RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 SEPT7Q16181 437 aaKnown RBP4.43□□□□□ -1.7
GPNMB-212ENST00000487890 NTRK3Q16288 839 aa4.43□□□□□ -1.7
GPNMB-212ENST00000487890 WWC2Q6AWC2 1192 aa4.43□□□□□ -1.7
GPNMB-212ENST00000487890 PKN3Q6P5Z2 889 aa4.43□□□□□ -1.7
GPNMB-212ENST00000487890 KIAA1211Q6ZU35 1233 aa4.43□□□□□ -1.7
GPNMB-212ENST00000487890 DYMQ7RTS9 669 aa4.43□□□□□ -1.7
GPNMB-212ENST00000487890 ANKLE2Q86XL3 938 aa4.43□□□□□ -1.7
GPNMB-212ENST00000487890 WDR75Q8IWA0 830 aaKnown RBP4.43□□□□□ -1.7
GPNMB-212ENST00000487890 TRIM59Q8IWR1 403 aa4.43□□□□□ -1.7
GPNMB-212ENST00000487890 C7orf61Q8IZ16 206 aa4.43□□□□□ -1.7
GPNMB-212ENST00000487890 AHI1Q8N157 1196 aa4.43□□□□□ -1.7
GPNMB-212ENST00000487890 THEMISQ8N1K5 641 aaPredicted RBP4.43□□□□□ -1.7
GPNMB-212ENST00000487890 PPM1KQ8N3J5 372 aa4.43□□□□□ -1.7
GPNMB-212ENST00000487890 ARHGEF39Q8N4T4 335 aa4.43□□□□□ -1.7
GPNMB-212ENST00000487890 GSTCDQ8NEC7 633 aa4.43□□□□□ -1.7
GPNMB-212ENST00000487890 FOXQ1Q9C009 403 aa4.43□□□□□ -1.7
GPNMB-212ENST00000487890 MKRN2Q9H000 416 aaKnown RBP4.43□□□□□ -1.7
GPNMB-212ENST00000487890 GBP3Q9H0R5 595 aa4.43□□□□□ -1.7
GPNMB-212ENST00000487890 CCDC8Q9H0W5 538 aaPredicted RBP4.43□□□□□ -1.7
GPNMB-212ENST00000487890 GP6Q9HCN6 339 aa4.43□□□□□ -1.7
GPNMB-212ENST00000487890 GEMIN8Q9NWZ8 242 aaKnown RBP4.43□□□□□ -1.7
GPNMB-212ENST00000487890 WHRNQ9P202 907 aa4.43□□□□□ -1.7
GPNMB-212ENST00000487890 NXF1Q9UBU9 619 aaKnown RBP4.43□□□□□ -1.7
GPNMB-212ENST00000487890 AP4E1Q9UPM8 1137 aa4.43□□□□□ -1.7
GPNMB-212ENST00000487890 NEURL4Q96JN8 1562 aa4.43□□□□□ -1.7
GPNMB-212ENST00000487890 UBR1Q8IWV7 1749 aa4.43□□□□□ -1.7
GPNMB-212ENST00000487890 TCOF1Q13428 1488 aaKnown RBP4.43□□□□□ -1.7
GPNMB-212ENST00000487890 DISP3Q9P2K9 1392 aa4.42□□□□□ -1.7
GPNMB-212ENST00000487890 PRDM15P57071 1507 aaPredicted RBP4.42□□□□□ -1.7
GPNMB-212ENST00000487890 SHTN1A0MZ66 631 aa4.42□□□□□ -1.7
GPNMB-212ENST00000487890 KRBA1A5PL33 1030 aa4.42□□□□□ -1.7
GPNMB-212ENST00000487890 KCNH1O95259 989 aa4.42□□□□□ -1.7
GPNMB-212ENST00000487890 RASGRP1O95267 797 aa4.42□□□□□ -1.7
GPNMB-212ENST00000487890 ADH5P11766 374 aa4.42□□□□□ -1.7
GPNMB-212ENST00000487890 CPEP16870 476 aa4.42□□□□□ -1.7
GPNMB-212ENST00000487890 EPHB1P54762 984 aa4.42□□□□□ -1.7
GPNMB-212ENST00000487890 ZNF445P59923 1031 aa4.42□□□□□ -1.7
GPNMB-212ENST00000487890 KRT76Q01546 638 aa4.42□□□□□ -1.7
GPNMB-212ENST00000487890 MTMR1Q13613 665 aa4.42□□□□□ -1.7
GPNMB-212ENST00000487890 NUTM2GQ5VZR2 741 aa4.42□□□□□ -1.7
GPNMB-212ENST00000487890 GTF2IRD2BQ6EKJ0 949 aa4.42□□□□□ -1.7
GPNMB-212ENST00000487890 SPATA31D1Q6ZQQ2 1576 aa4.42□□□□□ -1.7
GPNMB-212ENST00000487890 GTF2IRD2Q86UP8 949 aa4.42□□□□□ -1.7
GPNMB-212ENST00000487890 KCT2Q8NC54 265 aa4.42□□□□□ -1.7
GPNMB-212ENST00000487890 SMG8Q8ND04 991 aaKnown RBP4.42□□□□□ -1.7
GPNMB-212ENST00000487890 DNAJB8Q8NHS0 232 aa4.42□□□□□ -1.7
GPNMB-212ENST00000487890 WDR66Q8TBY9 1149 aa4.42□□□□□ -1.7
GPNMB-212ENST00000487890 PMM1Q92871 262 aa4.42□□□□□ -1.7
GPNMB-212ENST00000487890 RCC1LQ96I51 464 aaKnown RBP4.42□□□□□ -1.7
GPNMB-212ENST00000487890 ERBINQ96RT1 1412 aa4.42□□□□□ -1.7
GPNMB-212ENST00000487890 PSMD1Q99460 953 aa4.42□□□□□ -1.7
GPNMB-212ENST00000487890 TRIM8Q9BZR9 551 aa4.42□□□□□ -1.7
GPNMB-212ENST00000487890 GSX1Q9H4S2 264 aaPredicted RBP4.42□□□□□ -1.7
GPNMB-212ENST00000487890 SSU72Q9NP77 194 aaKnown RBP4.42□□□□□ -1.7
GPNMB-212ENST00000487890 SLC5A4Q9NY91 659 aa4.42□□□□□ -1.7
GPNMB-212ENST00000487890 CEP131Q9UPN4 1083 aa4.42□□□□□ -1.7
GPNMB-212ENST00000487890 DEPDC5O75140 1603 aa4.42□□□□□ -1.7
GPNMB-212ENST00000487890 NPHP4O75161 1426 aaPredicted RBP4.41□□□□□ -1.7
GPNMB-212ENST00000487890 H3BM21 787 aa4.41□□□□□ -1.7
GPNMB-212ENST00000487890 NEMP1O14524 444 aa4.41□□□□□ -1.7
GPNMB-212ENST00000487890 LCE2BO14633 110 aa4.41□□□□□ -1.7
GPNMB-212ENST00000487890 GPR39O43194 453 aa4.41□□□□□ -1.7
GPNMB-212ENST00000487890 OIP5O43482 229 aa4.41□□□□□ -1.7
GPNMB-212ENST00000487890 OPA1O60313 960 aa4.41□□□□□ -1.7
GPNMB-212ENST00000487890 KPNA6O60684 536 aa4.41□□□□□ -1.7
GPNMB-212ENST00000487890 ADAMTS2O95450 1211 aa4.41□□□□□ -1.7
GPNMB-212ENST00000487890 NPTXRO95502 500 aa4.41□□□□□ -1.7
GPNMB-212ENST00000487890 ASLP04424 464 aa4.41□□□□□ -1.7
GPNMB-212ENST00000487890 JMJD7P0C870 316 aa4.41□□□□□ -1.7
GPNMB-212ENST00000487890 ASPAP45381 313 aa4.41□□□□□ -1.7
GPNMB-212ENST00000487890 ID4P47928 161 aa4.41□□□□□ -1.7
GPNMB-212ENST00000487890 RAB27AP51159 221 aa4.41□□□□□ -1.7
GPNMB-212ENST00000487890 GFRA1P56159 465 aa4.41□□□□□ -1.7
GPNMB-212ENST00000487890 GABREP78334 506 aa4.41□□□□□ -1.7
GPNMB-212ENST00000487890 CYP4F3Q08477 520 aa4.41□□□□□ -1.7
GPNMB-212ENST00000487890 STAT4Q14765 748 aa4.41□□□□□ -1.7
GPNMB-212ENST00000487890 PPP2R5AQ15172 486 aa4.41□□□□□ -1.7
GPNMB-212ENST00000487890 DHCR24Q15392 516 aa4.41□□□□□ -1.7
GPNMB-212ENST00000487890 MAP9Q49MG5 647 aa4.41□□□□□ -1.7
GPNMB-212ENST00000487890 TRAPPC3LQ5T215 181 aa4.41□□□□□ -1.7
GPNMB-212ENST00000487890 ARMCX6Q7L4S7 300 aa4.41□□□□□ -1.7
GPNMB-212ENST00000487890 FBXO11Q86XK2 927 aa4.41□□□□□ -1.7
GPNMB-212ENST00000487890 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.41□□□□□ -1.7
GPNMB-212ENST00000487890 SMYD4Q8IYR2 804 aaPredicted RBP4.41□□□□□ -1.7
GPNMB-212ENST00000487890 C12orf50Q8NA57 414 aaPredicted RBP4.41□□□□□ -1.7
GPNMB-212ENST00000487890 KREMEN1Q96MU8 473 aa4.41□□□□□ -1.7
GPNMB-212ENST00000487890 SUGCTQ9HAC7 445 aa4.41□□□□□ -1.7
GPNMB-212ENST00000487890 PIDD1Q9HB75 910 aa4.41□□□□□ -1.7
GPNMB-212ENST00000487890 FAM105AQ9NUU6 356 aa4.41□□□□□ -1.7
GPNMB-212ENST00000487890 CGGBP1Q9UFW8 167 aaPredicted RBP4.41□□□□□ -1.7
GPNMB-212ENST00000487890 FBXL21Q9UKT6 434 aa4.41□□□□□ -1.7
GPNMB-212ENST00000487890 TRAF6Q9Y4K3 522 aa4.41□□□□□ -1.7
GPNMB-212ENST00000487890 ACTL7BQ9Y614 415 aa4.41□□□□□ -1.7
GPNMB-212ENST00000487890 PIK3C2BO00750 1634 aa4.41□□□□□ -1.7
GPNMB-212ENST00000487890 IQSEC2Q5JU85 1478 aa4.41□□□□□ -1.7
GPNMB-212ENST00000487890 SCAF11Q99590 1463 aaKnown RBP4.41□□□□□ -1.7
GPNMB-212ENST00000487890 STRCP1A6NGW2 1772 aa4.4□□□□□ -1.7
GPNMB-212ENST00000487890 A0A087WZG4 1122 aa4.4□□□□□ -1.71
GPNMB-212ENST00000487890 TCRBV16S1A1N1A0A5B0 115 aa4.4□□□□□ -1.71
GPNMB-212ENST00000487890 AKAP10O43572 662 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms