RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 ZNF543Q08ER8 600 aa22.74■■□□□ 1.23
CD55-209ENST00000488171 SH3RF1Q7Z6J0 888 aa22.74■■□□□ 1.23
CD55-209ENST00000488171 PRDM5Q9NQX1 630 aaPredicted RBP22.74■■□□□ 1.23
CD55-209ENST00000488171 TRIM43BA6NCK2 446 aa22.73■■□□□ 1.23
CD55-209ENST00000488171 CST5P28325 142 aaPredicted RBP22.73■■□□□ 1.23
CD55-209ENST00000488171 KCNA10Q16322 511 aa22.73■■□□□ 1.23
CD55-209ENST00000488171 TTC22Q5TAA0 569 aa22.73■■□□□ 1.23
CD55-209ENST00000488171 TRIM43Q96BQ3 446 aaPredicted RBP22.73■■□□□ 1.23
CD55-209ENST00000488171 UPF3AQ9H1J1 476 aaKnown RBP22.73■■□□□ 1.23
CD55-209ENST00000488171 DDX49Q9Y6V7 483 aaKnown RBP22.73■■□□□ 1.23
CD55-209ENST00000488171 MOXD2PA6NHM9 499 aa22.72■■□□□ 1.23
CD55-209ENST00000488171 ASB14A6NK59 587 aa22.72■■□□□ 1.23
CD55-209ENST00000488171 GJA9P57773 515 aa22.72■■□□□ 1.23
CD55-209ENST00000488171 NSMFQ6X4W1 530 aa22.72■■□□□ 1.23
CD55-209ENST00000488171 DGKHQ86XP1 1220 aa22.72■■□□□ 1.23
CD55-209ENST00000488171 PURBQ96QR8 312 aaKnown RBP22.72■■□□□ 1.23
CD55-209ENST00000488171 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.71■■□□□ 1.23
CD55-209ENST00000488171 B4E1Z4 1266 aa22.71■■□□□ 1.23
CD55-209ENST00000488171 KDM4AO75164 1064 aa22.71■■□□□ 1.23
CD55-209ENST00000488171 C6orf222P0C671 652 aaPredicted RBP22.71■■□□□ 1.23
CD55-209ENST00000488171 NT5C2P49902 561 aa22.71■■□□□ 1.23
CD55-209ENST00000488171 GPR153Q6NV75 609 aa22.71■■□□□ 1.23
CD55-209ENST00000488171 NFIBO00712 420 aa22.7■■□□□ 1.22
CD55-209ENST00000488171 CTAGE5O15320 804 aa22.7■■□□□ 1.22
CD55-209ENST00000488171 IMMTQ16891 758 aaKnown RBP22.7■■□□□ 1.22
CD55-209ENST00000488171 NUP133Q8WUM0 1156 aa22.7■■□□□ 1.22
CD55-209ENST00000488171 BADQ92934 168 aa22.7■■□□□ 1.22
CD55-209ENST00000488171 STARD7Q9NQZ5 370 aa22.7■■□□□ 1.22
CD55-209ENST00000488171 PQBP1O60828 265 aaKnown RBP22.69■■□□□ 1.22
CD55-209ENST00000488171 CLTBP09497 229 aa22.69■■□□□ 1.22
CD55-209ENST00000488171 NKX3-2P78367 333 aa22.69■■□□□ 1.22
CD55-209ENST00000488171 BAATQ14032 418 aaPredicted RBP22.69■■□□□ 1.22
CD55-209ENST00000488171 IQCA1Q86XH1 822 aa22.69■■□□□ 1.22
CD55-209ENST00000488171 CLEC4DQ8WXI8 215 aa22.69■■□□□ 1.22
CD55-209ENST00000488171 ANKS1AQ92625 1134 aa22.69■■□□□ 1.22
CD55-209ENST00000488171 ZSWIM5Q9P217 1185 aa22.69■■□□□ 1.22
CD55-209ENST00000488171 CTNNA3Q9UI47 895 aa22.69■■□□□ 1.22
CD55-209ENST00000488171 ASGR1P07306 291 aa22.68■■□□□ 1.22
CD55-209ENST00000488171 GOLGA8HP0CJ92 632 aa22.68■■□□□ 1.22
CD55-209ENST00000488171 ITGB8P26012 769 aa22.68■■□□□ 1.22
CD55-209ENST00000488171 TNFAIP2Q03169 654 aa22.68■■□□□ 1.22
CD55-209ENST00000488171 CCDC178Q5BJE1 867 aa22.68■■□□□ 1.22
CD55-209ENST00000488171 ANKRD33Q7Z3H0 272 aa22.68■■□□□ 1.22
CD55-209ENST00000488171 PCSK9Q8NBP7 692 aaKnown RBP22.68■■□□□ 1.22
CD55-209ENST00000488171 PNMA1Q8ND90 353 aa22.68■■□□□ 1.22
CD55-209ENST00000488171 MORC4Q8TE76 937 aa22.68■■□□□ 1.22
CD55-209ENST00000488171 ZSCAN10Q96SZ4 725 aaPredicted RBP22.68■■□□□ 1.22
CD55-209ENST00000488171 SPC25Q9HBM1 224 aa22.68■■□□□ 1.22
CD55-209ENST00000488171 GNEQ9Y223 722 aaKnown RBP22.68■■□□□ 1.22
CD55-209ENST00000488171 ELP1O95163 1332 aa22.67■■□□□ 1.22
CD55-209ENST00000488171 WDR19Q8NEZ3 1342 aa22.67■■□□□ 1.22
CD55-209ENST00000488171 GNASQ5JWF2 1037 aa22.67■■□□□ 1.22
CD55-209ENST00000488171 GPATCH4Q5T3I0 446 aaKnown RBP22.67■■□□□ 1.22
CD55-209ENST00000488171 TAPT1Q6NXT6 567 aa22.67■■□□□ 1.22
CD55-209ENST00000488171 ENAHQ8N8S7 591 aaPredicted RBP22.67■■□□□ 1.22
CD55-209ENST00000488171 TOX2Q96NM4 488 aa22.67■■□□□ 1.22
CD55-209ENST00000488171 CPVLQ9H3G5 476 aa22.67■■□□□ 1.22
CD55-209ENST00000488171 PDGFCQ9NRA1 345 aa22.67■■□□□ 1.22
CD55-209ENST00000488171 KIAA0355O15063 1070 aa22.66■■□□□ 1.22
CD55-209ENST00000488171 PTGS1P23219 599 aa22.66■■□□□ 1.22
CD55-209ENST00000488171 FAAP100Q0VG06 881 aa22.66■■□□□ 1.22
CD55-209ENST00000488171 EEPD1Q7L9B9 569 aa22.66■■□□□ 1.22
CD55-209ENST00000488171 FBXO16Q8IX29 292 aaPredicted RBP22.66■■□□□ 1.22
CD55-209ENST00000488171 GLT1D1Q96MS3 346 aa22.66■■□□□ 1.22
CD55-209ENST00000488171 PNMA2Q9UL42 364 aa22.66■■□□□ 1.22
CD55-209ENST00000488171 RAD50Q92878 1312 aa22.66■■□□□ 1.22
CD55-209ENST00000488171 PTPDC1A2A3K4 754 aa22.65■■□□□ 1.22
CD55-209ENST00000488171 SMPD1P17405 629 aa22.65■■□□□ 1.22
CD55-209ENST00000488171 CDK7P50613 346 aa22.65■■□□□ 1.22
CD55-209ENST00000488171 ALDH5A1P51649 535 aaPredicted RBP22.65■■□□□ 1.22
CD55-209ENST00000488171 BEX3Q00994 111 aa22.65■■□□□ 1.22
CD55-209ENST00000488171 SHHQ15465 462 aa22.65■■□□□ 1.22
CD55-209ENST00000488171 C9orf50Q5SZB4 431 aa22.65■■□□□ 1.22
CD55-209ENST00000488171 TMEM63BQ5T3F8 832 aa22.65■■□□□ 1.22
CD55-209ENST00000488171 SLC30A10Q6XR72 485 aa22.65■■□□□ 1.22
CD55-209ENST00000488171 NOL8Q76FK4 1167 aaKnown RBP22.65■■□□□ 1.22
CD55-209ENST00000488171 Q7L0L9 218 aa22.65■■□□□ 1.22
CD55-209ENST00000488171 KRT23Q9C075 422 aa22.65■■□□□ 1.22
CD55-209ENST00000488171 UBA5Q9GZZ9 404 aa22.65■■□□□ 1.22
CD55-209ENST00000488171 KAT14Q9H8E8 782 aa22.65■■□□□ 1.22
CD55-209ENST00000488171 TNKSO95271 1327 aa22.65■■□□□ 1.22
CD55-209ENST00000488171 IQSEC1Q6DN90 963 aa22.64■■□□□ 1.22
CD55-209ENST00000488171 TLK2Q86UE8 772 aa22.64■■□□□ 1.22
CD55-209ENST00000488171 DEFB123Q8N688 67 aa22.64■■□□□ 1.22
CD55-209ENST00000488171 CNNM2Q9H8M5 875 aa22.64■■□□□ 1.22
CD55-209ENST00000488171 VTA1Q9NP79 307 aa22.64■■□□□ 1.22
CD55-209ENST00000488171 TMEM39AQ9NV64 488 aa22.64■■□□□ 1.22
CD55-209ENST00000488171 ADD3Q9UEY8 706 aaKnown RBP22.64■■□□□ 1.22
CD55-209ENST00000488171 DCDC2CA8MYV0 355 aa22.63■■□□□ 1.21
CD55-209ENST00000488171 CHMLP26374 656 aa22.63■■□□□ 1.21
CD55-209ENST00000488171 RNF207Q6ZRF8 634 aa22.63■■□□□ 1.21
CD55-209ENST00000488171 LOC102724159A0A0B4J2E5 919 aa22.63■■□□□ 1.21
CD55-209ENST00000488171 A0A0U1RQG5 324 aaPredicted RBP22.63■■□□□ 1.21
CD55-209ENST00000488171 RAG1P15918 1043 aa22.63■■□□□ 1.21
CD55-209ENST00000488171 CALML3P27482 149 aa22.63■■□□□ 1.21
CD55-209ENST00000488171 RPS6P62753 249 aaKnown RBP22.63■■□□□ 1.21
CD55-209ENST00000488171 PWP2Q15269 919 aaKnown RBP22.63■■□□□ 1.21
CD55-209ENST00000488171 MROH7Q68CQ1 1323 aa22.62■■□□□ 1.21
CD55-209ENST00000488171 ARVCFO00192 962 aa22.62■■□□□ 1.21
CD55-209ENST00000488171 DYNC1LI2O43237 492 aaPredicted RBP22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms