RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 CACNB1Q02641 598 aaPredicted RBP13.8□□□□□ -0.2
HSPG2-211ENST00000486901 SPAG1Q07617 926 aa13.8□□□□□ -0.2
HSPG2-211ENST00000486901 WDR93Q6P2C0 686 aa13.8□□□□□ -0.2
HSPG2-211ENST00000486901 TMTC3Q6ZXV5 915 aa13.8□□□□□ -0.2
HSPG2-211ENST00000486901 ADSSL1Q8N142 457 aa13.8□□□□□ -0.2
HSPG2-211ENST00000486901 OR2W6PQ8NHA6 318 aa13.8□□□□□ -0.2
HSPG2-211ENST00000486901 RBM12Q9NTZ6 932 aaKnown RBP13.8□□□□□ -0.2
HSPG2-211ENST00000486901 EXOC1Q9NV70 894 aa13.8□□□□□ -0.2
HSPG2-211ENST00000486901 BTG4Q9NY30 223 aa13.8□□□□□ -0.2
HSPG2-211ENST00000486901 PSMD14O00487 310 aa13.8□□□□□ -0.2
HSPG2-211ENST00000486901 PRPF3O43395 683 aaKnown RBP13.8□□□□□ -0.2
HSPG2-211ENST00000486901 PLCG1P19174 1290 aa13.8□□□□□ -0.2
HSPG2-211ENST00000486901 IGHMBP2P38935 993 aaKnown RBP13.8□□□□□ -0.2
HSPG2-211ENST00000486901 CARSP49589 748 aaKnown RBP13.8□□□□□ -0.2
HSPG2-211ENST00000486901 C1orf167Q5SNV9 1468 aa13.8□□□□□ -0.2
HSPG2-211ENST00000486901 GUCY2DQ02846 1103 aa13.8□□□□□ -0.2
HSPG2-211ENST00000486901 ALX1Q15699 326 aa13.8□□□□□ -0.2
HSPG2-211ENST00000486901 SPATA4Q8NEY3 305 aa13.8□□□□□ -0.2
HSPG2-211ENST00000486901 CCDC43Q96MW1 224 aaKnown RBP13.8□□□□□ -0.2
HSPG2-211ENST00000486901 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.8□□□□□ -0.2
HSPG2-211ENST00000486901 DISC1Q9NRI5 854 aa13.8□□□□□ -0.2
HSPG2-211ENST00000486901 FGFR2P21802 821 aa13.79□□□□□ -0.2
HSPG2-211ENST00000486901 PRDX5P30044 214 aa13.79□□□□□ -0.2
HSPG2-211ENST00000486901 KRT83P78385 493 aa13.79□□□□□ -0.2
HSPG2-211ENST00000486901 TTMPQ5BVD1 217 aa13.79□□□□□ -0.2
HSPG2-211ENST00000486901 MCM9Q9NXL9 1143 aa13.79□□□□□ -0.2
HSPG2-211ENST00000486901 NIP7Q9Y221 180 aaKnown RBP eCLIP13.79□□□□□ -0.2
HSPG2-211ENST00000486901 MYH13Q9UKX3 1938 aa13.79□□□□□ -0.2
HSPG2-211ENST00000486901 H7C1D1 291 aa13.79□□□□□ -0.2
HSPG2-211ENST00000486901 C3orf67Q6ZVT6 689 aa13.79□□□□□ -0.2
HSPG2-211ENST00000486901 EFCC1Q9HA90 598 aa13.79□□□□□ -0.2
HSPG2-211ENST00000486901 PPANQ9NQ55 473 aaKnown RBP13.79□□□□□ -0.2
HSPG2-211ENST00000486901 CNTNAP5Q8WYK1 1306 aa13.79□□□□□ -0.2
HSPG2-211ENST00000486901 TXKP42681 527 aa13.78□□□□□ -0.2
HSPG2-211ENST00000486901 TXNRD1Q16881 649 aa13.78□□□□□ -0.2
HSPG2-211ENST00000486901 MAATS1Q7Z4T9 603 aa13.78□□□□□ -0.2
HSPG2-211ENST00000486901 CREG2Q8IUH2 290 aa13.78□□□□□ -0.2
HSPG2-211ENST00000486901 DUSP9Q99956 384 aaKnown RBP13.78□□□□□ -0.2
HSPG2-211ENST00000486901 EPB41L5Q9HCM4 733 aa13.78□□□□□ -0.2
HSPG2-211ENST00000486901 SAP30BPQ9UHR5 308 aaKnown RBP13.78□□□□□ -0.2
HSPG2-211ENST00000486901 CAPN11Q9UMQ6 739 aa13.78□□□□□ -0.2
HSPG2-211ENST00000486901 SHTN1A0MZ66 631 aa13.78□□□□□ -0.2
HSPG2-211ENST00000486901 CCNT1O60563 726 aaKnown RBP13.78□□□□□ -0.2
HSPG2-211ENST00000486901 BLIDQ8IZY5 108 aa13.78□□□□□ -0.2
HSPG2-211ENST00000486901 ZHX3Q9H4I2 956 aa13.78□□□□□ -0.2
HSPG2-211ENST00000486901 ARHGAP20Q9P2F6 1191 aa13.78□□□□□ -0.2
HSPG2-211ENST00000486901 ITIH6Q6UXX5 1313 aa13.78□□□□□ -0.2
HSPG2-211ENST00000486901 LRRC10BA6NIK2 292 aa13.78□□□□□ -0.2
HSPG2-211ENST00000486901 INPP5BP32019 993 aa13.78□□□□□ -0.2
HSPG2-211ENST00000486901 HLTFQ14527 1009 aaKnown RBP eCLIP13.78□□□□□ -0.2
HSPG2-211ENST00000486901 AEBP2Q6ZN18 517 aaPredicted RBP13.78□□□□□ -0.2
HSPG2-211ENST00000486901 ZNF384Q8TF68 577 aa13.78□□□□□ -0.2
HSPG2-211ENST00000486901 ZIM3Q96PE6 472 aa13.78□□□□□ -0.2
HSPG2-211ENST00000486901 GLI1P08151 1106 aa13.77□□□□□ -0.2
HSPG2-211ENST00000486901 SLC1A4P43007 532 aa13.77□□□□□ -0.2
HSPG2-211ENST00000486901 TFAP4Q01664 338 aa13.77□□□□□ -0.2
HSPG2-211ENST00000486901 CCDC70Q6NSX1 233 aa13.77□□□□□ -0.2
HSPG2-211ENST00000486901 C8orf74Q6P047 294 aa13.77□□□□□ -0.2
HSPG2-211ENST00000486901 DDX42Q86XP3 938 aaKnown RBP eCLIP13.77□□□□□ -0.2
HSPG2-211ENST00000486901 TNFRSF25Q93038 417 aa13.77□□□□□ -0.2
HSPG2-211ENST00000486901 PCDHA13Q9Y5I0 950 aa13.77□□□□□ -0.2
HSPG2-211ENST00000486901 LRRC53A6NM62 1247 aa13.77□□□□□ -0.21
HSPG2-211ENST00000486901 MAGEA1P43355 309 aa13.77□□□□□ -0.21
HSPG2-211ENST00000486901 KIF11P52732 1056 aa13.77□□□□□ -0.21
HSPG2-211ENST00000486901 CKAP4Q07065 602 aaKnown RBP13.77□□□□□ -0.21
HSPG2-211ENST00000486901 NNTQ13423 1086 aa13.77□□□□□ -0.21
HSPG2-211ENST00000486901 PAPD7Q5XG87 772 aaKnown RBP13.77□□□□□ -0.21
HSPG2-211ENST00000486901 CACNA2D4Q7Z3S7 1137 aa13.77□□□□□ -0.21
HSPG2-211ENST00000486901 MARCH10Q8NA82 808 aaPredicted RBP13.77□□□□□ -0.21
HSPG2-211ENST00000486901 ZNF507Q8TCN5 953 aa13.77□□□□□ -0.21
HSPG2-211ENST00000486901 OSBPL9Q96SU4 736 aa13.77□□□□□ -0.21
HSPG2-211ENST00000486901 KRT12Q99456 494 aa13.77□□□□□ -0.21
HSPG2-211ENST00000486901 DNAJC7Q99615 494 aa13.77□□□□□ -0.21
HSPG2-211ENST00000486901 FER1L4A9Z1Z3 1794 aa13.77□□□□□ -0.21
HSPG2-211ENST00000486901 MYH2Q9UKX2 1941 aa13.77□□□□□ -0.21
HSPG2-211ENST00000486901 TMEM94Q12767 1356 aa13.77□□□□□ -0.21
HSPG2-211ENST00000486901 RTL9Q8NET4 1388 aa13.77□□□□□ -0.21
HSPG2-211ENST00000486901 TTI2Q6NXR4 508 aa13.77□□□□□ -0.21
HSPG2-211ENST00000486901 MTMR8Q96EF0 704 aa13.77□□□□□ -0.21
HSPG2-211ENST00000486901 GPR101Q96P66 508 aaPredicted RBP13.77□□□□□ -0.21
HSPG2-211ENST00000486901 JPH2Q9BR39 696 aaPredicted RBP13.77□□□□□ -0.21
HSPG2-211ENST00000486901 MYO1AQ9UBC5 1043 aa13.77□□□□□ -0.21
HSPG2-211ENST00000486901 TACC1O75410 805 aa13.76□□□□□ -0.21
HSPG2-211ENST00000486901 EHHADHQ08426 723 aa13.76□□□□□ -0.21
HSPG2-211ENST00000486901 CHADLQ6NUI6 762 aa13.76□□□□□ -0.21
HSPG2-211ENST00000486901 SAMD1Q6SPF0 538 aaPredicted RBP13.76□□□□□ -0.21
HSPG2-211ENST00000486901 NELFCDQ8IXH7 590 aa13.76□□□□□ -0.21
HSPG2-211ENST00000486901 RMND1Q9NWS8 449 aa13.76□□□□□ -0.21
HSPG2-211ENST00000486901 FAM184BQ9ULE4 1060 aa13.76□□□□□ -0.21
HSPG2-211ENST00000486901 WDR17Q8IZU2 1322 aa13.76□□□□□ -0.21
HSPG2-211ENST00000486901 SIPA1L3O60292 1781 aaPredicted RBP13.76□□□□□ -0.21
HSPG2-211ENST00000486901 CYP19A1P11511 503 aaPredicted RBP13.76□□□□□ -0.21
HSPG2-211ENST00000486901 DNM2P50570 870 aa13.76□□□□□ -0.21
HSPG2-211ENST00000486901 EIF6P56537 245 aaKnown RBP13.76□□□□□ -0.21
HSPG2-211ENST00000486901 ACTN3Q08043 901 aaPredicted RBP13.76□□□□□ -0.21
HSPG2-211ENST00000486901 TRIM28Q13263 835 aaKnown RBP13.76□□□□□ -0.21
HSPG2-211ENST00000486901 CADPS2Q86UW7 1296 aa13.76□□□□□ -0.21
HSPG2-211ENST00000486901 RNPC3Q96LT9 517 aaKnown RBP13.76□□□□□ -0.21
HSPG2-211ENST00000486901 PLA2G12BQ9BX93 195 aa13.76□□□□□ -0.21
HSPG2-211ENST00000486901 UBA5Q9GZZ9 404 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms