RNA–Protein interactions for RNA: ENST00000488053.1

TNFSF4-203, Transcript of TNF superfamily member 4, humanhuman

TSL 3

Gene TNFSF4, Length 520 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-203ENST00000488053 GNA15P30679 374 aa8.12□□□□□ -1.11
TNFSF4-203ENST00000488053 HUNKP57058 714 aa8.12□□□□□ -1.11
TNFSF4-203ENST00000488053 GNAI1P63096 354 aa8.12□□□□□ -1.11
TNFSF4-203ENST00000488053 PTPN12Q05209 780 aaKnown RBP8.12□□□□□ -1.11
TNFSF4-203ENST00000488053 KRT26Q7Z3Y9 468 aa8.12□□□□□ -1.11
TNFSF4-203ENST00000488053 FBXO11Q86XK2 927 aa8.12□□□□□ -1.11
TNFSF4-203ENST00000488053 GLIS3Q8NEA6 775 aa8.12□□□□□ -1.11
TNFSF4-203ENST00000488053 EYA3Q99504 573 aa8.12□□□□□ -1.11
TNFSF4-203ENST00000488053 BCL11AQ9H165 835 aa8.12□□□□□ -1.11
TNFSF4-203ENST00000488053 PRKRIP1Q9H875 184 aaPredicted RBP8.12□□□□□ -1.11
TNFSF4-203ENST00000488053 LINC01387J3KSC0 135 aa8.11□□□□□ -1.11
TNFSF4-203ENST00000488053 EIF4EBP3O60516 100 aaPredicted RBP8.11□□□□□ -1.11
TNFSF4-203ENST00000488053 MAP2K2P36507 400 aa8.11□□□□□ -1.11
TNFSF4-203ENST00000488053 IKBKEQ14164 716 aa8.11□□□□□ -1.11
TNFSF4-203ENST00000488053 SPRED3Q2MJR0 410 aa8.11□□□□□ -1.11
TNFSF4-203ENST00000488053 KIF4BQ2VIQ3 1234 aa8.11□□□□□ -1.11
TNFSF4-203ENST00000488053 CCDC152Q4G0S7 254 aa8.11□□□□□ -1.11
TNFSF4-203ENST00000488053 NXPE4Q6UWF7 544 aa8.11□□□□□ -1.11
TNFSF4-203ENST00000488053 VN1R5Q7Z5H4 357 aa8.11□□□□□ -1.11
TNFSF4-203ENST00000488053 ZBTB38Q8NAP3 1195 aaPredicted RBP8.11□□□□□ -1.11
TNFSF4-203ENST00000488053 DPF2Q92785 391 aa8.11□□□□□ -1.11
TNFSF4-203ENST00000488053 DCPSQ96C86 337 aaKnown RBP8.11□□□□□ -1.11
TNFSF4-203ENST00000488053 ZC3H12CQ9C0D7 883 aaKnown RBP8.11□□□□□ -1.11
TNFSF4-203ENST00000488053 CLEC4MQ9H2X3 399 aaPredicted RBP8.11□□□□□ -1.11
TNFSF4-203ENST00000488053 IFT57Q9NWB7 429 aa8.11□□□□□ -1.11
TNFSF4-203ENST00000488053 CWC25Q9NXE8 425 aaPredicted RBP8.11□□□□□ -1.11
TNFSF4-203ENST00000488053 PODXL2Q9NZ53 605 aa8.11□□□□□ -1.11
TNFSF4-203ENST00000488053 MYH3P11055 1940 aa8.11□□□□□ -1.11
TNFSF4-203ENST00000488053 WTIPA6NIX2 430 aaPredicted RBP8.1□□□□□ -1.11
TNFSF4-203ENST00000488053 FAM229AH3BQW9 127 aa8.1□□□□□ -1.11
TNFSF4-203ENST00000488053 FSCN2O14926 492 aa8.1□□□□□ -1.11
TNFSF4-203ENST00000488053 PDE8AO60658 829 aa8.1□□□□□ -1.11
TNFSF4-203ENST00000488053 PCCAP05165 728 aaPredicted RBP8.1□□□□□ -1.11
TNFSF4-203ENST00000488053 RPS12P25398 132 aaKnown RBP8.1□□□□□ -1.11
TNFSF4-203ENST00000488053 CDC25BP30305 580 aa8.1□□□□□ -1.11
TNFSF4-203ENST00000488053 GSTT1P30711 240 aa8.1□□□□□ -1.11
TNFSF4-203ENST00000488053 ARL4DP49703 201 aa8.1□□□□□ -1.11
TNFSF4-203ENST00000488053 SETDB1Q15047 1291 aa8.1□□□□□ -1.11
TNFSF4-203ENST00000488053 RPS26P11Q5JNZ5 115 aaPredicted RBP8.1□□□□□ -1.11
TNFSF4-203ENST00000488053 TSPYL6Q8N831 410 aa8.1□□□□□ -1.11
TNFSF4-203ENST00000488053 KLHL23Q8NBE8 558 aa8.1□□□□□ -1.11
TNFSF4-203ENST00000488053 GIPC2Q8TF65 315 aa8.1□□□□□ -1.11
TNFSF4-203ENST00000488053 TSR2Q969E8 191 aaKnown RBP8.1□□□□□ -1.11
TNFSF4-203ENST00000488053 C12orf49Q9H741 205 aa8.1□□□□□ -1.11
TNFSF4-203ENST00000488053 GBA2Q9HCG7 927 aaPredicted RBP8.1□□□□□ -1.11
TNFSF4-203ENST00000488053 GGA3Q9NZ52 723 aa8.1□□□□□ -1.11
TNFSF4-203ENST00000488053 SCAF8Q9UPN6 1271 aaKnown RBP8.1□□□□□ -1.11
TNFSF4-203ENST00000488053 MAP3K2Q9Y2U5 619 aa8.1□□□□□ -1.11
TNFSF4-203ENST00000488053 PSME4Q14997 1843 aa8.1□□□□□ -1.11
TNFSF4-203ENST00000488053 AKAP11Q9UKA4 1901 aa8.09□□□□□ -1.11
TNFSF4-203ENST00000488053 DEAF1O75398 565 aaPredicted RBP8.09□□□□□ -1.11
TNFSF4-203ENST00000488053 DDX58O95786 925 aaKnown RBP8.09□□□□□ -1.11
TNFSF4-203ENST00000488053 VIL1P09327 827 aaKnown RBP8.09□□□□□ -1.11
TNFSF4-203ENST00000488053 FCGRTP55899 365 aa8.09□□□□□ -1.11
TNFSF4-203ENST00000488053 CALD1Q05682 793 aaKnown RBP8.09□□□□□ -1.11
TNFSF4-203ENST00000488053 PCDH1Q08174 1060 aa8.09□□□□□ -1.11
TNFSF4-203ENST00000488053 CCDC184Q52MB2 194 aa8.09□□□□□ -1.11
TNFSF4-203ENST00000488053 TXNDC11Q6PKC3 985 aa8.09□□□□□ -1.11
TNFSF4-203ENST00000488053 DTHD1Q6ZMT9 781 aa8.09□□□□□ -1.11
TNFSF4-203ENST00000488053 ANKRD18AQ8IVF6 992 aa8.09□□□□□ -1.11
TNFSF4-203ENST00000488053 C2orf69Q8N8R5 385 aa8.09□□□□□ -1.11
TNFSF4-203ENST00000488053 CCDC191Q8NCU4 936 aa8.09□□□□□ -1.11
TNFSF4-203ENST00000488053 HHIPL1Q96JK4 782 aa8.09□□□□□ -1.11
TNFSF4-203ENST00000488053 NACC1Q96RE7 527 aa8.09□□□□□ -1.11
TNFSF4-203ENST00000488053 METTL22Q9BUU2 404 aaPredicted RBP8.09□□□□□ -1.11
TNFSF4-203ENST00000488053 OSBPL7Q9BZF2 842 aa8.09□□□□□ -1.11
TNFSF4-203ENST00000488053 MCOLN1Q9GZU1 580 aa8.09□□□□□ -1.11
TNFSF4-203ENST00000488053 ZNF576Q9H609 170 aa8.09□□□□□ -1.11
TNFSF4-203ENST00000488053 OSGEPQ9NPF4 335 aa8.09□□□□□ -1.11
TNFSF4-203ENST00000488053 FAM8A1Q9UBU6 413 aa8.09□□□□□ -1.11
TNFSF4-203ENST00000488053 PARP2Q9UGN5 583 aa8.09□□□□□ -1.11
TNFSF4-203ENST00000488053 PI4KAP2A4QPH2 592 aa8.08□□□□□ -1.12
TNFSF4-203ENST00000488053 FAM155AB1AL88 458 aaPredicted RBP8.08□□□□□ -1.12
TNFSF4-203ENST00000488053 IGKV5-2P06315 115 aa8.08□□□□□ -1.12
TNFSF4-203ENST00000488053 ESRRAP11474 423 aaPredicted RBP8.08□□□□□ -1.12
TNFSF4-203ENST00000488053 HSP90B1P14625 803 aaKnown RBP8.08□□□□□ -1.12
TNFSF4-203ENST00000488053 EIF4BP23588 611 aaKnown RBP8.08□□□□□ -1.12
TNFSF4-203ENST00000488053 ZNF157P51786 506 aaPredicted RBP8.08□□□□□ -1.12
TNFSF4-203ENST00000488053 CTSWP56202 376 aa8.08□□□□□ -1.12
TNFSF4-203ENST00000488053 KIF23Q02241 960 aaPredicted RBP8.08□□□□□ -1.12
TNFSF4-203ENST00000488053 C19orf57Q0VDD7 668 aa8.08□□□□□ -1.12
TNFSF4-203ENST00000488053 PSMD2Q13200 908 aa8.08□□□□□ -1.12
TNFSF4-203ENST00000488053 NOGQ13253 232 aa8.08□□□□□ -1.12
TNFSF4-203ENST00000488053 CWF19L2Q2TBE0 894 aaKnown RBP8.08□□□□□ -1.12
TNFSF4-203ENST00000488053 ANGEL2Q5VTE6 544 aaKnown RBP8.08□□□□□ -1.12
TNFSF4-203ENST00000488053 CCDC30Q5VVM6 783 aa8.08□□□□□ -1.12
TNFSF4-203ENST00000488053 RGMBQ6NW40 437 aa8.08□□□□□ -1.12
TNFSF4-203ENST00000488053 PI4KAP1Q8N8J0 262 aa8.08□□□□□ -1.12
TNFSF4-203ENST00000488053 CDCA5Q96FF9 252 aa8.08□□□□□ -1.12
TNFSF4-203ENST00000488053 MXD3Q9BW11 206 aa8.08□□□□□ -1.12
TNFSF4-203ENST00000488053 SOX17Q9H6I2 414 aaPredicted RBP8.08□□□□□ -1.12
TNFSF4-203ENST00000488053 GREM2Q9H772 168 aa8.08□□□□□ -1.12
TNFSF4-203ENST00000488053 XDHP47989 1333 aa8.07□□□□□ -1.12
TNFSF4-203ENST00000488053 DLL1O00548 723 aa8.07□□□□□ -1.12
TNFSF4-203ENST00000488053 CA12O43570 354 aa8.07□□□□□ -1.12
TNFSF4-203ENST00000488053 GSK3AP49840 483 aa8.07□□□□□ -1.12
TNFSF4-203ENST00000488053 DAB2P98082 770 aa8.07□□□□□ -1.12
TNFSF4-203ENST00000488053 PRAMEF18Q5VWM3 479 aa8.07□□□□□ -1.12
TNFSF4-203ENST00000488053 KSR2Q6VAB6 950 aa8.07□□□□□ -1.12
TNFSF4-203ENST00000488053 G2E3Q7L622 706 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms