RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 CABYRO75952 493 aa23.11■■□□□ 1.29
SMPDL3A-202ENST00000487215 SLC1A4P43007 532 aa23.11■■□□□ 1.29
SMPDL3A-202ENST00000487215 IKQ13123 557 aaPredicted RBP23.11■■□□□ 1.29
SMPDL3A-202ENST00000487215 TKFCQ3LXA3 575 aa23.11■■□□□ 1.29
SMPDL3A-202ENST00000487215 CHURC1Q8WUH1 139 aa23.11■■□□□ 1.29
SMPDL3A-202ENST00000487215 TRERF1Q96PN7 1200 aa23.11■■□□□ 1.29
SMPDL3A-202ENST00000487215 HIPK3Q9H422 1215 aa23.11■■□□□ 1.29
SMPDL3A-202ENST00000487215 DDX49Q9Y6V7 483 aaKnown RBP23.11■■□□□ 1.29
SMPDL3A-202ENST00000487215 GRIN2DO15399 1336 aa23.1■■□□□ 1.29
SMPDL3A-202ENST00000487215 ALAS1P13196 640 aa23.1■■□□□ 1.29
SMPDL3A-202ENST00000487215 SMPD1P17405 629 aa23.1■■□□□ 1.29
SMPDL3A-202ENST00000487215 MCCP23508 829 aa23.1■■□□□ 1.29
SMPDL3A-202ENST00000487215 PPARAQ07869 468 aa23.1■■□□□ 1.29
SMPDL3A-202ENST00000487215 ITGA7Q13683 1181 aa23.1■■□□□ 1.29
SMPDL3A-202ENST00000487215 ADGRE1Q14246 886 aa23.1■■□□□ 1.29
SMPDL3A-202ENST00000487215 RAB30Q15771 203 aa23.1■■□□□ 1.29
SMPDL3A-202ENST00000487215 FSCN1Q16658 493 aaKnown RBP23.1■■□□□ 1.29
SMPDL3A-202ENST00000487215 LRRFIP1Q32MZ4 808 aaKnown RBP23.1■■□□□ 1.29
SMPDL3A-202ENST00000487215 AKNAD1Q5T1N1 836 aa23.1■■□□□ 1.29
SMPDL3A-202ENST00000487215 NAPBQ9H115 298 aa23.1■■□□□ 1.29
SMPDL3A-202ENST00000487215 MSRAQ9UJ68 235 aa23.1■■□□□ 1.29
SMPDL3A-202ENST00000487215 TTC28Q96AY4 2481 aa23.1■■□□□ 1.29
SMPDL3A-202ENST00000487215 TNFRSF10AO00220 468 aa23.09■■□□□ 1.29
SMPDL3A-202ENST00000487215 SLC3A2P08195 630 aaKnown RBP23.09■■□□□ 1.29
SMPDL3A-202ENST00000487215 AP5M1Q9H0R1 490 aa23.09■■□□□ 1.29
SMPDL3A-202ENST00000487215 MTIF3Q9H2K0 278 aaKnown RBP23.09■■□□□ 1.29
SMPDL3A-202ENST00000487215 PDGFCQ9NRA1 345 aa23.09■■□□□ 1.29
SMPDL3A-202ENST00000487215 DYNC1LI2O43237 492 aaPredicted RBP23.08■■□□□ 1.29
SMPDL3A-202ENST00000487215 PLA2G6O60733 806 aa23.08■■□□□ 1.29
SMPDL3A-202ENST00000487215 FGBP02675 491 aa23.08■■□□□ 1.29
SMPDL3A-202ENST00000487215 SNAP25P60880 206 aa23.08■■□□□ 1.29
SMPDL3A-202ENST00000487215 MUM1L1Q5H9M0 696 aa23.08■■□□□ 1.29
SMPDL3A-202ENST00000487215 KCTD1Q719H9 257 aa23.08■■□□□ 1.29
SMPDL3A-202ENST00000487215 FBXO16Q8IX29 292 aaPredicted RBP23.08■■□□□ 1.29
SMPDL3A-202ENST00000487215 ATXN2LQ8WWM7 1075 aaKnown RBP23.08■■□□□ 1.29
SMPDL3A-202ENST00000487215 NKX2-4Q9H2Z4 354 aa23.08■■□□□ 1.29
SMPDL3A-202ENST00000487215 CYP39A1Q9NYL5 469 aa23.08■■□□□ 1.29
SMPDL3A-202ENST00000487215 THEGQ9P2T0 379 aa23.08■■□□□ 1.29
SMPDL3A-202ENST00000487215 CHD9Q3L8U1 2897 aa23.08■■□□□ 1.29
SMPDL3A-202ENST00000487215 CCL23P55773 120 aa23.07■■□□□ 1.28
SMPDL3A-202ENST00000487215 TMEM63BQ5T3F8 832 aa23.07■■□□□ 1.28
SMPDL3A-202ENST00000487215 TAPT1Q6NXT6 567 aa23.07■■□□□ 1.28
SMPDL3A-202ENST00000487215 EEPD1Q7L9B9 569 aa23.07■■□□□ 1.28
SMPDL3A-202ENST00000487215 RASGRP2Q7LDG7 609 aa23.07■■□□□ 1.28
SMPDL3A-202ENST00000487215 OTOP2Q7RTS6 562 aa23.07■■□□□ 1.28
SMPDL3A-202ENST00000487215 NOC4LQ9BVI4 516 aaKnown RBP23.07■■□□□ 1.28
SMPDL3A-202ENST00000487215 TRPV6Q9H1D0 765 aa23.07■■□□□ 1.28
SMPDL3A-202ENST00000487215 PRR12Q9ULL5 1215 aa23.07■■□□□ 1.28
SMPDL3A-202ENST00000487215 STX8Q9UNK0 236 aa23.07■■□□□ 1.28
SMPDL3A-202ENST00000487215 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.07■■□□□ 1.28
SMPDL3A-202ENST00000487215 YBX2Q9Y2T7 364 aaKnown RBP23.07■■□□□ 1.28
SMPDL3A-202ENST00000487215 TTC41PQ6P2S7 1318 aa23.07■■□□□ 1.28
SMPDL3A-202ENST00000487215 MUC3AQ02505 3323 aa23.06■■□□□ 1.28
SMPDL3A-202ENST00000487215 ZEB2O60315 1214 aa23.06■■□□□ 1.28
SMPDL3A-202ENST00000487215 B4GALT4O60513 344 aa23.06■■□□□ 1.28
SMPDL3A-202ENST00000487215 PSMC6P62333 389 aa23.06■■□□□ 1.28
SMPDL3A-202ENST00000487215 PPP4R3BQ5MIZ7 849 aa23.06■■□□□ 1.28
SMPDL3A-202ENST00000487215 ZMYM1Q5SVZ6 1142 aa23.06■■□□□ 1.28
SMPDL3A-202ENST00000487215 IQSEC1Q6DN90 963 aa23.06■■□□□ 1.28
SMPDL3A-202ENST00000487215 RCSD1Q6JBY9 416 aa23.06■■□□□ 1.28
SMPDL3A-202ENST00000487215 PI4K2BQ8TCG2 481 aa23.06■■□□□ 1.28
SMPDL3A-202ENST00000487215 FSD1Q9BTV5 496 aa23.06■■□□□ 1.28
SMPDL3A-202ENST00000487215 SEZ6LQ9BYH1 1024 aa23.06■■□□□ 1.28
SMPDL3A-202ENST00000487215 WNT8AQ9H1J5 351 aa23.06■■□□□ 1.28
SMPDL3A-202ENST00000487215 IL17RBQ9NRM6 502 aa23.06■■□□□ 1.28
SMPDL3A-202ENST00000487215 Q9Y3F1 56 aa23.06■■□□□ 1.28
SMPDL3A-202ENST00000487215 TSPY2A6NKD2 308 aa23.05■■□□□ 1.28
SMPDL3A-202ENST00000487215 NMT2O60551 498 aa23.05■■□□□ 1.28
SMPDL3A-202ENST00000487215 IGFBP4P22692 258 aa23.05■■□□□ 1.28
SMPDL3A-202ENST00000487215 ASB2Q96Q27 587 aa23.05■■□□□ 1.28
SMPDL3A-202ENST00000487215 PURBQ96QR8 312 aaKnown RBP23.05■■□□□ 1.28
SMPDL3A-202ENST00000487215 SLC28A3Q9HAS3 691 aa23.05■■□□□ 1.28
SMPDL3A-202ENST00000487215 FOXP2O15409 715 aa23.04■■□□□ 1.28
SMPDL3A-202ENST00000487215 CCDC85BQ15834 202 aaPredicted RBP23.04■■□□□ 1.28
SMPDL3A-202ENST00000487215 NSMFQ6X4W1 530 aa23.04■■□□□ 1.28
SMPDL3A-202ENST00000487215 VTA1Q9NP79 307 aa23.04■■□□□ 1.28
SMPDL3A-202ENST00000487215 INCENPQ9NQS7 918 aa23.04■■□□□ 1.28
SMPDL3A-202ENST00000487215 CCPG1Q9ULG6 757 aa23.04■■□□□ 1.28
SMPDL3A-202ENST00000487215 ERC2O15083 957 aa23.03■■□□□ 1.28
SMPDL3A-202ENST00000487215 CTDSPL2Q05D32 466 aa23.03■■□□□ 1.28
SMPDL3A-202ENST00000487215 OTUD7AQ8TE49 926 aaPredicted RBP23.03■■□□□ 1.28
SMPDL3A-202ENST00000487215 MORC4Q8TE76 937 aa23.03■■□□□ 1.28
SMPDL3A-202ENST00000487215 LCTP09848 1927 aa23.03■■□□□ 1.28
SMPDL3A-202ENST00000487215 GBF1Q92538 1859 aa23.02■■□□□ 1.28
SMPDL3A-202ENST00000487215 ICAM1P05362 532 aa23.02■■□□□ 1.28
SMPDL3A-202ENST00000487215 RABGGTBP53611 331 aa23.02■■□□□ 1.28
SMPDL3A-202ENST00000487215 KIAA1211Q6ZU35 1233 aa23.02■■□□□ 1.28
SMPDL3A-202ENST00000487215 VWCEQ96DN2 955 aa23.02■■□□□ 1.28
SMPDL3A-202ENST00000487215 SCLYQ96I15 445 aa23.02■■□□□ 1.28
SMPDL3A-202ENST00000487215 ALDH8A1Q9H2A2 487 aaPredicted RBP23.02■■□□□ 1.28
SMPDL3A-202ENST00000487215 MTMR7Q9Y216 660 aa23.02■■□□□ 1.28
SMPDL3A-202ENST00000487215 MRPS5P82675 430 aaKnown RBP23.01■■□□□ 1.27
SMPDL3A-202ENST00000487215 CCDC96Q2M329 555 aa23.01■■□□□ 1.27
SMPDL3A-202ENST00000487215 DUSP28Q4G0W2 176 aa23.01■■□□□ 1.27
SMPDL3A-202ENST00000487215 RPUSD2Q8IZ73 545 aaKnown RBP23.01■■□□□ 1.27
SMPDL3A-202ENST00000487215 ADAMTS19Q8TE59 1207 aa23.01■■□□□ 1.27
SMPDL3A-202ENST00000487215 RANBP17Q9H2T7 1088 aaKnown RBP23.01■■□□□ 1.27
SMPDL3A-202ENST00000487215 SLC4A7Q9Y6M7 1214 aa23.01■■□□□ 1.27
SMPDL3A-202ENST00000487215 MYOGP15173 224 aa23■■□□□ 1.27
SMPDL3A-202ENST00000487215 NOVP48745 357 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms