RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 ADAMTS5Q9UNA0 930 aa12.44□□□□□ -0.42
TOP3B-216ENST00000487485 A0A0G2JMZ2 1700 aa12.44□□□□□ -0.42
TOP3B-216ENST00000487485 MYH6P13533 1939 aa12.44□□□□□ -0.42
TOP3B-216ENST00000487485 PALM3A6NDB9 673 aaPredicted RBP12.43□□□□□ -0.42
TOP3B-216ENST00000487485 KLRF2D3W0D1 207 aa12.43□□□□□ -0.42
TOP3B-216ENST00000487485 VWA5AO00534 786 aa12.43□□□□□ -0.42
TOP3B-216ENST00000487485 ZBTB43O43298 467 aa12.43□□□□□ -0.42
TOP3B-216ENST00000487485 MAPK4P31152 587 aa12.43□□□□□ -0.42
TOP3B-216ENST00000487485 AK2P54819 239 aa12.43□□□□□ -0.42
TOP3B-216ENST00000487485 MORN1Q5T089 497 aa12.43□□□□□ -0.42
TOP3B-216ENST00000487485 GPR142Q7Z601 462 aa12.43□□□□□ -0.42
TOP3B-216ENST00000487485 CCDC144CPQ8IYA2 1237 aa12.43□□□□□ -0.42
TOP3B-216ENST00000487485 TRMT44Q8IYL2 757 aaKnown RBP12.43□□□□□ -0.42
TOP3B-216ENST00000487485 FANCBQ8NB91 859 aa12.43□□□□□ -0.42
TOP3B-216ENST00000487485 CTCFLQ8NI51 663 aaPredicted RBP12.43□□□□□ -0.42
TOP3B-216ENST00000487485 LARP6Q9BRS8 491 aaKnown RBP12.43□□□□□ -0.42
TOP3B-216ENST00000487485 PAGR1Q9BTK6 254 aa12.43□□□□□ -0.42
TOP3B-216ENST00000487485 CPVLQ9H3G5 476 aa12.43□□□□□ -0.42
TOP3B-216ENST00000487485 BTBD7Q9P203 1132 aa12.43□□□□□ -0.42
TOP3B-216ENST00000487485 PRR12Q9ULL5 1215 aa12.43□□□□□ -0.42
TOP3B-216ENST00000487485 RABGAP1Q9Y3P9 1069 aa12.43□□□□□ -0.42
TOP3B-216ENST00000487485 NCOR1O75376 2440 aa12.42□□□□□ -0.42
TOP3B-216ENST00000487485 ZBED4O75132 1171 aa12.42□□□□□ -0.42
TOP3B-216ENST00000487485 CNMDO75829 334 aa12.42□□□□□ -0.42
TOP3B-216ENST00000487485 FDX1P10109 184 aa12.42□□□□□ -0.42
TOP3B-216ENST00000487485 KIF5BP33176 963 aa12.42□□□□□ -0.42
TOP3B-216ENST00000487485 RGS2P41220 211 aa12.42□□□□□ -0.42
TOP3B-216ENST00000487485 EVCP57679 992 aa12.42□□□□□ -0.42
TOP3B-216ENST00000487485 ERVK-9P63128 1117 aa12.42□□□□□ -0.42
TOP3B-216ENST00000487485 ERVK-24P63145 666 aa12.42□□□□□ -0.42
TOP3B-216ENST00000487485 RABEP1Q15276 862 aa12.42□□□□□ -0.42
TOP3B-216ENST00000487485 ANKRD1Q15327 319 aa12.42□□□□□ -0.42
TOP3B-216ENST00000487485 SYDE2Q5VT97 1194 aa12.42□□□□□ -0.42
TOP3B-216ENST00000487485 PLEKHH3Q7Z736 793 aa12.42□□□□□ -0.42
TOP3B-216ENST00000487485 MICU3Q86XE3 530 aa12.42□□□□□ -0.42
TOP3B-216ENST00000487485 MB21D1Q8N884 522 aa12.42□□□□□ -0.42
TOP3B-216ENST00000487485 SENP6Q9GZR1 1112 aaPredicted RBP12.42□□□□□ -0.42
TOP3B-216ENST00000487485 CTDP1Q9Y5B0 961 aaPredicted RBP12.42□□□□□ -0.42
TOP3B-216ENST00000487485 GOLGA8AA7E2F4 631 aa12.41□□□□□ -0.42
TOP3B-216ENST00000487485 GOLGA8BA8MQT2 603 aa12.41□□□□□ -0.42
TOP3B-216ENST00000487485 PDIA3P30101 505 aaKnown RBP12.41□□□□□ -0.42
TOP3B-216ENST00000487485 GNAQP50148 359 aa12.41□□□□□ -0.42
TOP3B-216ENST00000487485 RCAN1P53805 252 aa12.41□□□□□ -0.42
TOP3B-216ENST00000487485 ATN1P54259 1190 aaPredicted RBP12.41□□□□□ -0.42
TOP3B-216ENST00000487485 SNAP25P60880 206 aa12.41□□□□□ -0.42
TOP3B-216ENST00000487485 PLS1Q14651 629 aa12.41□□□□□ -0.42
TOP3B-216ENST00000487485 TMEM132BQ14DG7 1078 aa12.41□□□□□ -0.42
TOP3B-216ENST00000487485 CCAR1Q8IX12 1150 aaKnown RBP12.41□□□□□ -0.42
TOP3B-216ENST00000487485 ADGRF4Q8IZF3 695 aa12.41□□□□□ -0.42
TOP3B-216ENST00000487485 REPS2Q8NFH8 660 aa12.41□□□□□ -0.42
TOP3B-216ENST00000487485 ZNF274Q96GC6 653 aaPredicted RBP12.41□□□□□ -0.42
TOP3B-216ENST00000487485 LBHD1Q9BQE6 289 aaPredicted RBP12.41□□□□□ -0.42
TOP3B-216ENST00000487485 SLC38A10Q9HBR0 1119 aa12.41□□□□□ -0.42
TOP3B-216ENST00000487485 VAT1LQ9HCJ6 419 aa12.41□□□□□ -0.42
TOP3B-216ENST00000487485 SPTBN5Q9NRC6 3674 aaKnown RBP12.41□□□□□ -0.42
TOP3B-216ENST00000487485 FLRT1Q9NZU1 646 aa12.41□□□□□ -0.42
TOP3B-216ENST00000487485 DHX16O60231 1041 aaKnown RBP12.4□□□□□ -0.42
TOP3B-216ENST00000487485 METAP2P50579 478 aaKnown RBP eCLIP12.4□□□□□ -0.42
TOP3B-216ENST00000487485 MAP2K5Q13163 448 aa12.4□□□□□ -0.42
TOP3B-216ENST00000487485 PPP2R5BQ15173 497 aa12.4□□□□□ -0.42
TOP3B-216ENST00000487485 RTN1Q16799 776 aa12.4□□□□□ -0.42
TOP3B-216ENST00000487485 CCDC174Q6PII3 467 aa12.4□□□□□ -0.42
TOP3B-216ENST00000487485 NOL8Q76FK4 1167 aaKnown RBP12.4□□□□□ -0.42
TOP3B-216ENST00000487485 CPXCR1Q8N123 301 aa12.4□□□□□ -0.42
TOP3B-216ENST00000487485 CMTR1Q8N1G2 835 aaKnown RBP12.4□□□□□ -0.42
TOP3B-216ENST00000487485 CDX2Q99626 313 aaPredicted RBP12.4□□□□□ -0.42
TOP3B-216ENST00000487485 APBA2Q99767 749 aa12.4□□□□□ -0.42
TOP3B-216ENST00000487485 LZTS2Q9BRK4 669 aa12.4□□□□□ -0.42
TOP3B-216ENST00000487485 RANBP17Q9H2T7 1088 aaKnown RBP12.4□□□□□ -0.42
TOP3B-216ENST00000487485 JMJD4Q9H9V9 463 aa12.4□□□□□ -0.42
TOP3B-216ENST00000487485 RBM28Q9NW13 759 aaKnown RBP12.4□□□□□ -0.42
TOP3B-216ENST00000487485 TPCN1Q9ULQ1 816 aa12.4□□□□□ -0.42
TOP3B-216ENST00000487485 BAZ2BQ9UIF8 2168 aaKnown RBP12.4□□□□□ -0.42
TOP3B-216ENST00000487485 SMCHD1A6NHR9 2005 aa12.4□□□□□ -0.42
TOP3B-216ENST00000487485 ZNFX1Q9P2E3 1918 aaKnown RBP12.39□□□□□ -0.43
TOP3B-216ENST00000487485 CYTH3O43739 400 aa12.39□□□□□ -0.43
TOP3B-216ENST00000487485 PLEKHA8P1O95397 391 aa12.39□□□□□ -0.43
TOP3B-216ENST00000487485 SMARCA1P28370 1054 aa12.39□□□□□ -0.43
TOP3B-216ENST00000487485 CDC27P30260 824 aa12.39□□□□□ -0.43
TOP3B-216ENST00000487485 ADD1P35611 737 aaKnown RBP12.39□□□□□ -0.43
TOP3B-216ENST00000487485 STAT3P40763 770 aa12.39□□□□□ -0.43
TOP3B-216ENST00000487485 SLC4A3P48751 1232 aa12.39□□□□□ -0.43
TOP3B-216ENST00000487485 CCT2P78371 535 aaKnown RBP12.39□□□□□ -0.43
TOP3B-216ENST00000487485 CCNA1P78396 465 aa12.39□□□□□ -0.43
TOP3B-216ENST00000487485 STK3Q13188 491 aa12.39□□□□□ -0.43
TOP3B-216ENST00000487485 SHHQ15465 462 aa12.39□□□□□ -0.43
TOP3B-216ENST00000487485 ZNF697Q5TEC3 545 aa12.39□□□□□ -0.43
TOP3B-216ENST00000487485 CCDC82Q8N4S0 544 aa12.39□□□□□ -0.43
TOP3B-216ENST00000487485 SRBD1Q8N5C6 995 aaKnown RBP12.39□□□□□ -0.43
TOP3B-216ENST00000487485 IL27Q8NEV9 243 aa12.39□□□□□ -0.43
TOP3B-216ENST00000487485 SPATC1LQ9H0A9 340 aa12.39□□□□□ -0.43
TOP3B-216ENST00000487485 SEMA6BQ9H3T3 888 aa12.39□□□□□ -0.43
TOP3B-216ENST00000487485 RIOX1Q9H6W3 641 aa12.39□□□□□ -0.43
TOP3B-216ENST00000487485 RAVER2Q9HCJ3 691 aaKnown RBP12.39□□□□□ -0.43
TOP3B-216ENST00000487485 FAM217BQ9NTX9 383 aaPredicted RBP12.39□□□□□ -0.43
TOP3B-216ENST00000487485 ZNF214Q9UL59 606 aaPredicted RBP12.39□□□□□ -0.43
TOP3B-216ENST00000487485 ZNF536O15090 1300 aa12.38□□□□□ -0.43
TOP3B-216ENST00000487485 CCDC196A0A1B0GTZ2 297 aa12.38□□□□□ -0.43
TOP3B-216ENST00000487485 ATP2A1O14983 1001 aa12.38□□□□□ -0.43
TOP3B-216ENST00000487485 ST18O60284 1047 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms