RNA–Protein interactions for RNA: ENST00000488344.6

VAMP7-206, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 2

Gene VAMP7, Length 696 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-206ENST00000488344 FGRP09769 529 aa13.25□□□□□ -0.29
VAMP7-206ENST00000488344 TOP1P11387 765 aaKnown RBP13.25□□□□□ -0.29
VAMP7-206ENST00000488344 NOVP48745 357 aa13.25□□□□□ -0.29
VAMP7-206ENST00000488344 NKX3-2P78367 333 aa13.25□□□□□ -0.29
VAMP7-206ENST00000488344 TNFAIP2Q03169 654 aa13.25□□□□□ -0.29
VAMP7-206ENST00000488344 PPIGQ13427 754 aaKnown RBP eCLIP13.25□□□□□ -0.29
VAMP7-206ENST00000488344 PWP2Q15269 919 aaKnown RBP13.25□□□□□ -0.29
VAMP7-206ENST00000488344 C9orf50Q5SZB4 431 aa13.25□□□□□ -0.29
VAMP7-206ENST00000488344 FGD4Q96M96 766 aa13.25□□□□□ -0.29
VAMP7-206ENST00000488344 AGBL1Q96MI9 1066 aa13.25□□□□□ -0.29
VAMP7-206ENST00000488344 RWDD1Q9H446 243 aaPredicted RBP13.25□□□□□ -0.29
VAMP7-206ENST00000488344 RNF41Q9H4P4 317 aaPredicted RBP13.25□□□□□ -0.29
VAMP7-206ENST00000488344 IL17RBQ9NRM6 502 aa13.25□□□□□ -0.29
VAMP7-206ENST00000488344 ADD3Q9UEY8 706 aaKnown RBP13.25□□□□□ -0.29
VAMP7-206ENST00000488344 PRR12Q9ULL5 1215 aa13.25□□□□□ -0.29
VAMP7-206ENST00000488344 COL11A1P12107 1806 aaPredicted RBP13.25□□□□□ -0.29
VAMP7-206ENST00000488344 TRIM6-TRIM34B2RNG4 842 aa13.24□□□□□ -0.29
VAMP7-206ENST00000488344 ARVCFO00192 962 aa13.24□□□□□ -0.29
VAMP7-206ENST00000488344 TIMP1P01033 207 aa13.24□□□□□ -0.29
VAMP7-206ENST00000488344 CNTN2Q02246 1040 aa13.24□□□□□ -0.29
VAMP7-206ENST00000488344 FAAP100Q0VG06 881 aa13.24□□□□□ -0.29
VAMP7-206ENST00000488344 VPS53Q5VIR6 699 aa13.24□□□□□ -0.29
VAMP7-206ENST00000488344 TTC14Q96N46 770 aa13.24□□□□□ -0.29
VAMP7-206ENST00000488344 MPHOSPH6Q99547 160 aaKnown RBP13.24□□□□□ -0.29
VAMP7-206ENST00000488344 AP5M1Q9H0R1 490 aa13.24□□□□□ -0.29
VAMP7-206ENST00000488344 LTBP2Q14767 1821 aa13.23□□□□□ -0.29
VAMP7-206ENST00000488344 CCDC171Q6TFL3 1326 aa13.23□□□□□ -0.29
VAMP7-206ENST00000488344 A0A0D9SFI3 127 aa13.23□□□□□ -0.29
VAMP7-206ENST00000488344 NMT2O60551 498 aa13.23□□□□□ -0.29
VAMP7-206ENST00000488344 FGAP02671 866 aa13.23□□□□□ -0.29
VAMP7-206ENST00000488344 CCDC178Q5BJE1 867 aa13.23□□□□□ -0.29
VAMP7-206ENST00000488344 RRP12Q5JTH9 1297 aaKnown RBP13.23□□□□□ -0.29
VAMP7-206ENST00000488344 SYDE2Q5VT97 1194 aa13.23□□□□□ -0.29
VAMP7-206ENST00000488344 IQSEC1Q6DN90 963 aa13.23□□□□□ -0.29
VAMP7-206ENST00000488344 MFSD5Q6N075 450 aa13.23□□□□□ -0.29
VAMP7-206ENST00000488344 BTNL9Q6UXG8 535 aa13.23□□□□□ -0.29
VAMP7-206ENST00000488344 NSMFQ6X4W1 530 aa13.23□□□□□ -0.29
VAMP7-206ENST00000488344 MFSD6Q6ZSS7 791 aa13.23□□□□□ -0.29
VAMP7-206ENST00000488344 TLK2Q86UE8 772 aa13.23□□□□□ -0.29
VAMP7-206ENST00000488344 TMEM199Q8N511 208 aa13.23□□□□□ -0.29
VAMP7-206ENST00000488344 KATNBL1Q9H079 304 aa13.23□□□□□ -0.29
VAMP7-206ENST00000488344 RANBP17Q9H2T7 1088 aaKnown RBP13.23□□□□□ -0.29
VAMP7-206ENST00000488344 VTA1Q9NP79 307 aa13.23□□□□□ -0.29
VAMP7-206ENST00000488344 CYP39A1Q9NYL5 469 aa13.23□□□□□ -0.29
VAMP7-206ENST00000488344 TBX21Q9UL17 535 aa13.23□□□□□ -0.29
VAMP7-206ENST00000488344 MTMR7Q9Y216 660 aa13.23□□□□□ -0.29
VAMP7-206ENST00000488344 Q9Y3F1 56 aa13.23□□□□□ -0.29
VAMP7-206ENST00000488344 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.22□□□□□ -0.29
VAMP7-206ENST00000488344 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.22□□□□□ -0.29
VAMP7-206ENST00000488344 MYADML2A6NDP7 307 aa13.22□□□□□ -0.29
VAMP7-206ENST00000488344 SOWAHBA6NEL2 793 aa13.22□□□□□ -0.29
VAMP7-206ENST00000488344 HIP1O00291 1037 aa13.22□□□□□ -0.29
VAMP7-206ENST00000488344 HSPD1P10809 573 aaKnown RBP13.22□□□□□ -0.29
VAMP7-206ENST00000488344 ITGB8P26012 769 aa13.22□□□□□ -0.29
VAMP7-206ENST00000488344 CDK7P50613 346 aa13.22□□□□□ -0.29
VAMP7-206ENST00000488344 FSCN1Q16658 493 aaKnown RBP13.22□□□□□ -0.29
VAMP7-206ENST00000488344 ESR2Q92731 530 aa13.22□□□□□ -0.29
VAMP7-206ENST00000488344 RILPL2Q969X0 211 aa13.22□□□□□ -0.29
VAMP7-206ENST00000488344 FAM227BQ96M60 508 aa13.22□□□□□ -0.29
VAMP7-206ENST00000488344 FAM161BQ96MY7 647 aa13.22□□□□□ -0.29
VAMP7-206ENST00000488344 GUCD1Q96NT3 240 aa13.22□□□□□ -0.29
VAMP7-206ENST00000488344 MTIF3Q9H2K0 278 aaKnown RBP13.22□□□□□ -0.29
VAMP7-206ENST00000488344 B4DLN1 442 aa13.21□□□□□ -0.29
VAMP7-206ENST00000488344 ADCY6O43306 1168 aa13.21□□□□□ -0.29
VAMP7-206ENST00000488344 MRPL12P52815 198 aaKnown RBP13.21□□□□□ -0.29
VAMP7-206ENST00000488344 NMIQ13287 307 aaPredicted RBP13.21□□□□□ -0.29
VAMP7-206ENST00000488344 BRDTQ58F21 947 aaPredicted RBP13.21□□□□□ -0.29
VAMP7-206ENST00000488344 MUM1L1Q5H9M0 696 aa13.21□□□□□ -0.29
VAMP7-206ENST00000488344 AKNAD1Q5T1N1 836 aa13.21□□□□□ -0.29
VAMP7-206ENST00000488344 GPATCH4Q5T3I0 446 aaKnown RBP13.21□□□□□ -0.29
VAMP7-206ENST00000488344 PSRC1Q6PGN9 363 aaPredicted RBP13.21□□□□□ -0.29
VAMP7-206ENST00000488344 MORC4Q8TE76 937 aa13.21□□□□□ -0.29
VAMP7-206ENST00000488344 CHMP4CQ96CF2 233 aa13.21□□□□□ -0.29
VAMP7-206ENST00000488344 TMEM47Q9BQJ4 181 aa13.21□□□□□ -0.29
VAMP7-206ENST00000488344 LNPKQ9C0E8 428 aa13.21□□□□□ -0.29
VAMP7-206ENST00000488344 SEMA6BQ9H3T3 888 aa13.21□□□□□ -0.29
VAMP7-206ENST00000488344 INCENPQ9NQS7 918 aa13.21□□□□□ -0.29
VAMP7-206ENST00000488344 GNEQ9Y223 722 aaKnown RBP13.21□□□□□ -0.29
VAMP7-206ENST00000488344 MYH4Q9Y623 1939 aa13.21□□□□□ -0.3
VAMP7-206ENST00000488344 DNAH12Q6ZR08 3092 aa13.21□□□□□ -0.3
VAMP7-206ENST00000488344 PLXNA1Q9UIW2 1896 aa13.21□□□□□ -0.3
VAMP7-206ENST00000488344 WDR19Q8NEZ3 1342 aa13.2□□□□□ -0.3
VAMP7-206ENST00000488344 RAD50Q92878 1312 aa13.2□□□□□ -0.3
VAMP7-206ENST00000488344 PTPDC1A2A3K4 754 aa13.2□□□□□ -0.3
VAMP7-206ENST00000488344 GALR2O43603 387 aaPredicted RBP13.2□□□□□ -0.3
VAMP7-206ENST00000488344 PDHBP11177 359 aa13.2□□□□□ -0.3
VAMP7-206ENST00000488344 IQCA1Q86XH1 822 aa13.2□□□□□ -0.3
VAMP7-206ENST00000488344 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.2□□□□□ -0.3
VAMP7-206ENST00000488344 FAM126BQ8IXS8 530 aa13.2□□□□□ -0.3
VAMP7-206ENST00000488344 SMC5Q8IY18 1101 aa13.2□□□□□ -0.3
VAMP7-206ENST00000488344 CDX2Q99626 313 aaPredicted RBP13.2□□□□□ -0.3
VAMP7-206ENST00000488344 MAF1Q9H063 256 aa13.2□□□□□ -0.3
VAMP7-206ENST00000488344 DIAPH3Q9NSV4 1193 aa13.2□□□□□ -0.3
VAMP7-206ENST00000488344 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.19□□□□□ -0.3
VAMP7-206ENST00000488344 ZNF213O14771 459 aa13.19□□□□□ -0.3
VAMP7-206ENST00000488344 CTAGE5O15320 804 aa13.19□□□□□ -0.3
VAMP7-206ENST00000488344 DYNC1LI2O43237 492 aaPredicted RBP13.19□□□□□ -0.3
VAMP7-206ENST00000488344 SMPD1P17405 629 aa13.19□□□□□ -0.3
VAMP7-206ENST00000488344 SDSP20132 328 aa13.19□□□□□ -0.3
VAMP7-206ENST00000488344 SLC16A2P36021 539 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms