RNA–Protein interactions for RNA: ENST00000486554.1

TSC22D3-208, Transcript of TSC22 domain family member 3, humanhuman

TSL 2

Gene TSC22D3, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-208ENST00000486554 BANK1Q8NDB2 785 aa16.53■□□□□ 0.24
TSC22D3-208ENST00000486554 NKD2Q969F2 451 aaPredicted RBP16.53■□□□□ 0.24
TSC22D3-208ENST00000486554 CLUAP1Q96AJ1 413 aa16.53■□□□□ 0.24
TSC22D3-208ENST00000486554 MYH1P12882 1939 aa16.53■□□□□ 0.24
TSC22D3-208ENST00000486554 PARP14Q460N5 1801 aa16.52■□□□□ 0.24
TSC22D3-208ENST00000486554 TNKSO95271 1327 aa16.52■□□□□ 0.24
TSC22D3-208ENST00000486554 MCM3APO60318 1980 aa16.52■□□□□ 0.24
TSC22D3-208ENST00000486554 A0A1B0GUL7 405 aa16.52■□□□□ 0.24
TSC22D3-208ENST00000486554 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.52■□□□□ 0.24
TSC22D3-208ENST00000486554 STXBP3O00186 592 aa16.52■□□□□ 0.24
TSC22D3-208ENST00000486554 ZEB2O60315 1214 aa16.52■□□□□ 0.24
TSC22D3-208ENST00000486554 COPB2P35606 906 aa16.52■□□□□ 0.24
TSC22D3-208ENST00000486554 DEFB103AP81534 67 aa16.52■□□□□ 0.24
TSC22D3-208ENST00000486554 ADGRA1Q86SQ6 560 aa16.52■□□□□ 0.24
TSC22D3-208ENST00000486554 TLK2Q86UE8 772 aa16.52■□□□□ 0.24
TSC22D3-208ENST00000486554 RMDN1Q96DB5 314 aa16.52■□□□□ 0.24
TSC22D3-208ENST00000486554 RAD9AQ99638 391 aa16.52■□□□□ 0.24
TSC22D3-208ENST00000486554 EHD4Q9H223 541 aa16.52■□□□□ 0.24
TSC22D3-208ENST00000486554 TANC1Q9C0D5 1861 aa16.52■□□□□ 0.23
TSC22D3-208ENST00000486554 MBTPS2O43462 519 aa16.51■□□□□ 0.23
TSC22D3-208ENST00000486554 IQCF3P0C7M6 154 aa16.51■□□□□ 0.23
TSC22D3-208ENST00000486554 SHMT1P34896 483 aa16.51■□□□□ 0.23
TSC22D3-208ENST00000486554 TNFAIP2Q03169 654 aa16.51■□□□□ 0.23
TSC22D3-208ENST00000486554 ARMCX2Q7L311 632 aa16.51■□□□□ 0.23
TSC22D3-208ENST00000486554 ZNF467Q7Z7K2 595 aaPredicted RBP16.51■□□□□ 0.23
TSC22D3-208ENST00000486554 RPAINQ86UA6 219 aa16.51■□□□□ 0.23
TSC22D3-208ENST00000486554 RETREG2Q8NC44 543 aa16.51■□□□□ 0.23
TSC22D3-208ENST00000486554 C17orf80Q9BSJ5 609 aa16.51■□□□□ 0.23
TSC22D3-208ENST00000486554 PA2G4Q9UQ80 394 aaKnown RBP16.51■□□□□ 0.23
TSC22D3-208ENST00000486554 TPRP12270 2363 aaKnown RBP16.51■□□□□ 0.23
TSC22D3-208ENST00000486554 NCOR2Q9Y618 2525 aa16.5■□□□□ 0.23
TSC22D3-208ENST00000486554 GALR2O43603 387 aaPredicted RBP16.5■□□□□ 0.23
TSC22D3-208ENST00000486554 SIGLEC14Q08ET2 396 aa16.5■□□□□ 0.23
TSC22D3-208ENST00000486554 COL9A2Q14055 689 aaPredicted RBP16.5■□□□□ 0.23
TSC22D3-208ENST00000486554 COL19A1Q14993 1142 aa16.5■□□□□ 0.23
TSC22D3-208ENST00000486554 NBPF20Q3BBV1 942 aa16.5■□□□□ 0.23
TSC22D3-208ENST00000486554 AP5M1Q9H0R1 490 aa16.5■□□□□ 0.23
TSC22D3-208ENST00000486554 GVINP1Q7Z2Y8 2422 aa16.5■□□□□ 0.23
TSC22D3-208ENST00000486554 PKD1L2Q7Z442 2459 aa16.5■□□□□ 0.23
TSC22D3-208ENST00000486554 TET1Q8NFU7 2136 aa16.49■□□□□ 0.23
TSC22D3-208ENST00000486554 DMDP11532 3685 aa16.49■□□□□ 0.23
TSC22D3-208ENST00000486554 DNAJC25-GNG10A0A024R161 153 aa16.49■□□□□ 0.23
TSC22D3-208ENST00000486554 GJB5O95377 273 aa16.49■□□□□ 0.23
TSC22D3-208ENST00000486554 PTGS1P23219 599 aa16.49■□□□□ 0.23
TSC22D3-208ENST00000486554 USP5P45974 858 aa16.49■□□□□ 0.23
TSC22D3-208ENST00000486554 DYNLL1P63167 89 aaKnown RBP16.49■□□□□ 0.23
TSC22D3-208ENST00000486554 GORABQ5T7V8 394 aa16.49■□□□□ 0.23
TSC22D3-208ENST00000486554 FAM117BQ6P1L5 589 aa16.49■□□□□ 0.23
TSC22D3-208ENST00000486554 FRMD5Q7Z6J6 570 aa16.49■□□□□ 0.23
TSC22D3-208ENST00000486554 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.49■□□□□ 0.23
TSC22D3-208ENST00000486554 COL26A1Q96A83 441 aa16.49■□□□□ 0.23
TSC22D3-208ENST00000486554 NEUROD6Q96NK8 337 aa16.49■□□□□ 0.23
TSC22D3-208ENST00000486554 NSUN3Q9H649 340 aaKnown RBP16.49■□□□□ 0.23
TSC22D3-208ENST00000486554 ZBTB40Q9NUA8 1239 aa16.49■□□□□ 0.23
TSC22D3-208ENST00000486554 FBXO28Q9NVF7 368 aa16.49■□□□□ 0.23
TSC22D3-208ENST00000486554 ZNF214Q9UL59 606 aaPredicted RBP16.49■□□□□ 0.23
TSC22D3-208ENST00000486554 ADAMTS5Q9UNA0 930 aa16.49■□□□□ 0.23
TSC22D3-208ENST00000486554 VWA5AO00534 786 aa16.48■□□□□ 0.23
TSC22D3-208ENST00000486554 WDR46O15213 610 aaKnown RBP16.48■□□□□ 0.23
TSC22D3-208ENST00000486554 LTBRP36941 435 aa16.48■□□□□ 0.23
TSC22D3-208ENST00000486554 NUBP1P53384 320 aa16.48■□□□□ 0.23
TSC22D3-208ENST00000486554 TTC6Q86TZ1 520 aa16.48■□□□□ 0.23
TSC22D3-208ENST00000486554 MAGEB6Q8N7X4 407 aa16.48■□□□□ 0.23
TSC22D3-208ENST00000486554 MEIS3Q99687 375 aa16.48■□□□□ 0.23
TSC22D3-208ENST00000486554 PITPNM1O00562 1244 aa16.47■□□□□ 0.23
TSC22D3-208ENST00000486554 DYNC1LI2O43237 492 aaPredicted RBP16.47■□□□□ 0.23
TSC22D3-208ENST00000486554 MCAMP43121 646 aa16.47■□□□□ 0.23
TSC22D3-208ENST00000486554 SMAD4Q13485 552 aaKnown RBP16.47■□□□□ 0.23
TSC22D3-208ENST00000486554 FTSJ3Q8IY81 847 aaKnown RBP16.47■□□□□ 0.23
TSC22D3-208ENST00000486554 CCDC144CPQ8IYA2 1237 aa16.47■□□□□ 0.23
TSC22D3-208ENST00000486554 ASIC4Q96FT7 647 aa16.47■□□□□ 0.23
TSC22D3-208ENST00000486554 KATNBL1Q9H079 304 aa16.47■□□□□ 0.23
TSC22D3-208ENST00000486554 GNEQ9Y223 722 aaKnown RBP16.47■□□□□ 0.23
TSC22D3-208ENST00000486554 AKAP2Q9Y2D5 859 aa16.47■□□□□ 0.23
TSC22D3-208ENST00000486554 COG6Q9Y2V7 657 aa16.47■□□□□ 0.23
TSC22D3-208ENST00000486554 ARID4AP29374 1257 aaPredicted RBP16.46■□□□□ 0.23
TSC22D3-208ENST00000486554 SLC4A3P48751 1232 aa16.46■□□□□ 0.23
TSC22D3-208ENST00000486554 DLX2Q07687 328 aaPredicted RBP16.46■□□□□ 0.23
TSC22D3-208ENST00000486554 MKRN4PQ13434 485 aaPredicted RBP16.46■□□□□ 0.23
TSC22D3-208ENST00000486554 FAM47CQ5HY64 1035 aa16.46■□□□□ 0.23
TSC22D3-208ENST00000486554 MCTP2Q6DN12 878 aa16.46■□□□□ 0.23
TSC22D3-208ENST00000486554 SNRNP48Q6IEG0 339 aaKnown RBP16.46■□□□□ 0.23
TSC22D3-208ENST00000486554 CLEC10AQ8IUN9 316 aa16.46■□□□□ 0.23
TSC22D3-208ENST00000486554 FGD4Q96M96 766 aa16.46■□□□□ 0.23
TSC22D3-208ENST00000486554 VCPKMTQ9H867 229 aa16.46■□□□□ 0.23
TSC22D3-208ENST00000486554 ARHGEF10LQ9HCE6 1279 aa16.46■□□□□ 0.23
TSC22D3-208ENST00000486554 DDX19BQ9UMR2 479 aa16.46■□□□□ 0.23
TSC22D3-208ENST00000486554 DNAH14Q0VDD8 3507 aa16.45■□□□□ 0.22
TSC22D3-208ENST00000486554 TFCP2Q12800 502 aa16.45■□□□□ 0.22
TSC22D3-208ENST00000486554 BFSP2Q13515 415 aa16.45■□□□□ 0.22
TSC22D3-208ENST00000486554 ST3GAL2Q16842 350 aa16.45■□□□□ 0.22
TSC22D3-208ENST00000486554 REPS2Q8NFH8 660 aa16.45■□□□□ 0.22
TSC22D3-208ENST00000486554 TEX13BQ9BXU2 312 aa16.45■□□□□ 0.22
TSC22D3-208ENST00000486554 PPP1R9AQ9ULJ8 1098 aa16.45■□□□□ 0.22
TSC22D3-208ENST00000486554 CHD8Q9HCK8 2581 aa16.45■□□□□ 0.22
TSC22D3-208ENST00000486554 NCK2O43639 380 aa16.44■□□□□ 0.22
TSC22D3-208ENST00000486554 GNAI3P08754 354 aa16.44■□□□□ 0.22
TSC22D3-208ENST00000486554 PLCD1P51178 756 aa16.44■□□□□ 0.22
TSC22D3-208ENST00000486554 GPM6BQ13491 265 aa16.44■□□□□ 0.22
TSC22D3-208ENST00000486554 MTX1Q13505 466 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms