB1-214ENST00000488427 RNF32Q9H0A6 362 aa6.55□□□□□ -1.36
ITGB1-214ENST00000488427 OSBPL2Q9H1P3 480 aa6.55□□□□□ -1.36
ITGB1-214ENST00000488427 EPB41L4BQ9H329 900 aa6.55□□□□□ -1.36
ITGB1-214ENST00000488427 C19orf44Q9H6X5 657 aa6.55□□□□□ -1.36
ITGB1-214ENST00000488427 TRAV20A0A0B4J274 112 aa6.54□□□□□ -1.36
ITGB1-214ENST00000488427 HRKO00198 91 aa6.54□□□□□ -1.36
ITGB1-214ENST00000488427 MEFVO15553 781 aaPredicted RBP6.54□□□□□ -1.36
ITGB1-214ENST00000488427 SCG5P05408 212 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms