RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 DNAJC25Q9H1X3 360 aa13.2□□□□□ -0.3
PRKCB-207ENST00000486868 RANBP17Q9H2T7 1088 aaKnown RBP13.2□□□□□ -0.3
PRKCB-207ENST00000486868 MAGEF1Q9HAY2 307 aa13.2□□□□□ -0.3
PRKCB-207ENST00000486868 BAZ2BQ9UIF8 2168 aaKnown RBP13.2□□□□□ -0.3
PRKCB-207ENST00000486868 SMTNL1A8MU46 457 aa13.19□□□□□ -0.3
PRKCB-207ENST00000486868 IKBKBO14920 756 aa13.19□□□□□ -0.3
PRKCB-207ENST00000486868 WDR46O15213 610 aaKnown RBP13.19□□□□□ -0.3
PRKCB-207ENST00000486868 SMC2O95347 1197 aa13.19□□□□□ -0.3
PRKCB-207ENST00000486868 EGFRP00533 1210 aa13.19□□□□□ -0.3
PRKCB-207ENST00000486868 USP14P54578 494 aa13.19□□□□□ -0.3
PRKCB-207ENST00000486868 PDIA5Q14554 519 aa13.19□□□□□ -0.3
PRKCB-207ENST00000486868 E2F4Q16254 413 aa13.19□□□□□ -0.3
PRKCB-207ENST00000486868 IL17AQ16552 155 aa13.19□□□□□ -0.3
PRKCB-207ENST00000486868 TBC1D10BQ4KMP7 808 aaPredicted RBP13.19□□□□□ -0.3
PRKCB-207ENST00000486868 JAKMIP3Q5VZ66 844 aa13.19□□□□□ -0.3
PRKCB-207ENST00000486868 SARM1Q6SZW1 724 aa13.19□□□□□ -0.3
PRKCB-207ENST00000486868 MIGA2Q7L4E1 593 aa13.19□□□□□ -0.3
PRKCB-207ENST00000486868 SAMD3Q8N6K7 520 aa13.19□□□□□ -0.3
PRKCB-207ENST00000486868 MBOAT7Q96N66 472 aa13.19□□□□□ -0.3
PRKCB-207ENST00000486868 MTMR9Q96QG7 549 aa13.19□□□□□ -0.3
PRKCB-207ENST00000486868 SYT17Q9BSW7 474 aa13.19□□□□□ -0.3
PRKCB-207ENST00000486868 BIN2Q9UBW5 565 aaPredicted RBP13.19□□□□□ -0.3
PRKCB-207ENST00000486868 SERTAD1Q9UHV2 236 aa13.19□□□□□ -0.3
PRKCB-207ENST00000486868 PRR12Q9ULL5 1215 aa13.19□□□□□ -0.3
PRKCB-207ENST00000486868 ZC3H4Q9UPT8 1303 aaKnown RBP13.18□□□□□ -0.3
PRKCB-207ENST00000486868 MYH4Q9Y623 1939 aa13.18□□□□□ -0.3
PRKCB-207ENST00000486868 CCNT1O60563 726 aaKnown RBP13.18□□□□□ -0.3
PRKCB-207ENST00000486868 ECE1P42892 770 aa13.18□□□□□ -0.3
PRKCB-207ENST00000486868 FXR2P51116 673 aaKnown RBP eCLIP13.18□□□□□ -0.37e-8■■■□□ 18.7
PRKCB-207ENST00000486868 LETM2Q2VYF4 491 aa13.18□□□□□ -0.3
PRKCB-207ENST00000486868 SPECC1Q5M775 1068 aa13.18□□□□□ -0.3
PRKCB-207ENST00000486868 NOL9Q5SY16 702 aaKnown RBP13.18□□□□□ -0.3
PRKCB-207ENST00000486868 CDAN1Q8IWY9 1227 aa13.18□□□□□ -0.3
PRKCB-207ENST00000486868 MLKLQ8NB16 471 aa13.18□□□□□ -0.3
PRKCB-207ENST00000486868 TRIM44Q96DX7 344 aaPredicted RBP13.18□□□□□ -0.3
PRKCB-207ENST00000486868 EPSTI1Q96J88 318 aa13.18□□□□□ -0.3
PRKCB-207ENST00000486868 GSDMAQ96QA5 445 aa13.18□□□□□ -0.3
PRKCB-207ENST00000486868 GTPBP4Q9BZE4 634 aaKnown RBP13.18□□□□□ -0.3
PRKCB-207ENST00000486868 RAB34Q9BZG1 259 aa13.18□□□□□ -0.3
PRKCB-207ENST00000486868 MAF1Q9H063 256 aa13.18□□□□□ -0.3
PRKCB-207ENST00000486868 TMEM60Q9H2L4 133 aa13.18□□□□□ -0.3
PRKCB-207ENST00000486868 CCDC39Q9UFE4 941 aa13.18□□□□□ -0.3
PRKCB-207ENST00000486868 DACH1Q9UI36 760 aa13.18□□□□□ -0.3
PRKCB-207ENST00000486868 PCDHA5Q9Y5H7 936 aa13.18□□□□□ -0.3
PRKCB-207ENST00000486868 BECN2A8MW95 431 aa13.17□□□□□ -0.3
PRKCB-207ENST00000486868 GOLGA6L19H0YKK7 550 aa13.17□□□□□ -0.3
PRKCB-207ENST00000486868 MEIS2O14770 477 aa13.17□□□□□ -0.3
PRKCB-207ENST00000486868 TBX3O15119 743 aa13.17□□□□□ -0.3
PRKCB-207ENST00000486868 EDIL3O43854 480 aa13.17□□□□□ -0.3
PRKCB-207ENST00000486868 HOXA7P31268 230 aaPredicted RBP13.17□□□□□ -0.3
PRKCB-207ENST00000486868 CIITAP33076 1130 aa13.17□□□□□ -0.3
PRKCB-207ENST00000486868 SUPT20HL1Q3ZLR7 823 aa13.17□□□□□ -0.3
PRKCB-207ENST00000486868 USP49Q70CQ1 688 aa13.17□□□□□ -0.3
PRKCB-207ENST00000486868 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.17□□□□□ -0.3
PRKCB-207ENST00000486868 SCYL3Q8IZE3 742 aa13.17□□□□□ -0.3
PRKCB-207ENST00000486868 IGSF22Q8N9C0 903 aa13.17□□□□□ -0.3
PRKCB-207ENST00000486868 CRYGNQ8WXF5 182 aa13.17□□□□□ -0.3
PRKCB-207ENST00000486868 SMARCE1Q969G3 411 aa13.17□□□□□ -0.3
PRKCB-207ENST00000486868 AS3MTQ9HBK9 375 aa13.17□□□□□ -0.3
PRKCB-207ENST00000486868 ADARB2Q9NS39 739 aaKnown RBP13.17□□□□□ -0.3
PRKCB-207ENST00000486868 MRPL11Q9Y3B7 192 aaKnown RBP13.17□□□□□ -0.3
PRKCB-207ENST00000486868 GTPBP6O43824 516 aaPredicted RBP13.16□□□□□ -0.3
PRKCB-207ENST00000486868 RAD21O60216 631 aa13.16□□□□□ -0.3
PRKCB-207ENST00000486868 ADCY5O95622 1261 aa13.16□□□□□ -0.3
PRKCB-207ENST00000486868 CYP3A4P08684 503 aa13.16□□□□□ -0.3
PRKCB-207ENST00000486868 UBA7P41226 1012 aa13.16□□□□□ -0.3
PRKCB-207ENST00000486868 TPM4P67936 248 aa13.16□□□□□ -0.3
PRKCB-207ENST00000486868 GHRHRQ02643 423 aa13.16□□□□□ -0.3
PRKCB-207ENST00000486868 IKQ13123 557 aaPredicted RBP13.16□□□□□ -0.3
PRKCB-207ENST00000486868 PNOCQ13519 176 aa13.16□□□□□ -0.3
PRKCB-207ENST00000486868 MORC3Q14149 939 aa13.16□□□□□ -0.3
PRKCB-207ENST00000486868 TMEM266Q2M3C6 531 aa13.16□□□□□ -0.3
PRKCB-207ENST00000486868 KIAA1755Q5JYT7 1200 aa13.16□□□□□ -0.3
PRKCB-207ENST00000486868 FAM83BQ5T0W9 1011 aa13.16□□□□□ -0.3
PRKCB-207ENST00000486868 PDXDC2PQ6P474 469 aa13.16□□□□□ -0.3
PRKCB-207ENST00000486868 C11orf57Q6ZUT1 292 aaPredicted RBP13.16□□□□□ -0.3
PRKCB-207ENST00000486868 LUZP1Q86V48 1076 aa13.16□□□□□ -0.3
PRKCB-207ENST00000486868 DHX58Q96C10 678 aa13.16□□□□□ -0.3
PRKCB-207ENST00000486868 PAGE5Q96GU1 130 aa13.16□□□□□ -0.3
PRKCB-207ENST00000486868 C12orf42Q96LP6 360 aa13.16□□□□□ -0.3
PRKCB-207ENST00000486868 NUP88Q99567 741 aaPredicted RBP13.16□□□□□ -0.3
PRKCB-207ENST00000486868 DISC1Q9NRI5 854 aa13.16□□□□□ -0.3
PRKCB-207ENST00000486868 TMEM260Q9NX78 707 aa13.16□□□□□ -0.3
PRKCB-207ENST00000486868 MAP3K20Q9NYL2 800 aaKnown RBP13.16□□□□□ -0.3
PRKCB-207ENST00000486868 RABGAP1Q9Y3P9 1069 aa13.16□□□□□ -0.3
PRKCB-207ENST00000486868 STK24Q9Y6E0 443 aa13.16□□□□□ -0.3
PRKCB-207ENST00000486868 ABCB11O95342 1321 aa13.15□□□□□ -0.3
PRKCB-207ENST00000486868 A0A087X0B3 334 aa13.15□□□□□ -0.3
PRKCB-207ENST00000486868 C19orf81C9J6K1 198 aa13.15□□□□□ -0.3
PRKCB-207ENST00000486868 TPM3P06753 285 aa13.15□□□□□ -0.3
PRKCB-207ENST00000486868 LMOD1P29536 600 aaPredicted RBP13.15□□□□□ -0.3
PRKCB-207ENST00000486868 CDC25BP30305 580 aa13.15□□□□□ -0.3
PRKCB-207ENST00000486868 SREBF1P36956 1147 aa13.15□□□□□ -0.3
PRKCB-207ENST00000486868 DPYDQ12882 1025 aa13.15□□□□□ -0.3
PRKCB-207ENST00000486868 CALCRLQ16602 461 aa13.15□□□□□ -0.3
PRKCB-207ENST00000486868 NBPF12Q5TAG4 269 aaPredicted RBP13.15□□□□□ -0.3
PRKCB-207ENST00000486868 ANGEL2Q5VTE6 544 aaKnown RBP13.15□□□□□ -0.3
PRKCB-207ENST00000486868 DHX40Q8IX18 779 aaKnown RBP13.15□□□□□ -0.3
PRKCB-207ENST00000486868 KCTD17Q8N5Z5 321 aa13.15□□□□□ -0.3
PRKCB-207ENST00000486868 PRPF38AQ8NAV1 312 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms