RNA–Protein interactions for RNA: ENST00000488235.1

PCYT1A-215, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-215ENST00000488235 PDHBP11177 359 aa13.25□□□□□ -0.29
PCYT1A-215ENST00000488235 TOP1P11387 765 aaKnown RBP13.25□□□□□ -0.29
PCYT1A-215ENST00000488235 PDE4AP27815 886 aa13.25□□□□□ -0.29
PCYT1A-215ENST00000488235 FAAP100Q0VG06 881 aa13.25□□□□□ -0.29
PCYT1A-215ENST00000488235 AKNAD1Q5T1N1 836 aa13.25□□□□□ -0.29
PCYT1A-215ENST00000488235 GPR153Q6NV75 609 aa13.25□□□□□ -0.29
PCYT1A-215ENST00000488235 CWC27Q6UX04 472 aaKnown RBP13.25□□□□□ -0.29
PCYT1A-215ENST00000488235 BTNL9Q6UXG8 535 aa13.25□□□□□ -0.29
PCYT1A-215ENST00000488235 ZKSCAN3Q9BRR0 538 aa13.25□□□□□ -0.29
PCYT1A-215ENST00000488235 TSEN34Q9BSV6 310 aaKnown RBP13.25□□□□□ -0.29
PCYT1A-215ENST00000488235 UPF3AQ9H1J1 476 aaKnown RBP13.25□□□□□ -0.29
PCYT1A-215ENST00000488235 CPVLQ9H3G5 476 aa13.25□□□□□ -0.29
PCYT1A-215ENST00000488235 PDGFCQ9NRA1 345 aa13.25□□□□□ -0.29
PCYT1A-215ENST00000488235 TCP11L1Q9NUJ3 509 aa13.25□□□□□ -0.29
PCYT1A-215ENST00000488235 CYP39A1Q9NYL5 469 aa13.25□□□□□ -0.29
PCYT1A-215ENST00000488235 CCPG1Q9ULG6 757 aa13.25□□□□□ -0.29
PCYT1A-215ENST00000488235 CUL9Q8IWT3 2517 aa13.25□□□□□ -0.29
PCYT1A-215ENST00000488235 LRRC37A2A6NM11 1700 aa13.25□□□□□ -0.29
PCYT1A-215ENST00000488235 MUC3AQ02505 3323 aa13.24□□□□□ -0.29
PCYT1A-215ENST00000488235 ICAM1P05362 532 aa13.24□□□□□ -0.29
PCYT1A-215ENST00000488235 ASGR1P07306 291 aa13.24□□□□□ -0.29
PCYT1A-215ENST00000488235 CLTBP09497 229 aa13.24□□□□□ -0.29
PCYT1A-215ENST00000488235 C6orf222P0C671 652 aaPredicted RBP13.24□□□□□ -0.29
PCYT1A-215ENST00000488235 GJA9P57773 515 aa13.24□□□□□ -0.29
PCYT1A-215ENST00000488235 BEX3Q00994 111 aa13.24□□□□□ -0.29
PCYT1A-215ENST00000488235 AAMPQ13685 434 aa13.24□□□□□ -0.29
PCYT1A-215ENST00000488235 SYDE2Q5VT97 1194 aa13.24□□□□□ -0.29
PCYT1A-215ENST00000488235 ANKRD33Q7Z3H0 272 aa13.24□□□□□ -0.29
PCYT1A-215ENST00000488235 TICAM2Q86XR7 235 aa13.24□□□□□ -0.29
PCYT1A-215ENST00000488235 STARD7Q9NQZ5 370 aa13.24□□□□□ -0.29
PCYT1A-215ENST00000488235 REV3LO60673 3130 aa13.23□□□□□ -0.29
PCYT1A-215ENST00000488235 KIAA0355O15063 1070 aa13.23□□□□□ -0.29
PCYT1A-215ENST00000488235 SNHG28P0DPA3 235 aa13.23□□□□□ -0.29
PCYT1A-215ENST00000488235 CST5P28325 142 aaPredicted RBP13.23□□□□□ -0.29
PCYT1A-215ENST00000488235 CDK7P50613 346 aa13.23□□□□□ -0.29
PCYT1A-215ENST00000488235 ZNF543Q08ER8 600 aa13.23□□□□□ -0.29
PCYT1A-215ENST00000488235 BAATQ14032 418 aaPredicted RBP13.23□□□□□ -0.29
PCYT1A-215ENST00000488235 TKFCQ3LXA3 575 aa13.23□□□□□ -0.29
PCYT1A-215ENST00000488235 PPP4R3BQ5MIZ7 849 aa13.23□□□□□ -0.29
PCYT1A-215ENST00000488235 TAPT1Q6NXT6 567 aa13.23□□□□□ -0.29
PCYT1A-215ENST00000488235 NSMFQ6X4W1 530 aa13.23□□□□□ -0.29
PCYT1A-215ENST00000488235 MFSD6Q6ZSS7 791 aa13.23□□□□□ -0.29
PCYT1A-215ENST00000488235 EEPD1Q7L9B9 569 aa13.23□□□□□ -0.29
PCYT1A-215ENST00000488235 FBXO16Q8IX29 292 aaPredicted RBP13.23□□□□□ -0.29
PCYT1A-215ENST00000488235 CLEC4DQ8WXI8 215 aa13.23□□□□□ -0.29
PCYT1A-215ENST00000488235 FAM161BQ96MY7 647 aa13.23□□□□□ -0.29
PCYT1A-215ENST00000488235 GNEQ9Y223 722 aaKnown RBP13.23□□□□□ -0.29
PCYT1A-215ENST00000488235 SUPT16HQ9Y5B9 1047 aaKnown RBP13.23□□□□□ -0.29
PCYT1A-215ENST00000488235 XIRP2A4UGR9 3374 aa13.23□□□□□ -0.29
PCYT1A-215ENST00000488235 MOXD2PA6NHM9 499 aa13.22□□□□□ -0.29
PCYT1A-215ENST00000488235 GOLGA8HP0CJ92 632 aa13.22□□□□□ -0.29
PCYT1A-215ENST00000488235 GSPT1P15170 499 aaKnown RBP13.22□□□□□ -0.29
PCYT1A-215ENST00000488235 SMPD1P17405 629 aa13.22□□□□□ -0.29
PCYT1A-215ENST00000488235 IRX6P78412 446 aaPredicted RBP13.22□□□□□ -0.29
PCYT1A-215ENST00000488235 TNFAIP2Q03169 654 aa13.22□□□□□ -0.29
PCYT1A-215ENST00000488235 GNASQ5JWF2 1037 aa13.22□□□□□ -0.29
PCYT1A-215ENST00000488235 SLC30A10Q6XR72 485 aa13.22□□□□□ -0.29
PCYT1A-215ENST00000488235 GUCD1Q96NT3 240 aa13.22□□□□□ -0.29
PCYT1A-215ENST00000488235 TMEM39AQ9NV64 488 aa13.22□□□□□ -0.29
PCYT1A-215ENST00000488235 TBX21Q9UL17 535 aa13.22□□□□□ -0.29
PCYT1A-215ENST00000488235 GRIN2DO15399 1336 aa13.21□□□□□ -0.29
PCYT1A-215ENST00000488235 B4E1Z4 1266 aa13.21□□□□□ -0.29
PCYT1A-215ENST00000488235 NKX3-2P78367 333 aa13.21□□□□□ -0.29
PCYT1A-215ENST00000488235 CXCL17Q6UXB2 119 aa13.21□□□□□ -0.29
PCYT1A-215ENST00000488235 NUP133Q8WUM0 1156 aa13.21□□□□□ -0.29
PCYT1A-215ENST00000488235 DIAPH3Q9NSV4 1193 aa13.21□□□□□ -0.29
PCYT1A-215ENST00000488235 ELP1O95163 1332 aa13.2□□□□□ -0.3
PCYT1A-215ENST00000488235 ASB14A6NK59 587 aa13.2□□□□□ -0.3
PCYT1A-215ENST00000488235 ZNF213O14771 459 aa13.2□□□□□ -0.3
PCYT1A-215ENST00000488235 KDM4AO75164 1064 aa13.2□□□□□ -0.3
PCYT1A-215ENST00000488235 RAG1P15918 1043 aa13.2□□□□□ -0.3
PCYT1A-215ENST00000488235 NOL8Q76FK4 1167 aaKnown RBP13.2□□□□□ -0.3
PCYT1A-215ENST00000488235 TLK2Q86UE8 772 aa13.2□□□□□ -0.3
PCYT1A-215ENST00000488235 MORC4Q8TE76 937 aa13.2□□□□□ -0.3
PCYT1A-215ENST00000488235 GLT1D1Q96MS3 346 aa13.2□□□□□ -0.3
PCYT1A-215ENST00000488235 TTC14Q96N46 770 aa13.2□□□□□ -0.3
PCYT1A-215ENST00000488235 TOX2Q96NM4 488 aa13.2□□□□□ -0.3
PCYT1A-215ENST00000488235 UBA5Q9GZZ9 404 aa13.2□□□□□ -0.3
PCYT1A-215ENST00000488235 STXBP5LQ9Y2K9 1186 aa13.2□□□□□ -0.3
PCYT1A-215ENST00000488235 LAMA4Q16363 1823 aa13.2□□□□□ -0.3
PCYT1A-215ENST00000488235 ARVCFO00192 962 aa13.19□□□□□ -0.3
PCYT1A-215ENST00000488235 DYNC1LI2O43237 492 aaPredicted RBP13.19□□□□□ -0.3
PCYT1A-215ENST00000488235 PCP11498 1178 aaKnown RBP13.19□□□□□ -0.3
PCYT1A-215ENST00000488235 CALML3P27482 149 aa13.19□□□□□ -0.3
PCYT1A-215ENST00000488235 ALDH5A1P51649 535 aaPredicted RBP13.19□□□□□ -0.3
PCYT1A-215ENST00000488235 RPS6P62753 249 aaKnown RBP13.19□□□□□ -0.3
PCYT1A-215ENST00000488235 FSCN1Q16658 493 aaKnown RBP13.19□□□□□ -0.3
PCYT1A-215ENST00000488235 C16orf59Q7L2K0 433 aa13.19□□□□□ -0.3
PCYT1A-215ENST00000488235 FAM126BQ8IXS8 530 aa13.19□□□□□ -0.3
PCYT1A-215ENST00000488235 ENAHQ8N8S7 591 aaPredicted RBP13.19□□□□□ -0.3
PCYT1A-215ENST00000488235 PCSK9Q8NBP7 692 aaKnown RBP13.19□□□□□ -0.3
PCYT1A-215ENST00000488235 TBC1D5Q92609 795 aa13.19□□□□□ -0.3
PCYT1A-215ENST00000488235 ESR2Q92731 530 aa13.19□□□□□ -0.3
PCYT1A-215ENST00000488235 VTI1AQ96AJ9 217 aa13.19□□□□□ -0.3
PCYT1A-215ENST00000488235 DSCC1Q9BVC3 393 aa13.19□□□□□ -0.3
PCYT1A-215ENST00000488235 TTYH1Q9H313 450 aaPredicted RBP13.19□□□□□ -0.3
PCYT1A-215ENST00000488235 RNF41Q9H4P4 317 aaPredicted RBP13.19□□□□□ -0.3
PCYT1A-215ENST00000488235 ZSWIM5Q9P217 1185 aa13.19□□□□□ -0.3
PCYT1A-215ENST00000488235 TAF6LQ9Y6J9 622 aa13.19□□□□□ -0.3
PCYT1A-215ENST00000488235 UMODL1Q5DID0 1318 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms