RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 MYH6P13533 1939 aa8.44□□□□□ -1.06
UBE4B-209ENST00000487244 TMEM232C9JQI7 657 aa8.44□□□□□ -1.06
UBE4B-209ENST00000487244 HMGCRP04035 888 aa8.44□□□□□ -1.06
UBE4B-209ENST00000487244 CYP21A2P08686 494 aa8.44□□□□□ -1.06
UBE4B-209ENST00000487244 BMP3P12645 472 aa8.44□□□□□ -1.06
UBE4B-209ENST00000487244 TAL1P17542 331 aaPredicted RBP8.44□□□□□ -1.06
UBE4B-209ENST00000487244 SLC1A4P43007 532 aa8.44□□□□□ -1.06
UBE4B-209ENST00000487244 SNAP25P60880 206 aa8.44□□□□□ -1.06
UBE4B-209ENST00000487244 MLLT1Q03111 559 aaPredicted RBP8.44□□□□□ -1.06
UBE4B-209ENST00000487244 COL9A3Q14050 684 aaPredicted RBP8.44□□□□□ -1.06
UBE4B-209ENST00000487244 GRB14Q14449 540 aa8.44□□□□□ -1.06
UBE4B-209ENST00000487244 IMMTQ16891 758 aaKnown RBP8.44□□□□□ -1.06
UBE4B-209ENST00000487244 BMP2KLQ5H9B9 411 aa8.44□□□□□ -1.06
UBE4B-209ENST00000487244 STOX1Q6ZVD7 989 aa8.44□□□□□ -1.06
UBE4B-209ENST00000487244 KCTD1Q719H9 257 aa8.44□□□□□ -1.06
UBE4B-209ENST00000487244 NPLOC4Q8TAT6 608 aa8.44□□□□□ -1.06
UBE4B-209ENST00000487244 ESR2Q92731 530 aa8.44□□□□□ -1.06
UBE4B-209ENST00000487244 KIFC2Q96AC6 838 aa8.44□□□□□ -1.06
UBE4B-209ENST00000487244 GMCL1Q96IK5 515 aa8.44□□□□□ -1.06
UBE4B-209ENST00000487244 APBA2Q99767 749 aa8.44□□□□□ -1.06
UBE4B-209ENST00000487244 ESYT1Q9BSJ8 1104 aa8.44□□□□□ -1.06
UBE4B-209ENST00000487244 RNF208Q9H0X6 261 aa8.44□□□□□ -1.06
UBE4B-209ENST00000487244 RNF41Q9H4P4 317 aaPredicted RBP8.44□□□□□ -1.06
UBE4B-209ENST00000487244 CWC22Q9HCG8 908 aaKnown RBP8.44□□□□□ -1.06
UBE4B-209ENST00000487244 TCP11L1Q9NUJ3 509 aa8.44□□□□□ -1.06
UBE4B-209ENST00000487244 RIPK3Q9Y572 518 aa8.44□□□□□ -1.06
UBE4B-209ENST00000487244 FRMPD2Q68DX3 1309 aaPredicted RBP8.44□□□□□ -1.06
UBE4B-209ENST00000487244 ALPK3Q96L96 1907 aa8.44□□□□□ -1.06
UBE4B-209ENST00000487244 BAZ2BQ9UIF8 2168 aaKnown RBP8.44□□□□□ -1.06
UBE4B-209ENST00000487244 SLC15A5A6NIM6 579 aa8.43□□□□□ -1.06
UBE4B-209ENST00000487244 COBLO75128 1261 aa8.43□□□□□ -1.06
UBE4B-209ENST00000487244 PCP11498 1178 aaKnown RBP8.43□□□□□ -1.06
UBE4B-209ENST00000487244 XRCC5P13010 732 aaKnown RBP8.43□□□□□ -1.06
UBE4B-209ENST00000487244 ZKSCAN1P17029 563 aaPredicted RBP8.43□□□□□ -1.06
UBE4B-209ENST00000487244 ADORA2AP29274 412 aa8.43□□□□□ -1.06
UBE4B-209ENST00000487244 SLC16A2P36021 539 aa8.43□□□□□ -1.06
UBE4B-209ENST00000487244 RGS2P41220 211 aa8.43□□□□□ -1.06
UBE4B-209ENST00000487244 CCDC96Q2M329 555 aa8.43□□□□□ -1.06
UBE4B-209ENST00000487244 SNRNP48Q6IEG0 339 aaKnown RBP8.43□□□□□ -1.06
UBE4B-209ENST00000487244 TTBK2Q6IQ55 1244 aa8.43□□□□□ -1.06
UBE4B-209ENST00000487244 CYB5R4Q7L1T6 521 aa8.43□□□□□ -1.06
UBE4B-209ENST00000487244 NCAPG2Q86XI2 1143 aa8.43□□□□□ -1.06
UBE4B-209ENST00000487244 CPXCR1Q8N123 301 aa8.43□□□□□ -1.06
UBE4B-209ENST00000487244 ENAHQ8N8S7 591 aaPredicted RBP8.43□□□□□ -1.06
UBE4B-209ENST00000487244 KRI1Q8N9T8 703 aaKnown RBP8.43□□□□□ -1.06
UBE4B-209ENST00000487244 PRPF38AQ8NAV1 312 aaKnown RBP8.43□□□□□ -1.06
UBE4B-209ENST00000487244 SHCBP1Q8NEM2 672 aa8.43□□□□□ -1.06
UBE4B-209ENST00000487244 LSG1Q9H089 658 aaKnown RBP8.43□□□□□ -1.06
UBE4B-209ENST00000487244 SLC38A10Q9HBR0 1119 aa8.43□□□□□ -1.06
UBE4B-209ENST00000487244 RAVER2Q9HCJ3 691 aaKnown RBP8.43□□□□□ -1.06
UBE4B-209ENST00000487244 ZSWIM5Q9P217 1185 aa8.43□□□□□ -1.06
UBE4B-209ENST00000487244 CTNNA3Q9UI47 895 aa8.43□□□□□ -1.06
UBE4B-209ENST00000487244 FEM1BQ9UK73 627 aa8.43□□□□□ -1.06
UBE4B-209ENST00000487244 RBM8AQ9Y5S9 174 aaKnown RBP8.43□□□□□ -1.06
UBE4B-209ENST00000487244 IVNS1ABPQ9Y6Y0 642 aa8.43□□□□□ -1.06
UBE4B-209ENST00000487244 DNAH12Q6ZR08 3092 aa8.43□□□□□ -1.06
UBE4B-209ENST00000487244 IGHA2P01877 340 aa8.42□□□□□ -1.06
UBE4B-209ENST00000487244 CENPBP07199 599 aaPredicted RBP8.42□□□□□ -1.06
UBE4B-209ENST00000487244 PGK2P07205 417 aa8.42□□□□□ -1.06
UBE4B-209ENST00000487244 PDHBP11177 359 aa8.42□□□□□ -1.06
UBE4B-209ENST00000487244 TOP1P11387 765 aaKnown RBP8.42□□□□□ -1.06
UBE4B-209ENST00000487244 STAT3P40763 770 aa8.42□□□□□ -1.06
UBE4B-209ENST00000487244 STAT2P52630 851 aa8.42□□□□□ -1.06
UBE4B-209ENST00000487244 UBXN2AP68543 259 aa8.42□□□□□ -1.06
UBE4B-209ENST00000487244 CACNB2Q08289 660 aaPredicted RBP8.42□□□□□ -1.06
UBE4B-209ENST00000487244 IKQ13123 557 aaPredicted RBP8.42□□□□□ -1.06
UBE4B-209ENST00000487244 MAP3K21Q5TCX8 1036 aa8.42□□□□□ -1.06
UBE4B-209ENST00000487244 RIOX2Q8IUF8 465 aa8.42□□□□□ -1.06
UBE4B-209ENST00000487244 DCAF4Q8WV16 495 aa8.42□□□□□ -1.06
UBE4B-209ENST00000487244 MAP4K1Q92918 833 aa8.42□□□□□ -1.06
UBE4B-209ENST00000487244 ZSCAN10Q96SZ4 725 aaPredicted RBP8.42□□□□□ -1.06
UBE4B-209ENST00000487244 TEX13BQ9BXU2 312 aa8.42□□□□□ -1.06
UBE4B-209ENST00000487244 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.42□□□□□ -1.06
UBE4B-209ENST00000487244 CPVLQ9H3G5 476 aa8.42□□□□□ -1.06
UBE4B-209ENST00000487244 MROH8Q9H579 483 aa8.42□□□□□ -1.06
UBE4B-209ENST00000487244 SENP2Q9HC62 589 aa8.42□□□□□ -1.06
UBE4B-209ENST00000487244 GPCPD1Q9NPB8 672 aa8.42□□□□□ -1.06
UBE4B-209ENST00000487244 PAK6Q9NQU5 681 aaPredicted RBP8.42□□□□□ -1.06
UBE4B-209ENST00000487244 HOMER2Q9NSB8 354 aa8.42□□□□□ -1.06
UBE4B-209ENST00000487244 PRR12Q9ULL5 1215 aa8.42□□□□□ -1.06
UBE4B-209ENST00000487244 ZNF536O15090 1300 aa8.42□□□□□ -1.06
UBE4B-209ENST00000487244 TNKSO95271 1327 aa8.42□□□□□ -1.06
UBE4B-209ENST00000487244 LRRC37A2A6NM11 1700 aa8.41□□□□□ -1.06
UBE4B-209ENST00000487244 E7EWF7 191 aa8.41□□□□□ -1.06
UBE4B-209ENST00000487244 SLC25A27O95847 323 aa8.41□□□□□ -1.06
UBE4B-209ENST00000487244 GJB1P08034 283 aa8.41□□□□□ -1.06
UBE4B-209ENST00000487244 HOXC6P09630 235 aa8.41□□□□□ -1.06
UBE4B-209ENST00000487244 GOLGA8HP0CJ92 632 aa8.41□□□□□ -1.06
UBE4B-209ENST00000487244 FCER1AP12319 257 aa8.41□□□□□ -1.06
UBE4B-209ENST00000487244 CCND3P30281 292 aaPredicted RBP8.41□□□□□ -1.06
UBE4B-209ENST00000487244 CYP2C19P33261 490 aa8.41□□□□□ -1.06
UBE4B-209ENST00000487244 GJA8P48165 433 aa8.41□□□□□ -1.06
UBE4B-209ENST00000487244 SEC23AQ15436 765 aa8.41□□□□□ -1.06
UBE4B-209ENST00000487244 CCDC174Q6PII3 467 aa8.41□□□□□ -1.06
UBE4B-209ENST00000487244 CHST3Q7LGC8 479 aa8.41□□□□□ -1.06
UBE4B-209ENST00000487244 FAM160B2Q86V87 743 aa8.41□□□□□ -1.06
UBE4B-209ENST00000487244 PNMA1Q8ND90 353 aa8.41□□□□□ -1.06
UBE4B-209ENST00000487244 TRPV1Q8NER1 839 aa8.41□□□□□ -1.06
UBE4B-209ENST00000487244 U2AF1L4Q8WU68 220 aaKnown RBP8.41□□□□□ -1.06
UBE4B-209ENST00000487244 AGBL1Q96MI9 1066 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms