RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 DYNC1LI2O43237 492 aaPredicted RBP18.07■□□□□ 0.48
TRIM50-203ENST00000488217 ICAM1P05362 532 aa18.07■□□□□ 0.48
TRIM50-203ENST00000488217 SLC16A2P36021 539 aa18.07■□□□□ 0.48
TRIM50-203ENST00000488217 CCDC96Q2M329 555 aa18.07■□□□□ 0.48
TRIM50-203ENST00000488217 MFSD5Q6N075 450 aa18.07■□□□□ 0.48
TRIM50-203ENST00000488217 LNPKQ9C0E8 428 aa18.07■□□□□ 0.48
TRIM50-203ENST00000488217 AP5M1Q9H0R1 490 aa18.07■□□□□ 0.48
TRIM50-203ENST00000488217 RWDD1Q9H446 243 aaPredicted RBP18.07■□□□□ 0.48
TRIM50-203ENST00000488217 TBX21Q9UL17 535 aa18.07■□□□□ 0.48
TRIM50-203ENST00000488217 GNEQ9Y223 722 aaKnown RBP18.07■□□□□ 0.48
TRIM50-203ENST00000488217 GREB1LQ9C091 1923 aaPredicted RBP18.07■□□□□ 0.48
TRIM50-203ENST00000488217 ZNFX1Q9P2E3 1918 aaKnown RBP18.06■□□□□ 0.48
TRIM50-203ENST00000488217 A0A0U1RQG5 324 aaPredicted RBP18.06■□□□□ 0.48
TRIM50-203ENST00000488217 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.06■□□□□ 0.48
TRIM50-203ENST00000488217 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.06■□□□□ 0.48
TRIM50-203ENST00000488217 BEX3Q00994 111 aa18.06■□□□□ 0.48
TRIM50-203ENST00000488217 NMIQ13287 307 aaPredicted RBP18.06■□□□□ 0.48
TRIM50-203ENST00000488217 B4GALNT3Q6L9W6 998 aa18.06■□□□□ 0.48
TRIM50-203ENST00000488217 TAPT1Q6NXT6 567 aa18.06■□□□□ 0.48
TRIM50-203ENST00000488217 NSMFQ6X4W1 530 aa18.06■□□□□ 0.48
TRIM50-203ENST00000488217 MFSD6Q6ZSS7 791 aa18.06■□□□□ 0.48
TRIM50-203ENST00000488217 RILPL2Q969X0 211 aa18.06■□□□□ 0.48
TRIM50-203ENST00000488217 RANBP17Q9H2T7 1088 aaKnown RBP18.06■□□□□ 0.48
TRIM50-203ENST00000488217 GPCPD1Q9NPB8 672 aa18.06■□□□□ 0.48
TRIM50-203ENST00000488217 PDGFCQ9NRA1 345 aa18.06■□□□□ 0.48
TRIM50-203ENST00000488217 Q9Y3F1 56 aa18.06■□□□□ 0.48
TRIM50-203ENST00000488217 MYH7P12883 1935 aa18.06■□□□□ 0.48
TRIM50-203ENST00000488217 MYH8P13535 1937 aa18.06■□□□□ 0.48
TRIM50-203ENST00000488217 CABYRO75952 493 aa18.05■□□□□ 0.48
TRIM50-203ENST00000488217 PCP11498 1178 aaKnown RBP18.05■□□□□ 0.48
TRIM50-203ENST00000488217 SMPD1P17405 629 aa18.05■□□□□ 0.48
TRIM50-203ENST00000488217 BAATQ14032 418 aaPredicted RBP18.05■□□□□ 0.48
TRIM50-203ENST00000488217 SYDE2Q5VT97 1194 aa18.05■□□□□ 0.48
TRIM50-203ENST00000488217 C16orf59Q7L2K0 433 aa18.05■□□□□ 0.48
TRIM50-203ENST00000488217 EEPD1Q7L9B9 569 aa18.05■□□□□ 0.48
TRIM50-203ENST00000488217 RASGRP2Q7LDG7 609 aa18.05■□□□□ 0.48
TRIM50-203ENST00000488217 PURBQ96QR8 312 aaKnown RBP18.05■□□□□ 0.48
TRIM50-203ENST00000488217 TTYH1Q9H313 450 aaPredicted RBP18.05■□□□□ 0.48
TRIM50-203ENST00000488217 DDX49Q9Y6V7 483 aaKnown RBP18.05■□□□□ 0.48
TRIM50-203ENST00000488217 ASTN1O14525 1302 aa18.04■□□□□ 0.48
TRIM50-203ENST00000488217 TLR3O15455 904 aaKnown RBP18.04■□□□□ 0.48
TRIM50-203ENST00000488217 ZEB2O60315 1214 aa18.04■□□□□ 0.48
TRIM50-203ENST00000488217 SDSP20132 328 aa18.04■□□□□ 0.48
TRIM50-203ENST00000488217 HAND2P61296 217 aa18.04■□□□□ 0.48
TRIM50-203ENST00000488217 FSCN1Q16658 493 aaKnown RBP18.04■□□□□ 0.48
TRIM50-203ENST00000488217 AKNAD1Q5T1N1 836 aa18.04■□□□□ 0.48
TRIM50-203ENST00000488217 CXCL17Q6UXB2 119 aa18.04■□□□□ 0.48
TRIM50-203ENST00000488217 KIAA1211Q6ZU35 1233 aa18.04■□□□□ 0.48
TRIM50-203ENST00000488217 ZNF589Q86UQ0 364 aaPredicted RBP18.04■□□□□ 0.48
TRIM50-203ENST00000488217 FAM126BQ8IXS8 530 aa18.04■□□□□ 0.48
TRIM50-203ENST00000488217 SMC5Q8IY18 1101 aa18.04■□□□□ 0.48
TRIM50-203ENST00000488217 SLC43A3Q8NBI5 491 aa18.04■□□□□ 0.48
TRIM50-203ENST00000488217 MORC4Q8TE76 937 aa18.04■□□□□ 0.48
TRIM50-203ENST00000488217 ADD3Q9UEY8 706 aaKnown RBP18.04■□□□□ 0.48
TRIM50-203ENST00000488217 PNMA2Q9UL42 364 aa18.04■□□□□ 0.48
TRIM50-203ENST00000488217 PARP14Q460N5 1801 aa18.04■□□□□ 0.48
TRIM50-203ENST00000488217 COL11A1P12107 1806 aaPredicted RBP18.03■□□□□ 0.48
TRIM50-203ENST00000488217 FRMPD3Q5JV73 1810 aa18.03■□□□□ 0.48
TRIM50-203ENST00000488217 CD4P01730 458 aa18.03■□□□□ 0.48
TRIM50-203ENST00000488217 MFAP1P55081 439 aaKnown RBP18.03■□□□□ 0.48
TRIM50-203ENST00000488217 TLK2Q86UE8 772 aa18.03■□□□□ 0.48
TRIM50-203ENST00000488217 TMEM199Q8N511 208 aa18.03■□□□□ 0.48
TRIM50-203ENST00000488217 SEZ6LQ9BYH1 1024 aa18.03■□□□□ 0.48
TRIM50-203ENST00000488217 VTA1Q9NP79 307 aa18.03■□□□□ 0.48
TRIM50-203ENST00000488217 FRMPD2Q68DX3 1309 aaPredicted RBP18.02■□□□□ 0.48
TRIM50-203ENST00000488217 CCDC171Q6TFL3 1326 aa18.02■□□□□ 0.48
TRIM50-203ENST00000488217 ZNF213O14771 459 aa18.02■□□□□ 0.48
TRIM50-203ENST00000488217 IGHDP01880 384 aa18.02■□□□□ 0.48
TRIM50-203ENST00000488217 PDHBP11177 359 aa18.02■□□□□ 0.48
TRIM50-203ENST00000488217 PPIGQ13427 754 aaKnown RBP eCLIP18.02■□□□□ 0.48
TRIM50-203ENST00000488217 ITGA7Q13683 1181 aa18.02■□□□□ 0.48
TRIM50-203ENST00000488217 TMEM63BQ5T3F8 832 aa18.02■□□□□ 0.48
TRIM50-203ENST00000488217 CHD1LQ86WJ1 897 aa18.02■□□□□ 0.48
TRIM50-203ENST00000488217 PLEKHM2Q8IWE5 1019 aa18.02■□□□□ 0.48
TRIM50-203ENST00000488217 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.02■□□□□ 0.48
TRIM50-203ENST00000488217 OSBPL3Q9H4L5 887 aa18.02■□□□□ 0.48
TRIM50-203ENST00000488217 RNF41Q9H4P4 317 aaPredicted RBP18.02■□□□□ 0.48
TRIM50-203ENST00000488217 GRIN2DO15399 1336 aa18.01■□□□□ 0.47
TRIM50-203ENST00000488217 ZMYM6O95789 1325 aa18.01■□□□□ 0.47
TRIM50-203ENST00000488217 TMEM265A0A087WTH1 108 aa18.01■□□□□ 0.47
TRIM50-203ENST00000488217 LOC102724159A0A0B4J2E5 919 aa18.01■□□□□ 0.47
TRIM50-203ENST00000488217 CSF2RAP15509 400 aa18.01■□□□□ 0.47
TRIM50-203ENST00000488217 NUCB1Q02818 461 aa18.01■□□□□ 0.47
TRIM50-203ENST00000488217 PWP2Q15269 919 aaKnown RBP18.01■□□□□ 0.47
TRIM50-203ENST00000488217 TMEM240Q5SV17 173 aa18.01■□□□□ 0.47
TRIM50-203ENST00000488217 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.01■□□□□ 0.47
TRIM50-203ENST00000488217 FBXO16Q8IX29 292 aaPredicted RBP18.01■□□□□ 0.47
TRIM50-203ENST00000488217 CLEC4DQ8WXI8 215 aa18.01■□□□□ 0.47
TRIM50-203ENST00000488217 PPP1R12CQ9BZL4 782 aa18.01■□□□□ 0.47
TRIM50-203ENST00000488217 PTPDC1A2A3K4 754 aa18■□□□□ 0.47
TRIM50-203ENST00000488217 NFIBO00712 420 aa18■□□□□ 0.47
TRIM50-203ENST00000488217 SNHG28P0DPA3 235 aa18■□□□□ 0.47
TRIM50-203ENST00000488217 PTGS1P23219 599 aa18■□□□□ 0.47
TRIM50-203ENST00000488217 CYP2C18P33260 490 aa18■□□□□ 0.47
TRIM50-203ENST00000488217 ZNF543Q08ER8 600 aa18■□□□□ 0.47
TRIM50-203ENST00000488217 DUSP28Q4G0W2 176 aa18■□□□□ 0.47
TRIM50-203ENST00000488217 RNF207Q6ZRF8 634 aa18■□□□□ 0.47
TRIM50-203ENST00000488217 DGKHQ86XP1 1220 aa18■□□□□ 0.47
TRIM50-203ENST00000488217 MYLIPQ8WY64 445 aa18■□□□□ 0.47
TRIM50-203ENST00000488217 ESR2Q92731 530 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms