RNA–Protein interactions for RNA: ENST00000487689.1

UBR3-211, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 3

Gene UBR3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-211ENST00000487689 TAB3Q8N5C8 712 aaPredicted RBP6.57□□□□□ -1.36
UBR3-211ENST00000487689 TP53I13Q8NBR0 393 aaPredicted RBP6.57□□□□□ -1.36
UBR3-211ENST00000487689 PWWP2AQ96N64 755 aa6.57□□□□□ -1.36
UBR3-211ENST00000487689 IMPACTQ9P2X3 320 aa6.57□□□□□ -1.36
UBR3-211ENST00000487689 DBR1Q9UK59 544 aaKnown RBP6.57□□□□□ -1.36
UBR3-211ENST00000487689 ACSL6Q9UKU0 697 aa6.57□□□□□ -1.36
UBR3-211ENST00000487689 SLC12A7Q9Y666 1083 aa6.57□□□□□ -1.36
UBR3-211ENST00000487689 TP53P04637 393 aaPredicted RBP6.56□□□□□ -1.36
UBR3-211ENST00000487689 CTSKP43235 329 aa6.56□□□□□ -1.36
UBR3-211ENST00000487689 POU4F1Q01851 419 aa6.56□□□□□ -1.36
UBR3-211ENST00000487689 COL9A2Q14055 689 aaPredicted RBP6.56□□□□□ -1.36
UBR3-211ENST00000487689 TDRD10Q5VZ19 366 aaKnown RBP6.56□□□□□ -1.36
UBR3-211ENST00000487689 ZC3H14Q6PJT7 736 aaKnown RBP6.56□□□□□ -1.36
UBR3-211ENST00000487689 SPATA32Q96LK8 384 aa6.56□□□□□ -1.36
UBR3-211ENST00000487689 GUCY2CP25092 1073 aa6.55□□□□□ -1.36
UBR3-211ENST00000487689 TARBP2Q15633 366 aaKnown RBP6.55□□□□□ -1.36
UBR3-211ENST00000487689 BICRALQ6AI39 1079 aa6.55□□□□□ -1.36
UBR3-211ENST00000487689 IGDCC3Q8IVU1 814 aa6.55□□□□□ -1.36
UBR3-211ENST00000487689 FIBCD1Q8N539 461 aa6.55□□□□□ -1.36
UBR3-211ENST00000487689 BACH2Q9BYV9 841 aa6.55□□□□□ -1.36
UBR3-211ENST00000487689 GBP3Q9H0R5 595 aa6.55□□□□□ -1.36
UBR3-211ENST00000487689 FAM86C1Q9NVL1 165 aa6.55□□□□□ -1.36
UBR3-211ENST00000487689 KLHL14Q9P2G3 628 aa6.55□□□□□ -1.36
UBR3-211ENST00000487689 PALD1Q9ULE6 856 aa6.55□□□□□ -1.36
UBR3-211ENST00000487689 FHOD1Q9Y613 1164 aa6.55□□□□□ -1.36
UBR3-211ENST00000487689 C9IYK1 514 aa6.54□□□□□ -1.36
UBR3-211ENST00000487689 K7ESM1 405 aa6.54□□□□□ -1.36
UBR3-211ENST00000487689 ZXDAP98168 799 aa6.54□□□□□ -1.36
UBR3-211ENST00000487689 ANKRD39Q53RE8 183 aa6.54□□□□□ -1.36
UBR3-211ENST00000487689 CABP7Q86V35 215 aa6.54□□□□□ -1.36
UBR3-211ENST00000487689 LDHDQ86WU2 507 aa6.54□□□□□ -1.36
UBR3-211ENST00000487689 BRF1Q92994 677 aa6.54□□□□□ -1.36
UBR3-211ENST00000487689 JMJD8Q96S16 334 aa6.54□□□□□ -1.36
UBR3-211ENST00000487689 SLC12A9Q9BXP2 914 aa6.54□□□□□ -1.36
UBR3-211ENST00000487689 GP6Q9HCN6 339 aa6.54□□□□□ -1.36
UBR3-211ENST00000487689 TNFRSF12AQ9NP84 129 aa6.54□□□□□ -1.36
UBR3-211ENST00000487689 FAN1Q9Y2M0 1017 aa6.54□□□□□ -1.36
UBR3-211ENST00000487689 H0Y8X5 98 aa6.53□□□□□ -1.36
UBR3-211ENST00000487689 BUB1BO60566 1050 aaPredicted RBP6.53□□□□□ -1.36
UBR3-211ENST00000487689 CD3EP07766 207 aa6.53□□□□□ -1.36
UBR3-211ENST00000487689 ACRP10323 421 aa6.53□□□□□ -1.36
UBR3-211ENST00000487689 CD247P20963 164 aa6.53□□□□□ -1.36
UBR3-211ENST00000487689 MAPKAPK2P49137 400 aa6.53□□□□□ -1.36
UBR3-211ENST00000487689 ZNF827Q17R98 1081 aa6.53□□□□□ -1.36
UBR3-211ENST00000487689 ZNF394Q53GI3 561 aa6.53□□□□□ -1.36
UBR3-211ENST00000487689 DCAF15Q66K64 600 aa6.53□□□□□ -1.36
UBR3-211ENST00000487689 UNC5AQ6ZN44 842 aa6.53□□□□□ -1.36
UBR3-211ENST00000487689 ZNF654Q8IZM8 581 aa6.53□□□□□ -1.36
UBR3-211ENST00000487689 NOL6Q9H6R4 1146 aaKnown RBP6.53□□□□□ -1.36
UBR3-211ENST00000487689 PPT2Q9UMR5 302 aa6.53□□□□□ -1.36
UBR3-211ENST00000487689 DIS3Q9Y2L1 958 aaKnown RBP6.53□□□□□ -1.36
UBR3-211ENST00000487689 PCDHGB7Q9Y5F8 929 aa6.53□□□□□ -1.36
UBR3-211ENST00000487689 CYBBP04839 570 aa6.52□□□□□ -1.37
UBR3-211ENST00000487689 TNFRSF1AP19438 455 aa6.52□□□□□ -1.37
UBR3-211ENST00000487689 KCNC1P48547 511 aa6.52□□□□□ -1.37
UBR3-211ENST00000487689 ZNF445P59923 1031 aa6.52□□□□□ -1.37
UBR3-211ENST00000487689 FANCCQ00597 558 aa6.52□□□□□ -1.37
UBR3-211ENST00000487689 CBX2Q14781 532 aaPredicted RBP6.52□□□□□ -1.37
UBR3-211ENST00000487689 KIR3DS1Q14943 382 aa6.52□□□□□ -1.37
UBR3-211ENST00000487689 RTP2Q5QGT7 225 aa6.52□□□□□ -1.37
UBR3-211ENST00000487689 AXDND1Q5T1B0 1012 aaPredicted RBP6.52□□□□□ -1.37
UBR3-211ENST00000487689 PAQR3Q6TCH7 311 aa6.52□□□□□ -1.37
UBR3-211ENST00000487689 RPTNQ6XPR3 784 aa6.52□□□□□ -1.37
UBR3-211ENST00000487689 ADAT2Q7Z6V5 191 aaKnown RBP6.52□□□□□ -1.37
UBR3-211ENST00000487689 RBBP8NLQ8NC74 664 aaPredicted RBP6.52□□□□□ -1.37
UBR3-211ENST00000487689 ZDHHC15Q96MV8 337 aa6.52□□□□□ -1.37
UBR3-211ENST00000487689 PDLIM7Q9NR12 457 aa6.52□□□□□ -1.37
UBR3-211ENST00000487689 CNOT11Q9UKZ1 510 aaKnown RBP6.52□□□□□ -1.37
UBR3-211ENST00000487689 A0A087WZG4 1122 aa6.51□□□□□ -1.37
UBR3-211ENST00000487689 SCAMP3O14828 347 aaKnown RBP6.51□□□□□ -1.37
UBR3-211ENST00000487689 SLURP1P55000 103 aa6.51□□□□□ -1.37
UBR3-211ENST00000487689 CORO7P57737 925 aa6.51□□□□□ -1.37
UBR3-211ENST00000487689 GNPTABQ3T906 1256 aa6.51□□□□□ -1.37
UBR3-211ENST00000487689 PLEKHN1Q494U1 663 aaPredicted RBP6.51□□□□□ -1.37
UBR3-211ENST00000487689 UBXN11Q5T124 520 aa6.51□□□□□ -1.37
UBR3-211ENST00000487689 ZFYVE27Q5T4F4 411 aa6.51□□□□□ -1.37
UBR3-211ENST00000487689 HEATR6Q6AI08 1181 aaKnown RBP6.51□□□□□ -1.37
UBR3-211ENST00000487689 SRRTQ9BXP5 876 aaKnown RBP6.51□□□□□ -1.37
UBR3-211ENST00000487689 PHAXQ9H814 394 aaKnown RBP6.51□□□□□ -1.37
UBR3-211ENST00000487689 WHRNQ9P202 907 aa6.51□□□□□ -1.37
UBR3-211ENST00000487689 FFAR3O14843 346 aa6.5□□□□□ -1.37
UBR3-211ENST00000487689 FGF10O15520 208 aaPredicted RBP6.5□□□□□ -1.37
UBR3-211ENST00000487689 PPM1BO75688 479 aa6.5□□□□□ -1.37
UBR3-211ENST00000487689 L1CAMP32004 1257 aa6.5□□□□□ -1.37
UBR3-211ENST00000487689 NCKAP1LP55160 1127 aa6.5□□□□□ -1.37
UBR3-211ENST00000487689 EIF6P56537 245 aaKnown RBP6.5□□□□□ -1.37
UBR3-211ENST00000487689 ZNF200P98182 395 aaPredicted RBP6.5□□□□□ -1.37
UBR3-211ENST00000487689 PPP2R5DQ14738 602 aa6.5□□□□□ -1.37
UBR3-211ENST00000487689 EEF1DP3Q658K8 133 aa6.5□□□□□ -1.37
UBR3-211ENST00000487689 OR6P1Q8NGX9 317 aa6.5□□□□□ -1.37
UBR3-211ENST00000487689 CPLX3Q8WVH0 158 aa6.5□□□□□ -1.37
UBR3-211ENST00000487689 PTCHD1Q96NR3 888 aa6.5□□□□□ -1.37
UBR3-211ENST00000487689 SRRDQ9UH36 339 aa6.5□□□□□ -1.37
UBR3-211ENST00000487689 ZNF214Q9UL59 606 aaPredicted RBP6.5□□□□□ -1.37
UBR3-211ENST00000487689 PCDHA5Q9Y5H7 936 aa6.5□□□□□ -1.37
UBR3-211ENST00000487689 F8W031 263 aaPredicted RBP6.49□□□□□ -1.37
UBR3-211ENST00000487689 OVOL3O00110 214 aa6.49□□□□□ -1.37
UBR3-211ENST00000487689 SHOXO15266 292 aa6.49□□□□□ -1.37
UBR3-211ENST00000487689 SRGAP3O43295 1099 aa6.49□□□□□ -1.37
UBR3-211ENST00000487689 MAGEA10P43363 369 aaPredicted RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms