RNA–Protein interactions for RNA: ENST00000486524.1

SLX4-203, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 2

Gene SLX4, Length 3,075 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-203ENST00000486524 TNNI2P48788 182 aa12.66□□□□□ -0.38
SLX4-203ENST00000486524 COPB1P53618 953 aaKnown RBP12.66□□□□□ -0.38
SLX4-203ENST00000486524 SYCP1Q15431 976 aa12.66□□□□□ -0.38
SLX4-203ENST00000486524 UBE2SQ16763 222 aa12.66□□□□□ -0.38
SLX4-203ENST00000486524 SHROOM1Q2M3G4 852 aaPredicted RBP12.66□□□□□ -0.38
SLX4-203ENST00000486524 TMC4Q7Z404 712 aa12.66□□□□□ -0.38
SLX4-203ENST00000486524 FCHSD1Q86WN1 690 aa12.66□□□□□ -0.38
SLX4-203ENST00000486524 ANKRD20A12PQ8NF67 263 aa12.66□□□□□ -0.38
SLX4-203ENST00000486524 TEKT1Q969V4 418 aa12.66□□□□□ -0.38
SLX4-203ENST00000486524 IRX2Q9BZI1 471 aaPredicted RBP12.66□□□□□ -0.38
SLX4-203ENST00000486524 CCSER1Q9C0I3 900 aa12.66□□□□□ -0.38
SLX4-203ENST00000486524 RIOX1Q9H6W3 641 aa12.66□□□□□ -0.38
SLX4-203ENST00000486524 ZHX1Q9UKY1 873 aaPredicted RBP12.66□□□□□ -0.38
SLX4-203ENST00000486524 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.66□□□□□ -0.38
SLX4-203ENST00000486524 ADAMTSL1Q8N6G6 1762 aa12.66□□□□□ -0.38
SLX4-203ENST00000486524 TDP2O95551 362 aa12.66□□□□□ -0.38
SLX4-203ENST00000486524 PBX1P40424 430 aa12.66□□□□□ -0.38
SLX4-203ENST00000486524 ADCY7P51828 1080 aa12.66□□□□□ -0.38
SLX4-203ENST00000486524 RAD9BQ6WBX8 426 aa12.66□□□□□ -0.38
SLX4-203ENST00000486524 HPS3Q969F9 1004 aa12.66□□□□□ -0.38
SLX4-203ENST00000486524 TRIM47Q96LD4 638 aa12.66□□□□□ -0.38
SLX4-203ENST00000486524 NUP88Q99567 741 aaPredicted RBP12.66□□□□□ -0.38
SLX4-203ENST00000486524 MRPL44Q9H9J2 332 aaKnown RBP12.66□□□□□ -0.38
SLX4-203ENST00000486524 L2HGDHQ9H9P8 463 aa12.66□□□□□ -0.38
SLX4-203ENST00000486524 ANKRD31Q8N7Z5 1873 aa12.66□□□□□ -0.38
SLX4-203ENST00000486524 KLRC4O43908 158 aa12.65□□□□□ -0.38
SLX4-203ENST00000486524 MFAP3LO75121 409 aa12.65□□□□□ -0.38
SLX4-203ENST00000486524 SHMT1P34896 483 aa12.65□□□□□ -0.38
SLX4-203ENST00000486524 PRPHP41219 470 aa12.65□□□□□ -0.38
SLX4-203ENST00000486524 ASIC1P78348 528 aa12.65□□□□□ -0.38
SLX4-203ENST00000486524 UBXN1Q04323 297 aa12.65□□□□□ -0.38
SLX4-203ENST00000486524 ADGRF4Q8IZF3 695 aa12.65□□□□□ -0.38
SLX4-203ENST00000486524 ADSSL1Q8N142 457 aa12.65□□□□□ -0.38
SLX4-203ENST00000486524 GJA10Q969M2 543 aa12.65□□□□□ -0.38
SLX4-203ENST00000486524 PANX2Q96RD6 677 aa12.65□□□□□ -0.38
SLX4-203ENST00000486524 KBTBD4Q9NVX7 518 aa12.65□□□□□ -0.38
SLX4-203ENST00000486524 PARP3Q9Y6F1 533 aa12.65□□□□□ -0.38
SLX4-203ENST00000486524 PHLPP2Q6ZVD8 1323 aa12.65□□□□□ -0.38
SLX4-203ENST00000486524 SLC37A4O43826 429 aa12.65□□□□□ -0.38
SLX4-203ENST00000486524 ALDH1B1P30837 517 aa12.65□□□□□ -0.38
SLX4-203ENST00000486524 CALCRLQ16602 461 aa12.65□□□□□ -0.38
SLX4-203ENST00000486524 TMEM132AQ24JP5 1023 aa12.65□□□□□ -0.38
SLX4-203ENST00000486524 ASPRV1Q53RT3 343 aa12.65□□□□□ -0.38
SLX4-203ENST00000486524 APOBEC3HQ6NTF7 200 aaKnown RBP12.65□□□□□ -0.38
SLX4-203ENST00000486524 ZSCAN29Q8IWY8 852 aaPredicted RBP12.65□□□□□ -0.38
SLX4-203ENST00000486524 SRRTQ9BXP5 876 aaKnown RBP12.65□□□□□ -0.38
SLX4-203ENST00000486524 PRDM10Q9NQV6 1147 aa12.65□□□□□ -0.38
SLX4-203ENST00000486524 CGNQ9P2M7 1197 aaKnown RBP12.65□□□□□ -0.38
SLX4-203ENST00000486524 LIMA1Q9UHB6 759 aaKnown RBP12.65□□□□□ -0.38
SLX4-203ENST00000486524 LTBP1Q14766 1721 aa12.65□□□□□ -0.38
SLX4-203ENST00000486524 RNF225M0QZC1 329 aaPredicted RBP12.65□□□□□ -0.38
SLX4-203ENST00000486524 HLA-DOAP06340 250 aa12.65□□□□□ -0.38
SLX4-203ENST00000486524 TPM1P09493 284 aa12.65□□□□□ -0.38
SLX4-203ENST00000486524 CASQ1P31415 396 aa12.65□□□□□ -0.38
SLX4-203ENST00000486524 PDE4DQ08499 809 aa12.65□□□□□ -0.38
SLX4-203ENST00000486524 CCDC93Q567U6 631 aa12.65□□□□□ -0.38
SLX4-203ENST00000486524 JMJD4Q9H9V9 463 aa12.65□□□□□ -0.38
SLX4-203ENST00000486524 MYH8P13535 1937 aa12.64□□□□□ -0.39
SLX4-203ENST00000486524 USP17L10C9JJH3 530 aa12.64□□□□□ -0.39
SLX4-203ENST00000486524 CCDC175P0C221 793 aa12.64□□□□□ -0.39
SLX4-203ENST00000486524 FCER1AP12319 257 aa12.64□□□□□ -0.39
SLX4-203ENST00000486524 PDE6BP35913 854 aa12.64□□□□□ -0.39
SLX4-203ENST00000486524 CRKP46108 304 aa12.64□□□□□ -0.39
SLX4-203ENST00000486524 STIM1Q13586 685 aa12.64□□□□□ -0.39
SLX4-203ENST00000486524 POTEMA6NI47 508 aa12.64□□□□□ -0.39
SLX4-203ENST00000486524 PSMA7O14818 248 aa12.64□□□□□ -0.39
SLX4-203ENST00000486524 PPP1R11O60927 126 aaPredicted RBP12.64□□□□□ -0.39
SLX4-203ENST00000486524 NOVP48745 357 aa12.64□□□□□ -0.39
SLX4-203ENST00000486524 SPAG1Q07617 926 aa12.64□□□□□ -0.39
SLX4-203ENST00000486524 ZNF543Q08ER8 600 aa12.64□□□□□ -0.39
SLX4-203ENST00000486524 FBXO38Q6PIJ6 1188 aa12.64□□□□□ -0.39
SLX4-203ENST00000486524 IRF2BP1Q8IU81 584 aa12.64□□□□□ -0.39
SLX4-203ENST00000486524 MNS1Q8NEH6 495 aa12.64□□□□□ -0.39
SLX4-203ENST00000486524 AK8Q96MA6 479 aa12.64□□□□□ -0.39
SLX4-203ENST00000486524 CARD6Q9BX69 1037 aa12.64□□□□□ -0.39
SLX4-203ENST00000486524 EXOC1Q9NV70 894 aa12.64□□□□□ -0.39
SLX4-203ENST00000486524 LRRC37AA6NMS7 1700 aa12.64□□□□□ -0.39
SLX4-203ENST00000486524 IGKV6D-41A0A0C4DH26 115 aa12.63□□□□□ -0.39
SLX4-203ENST00000486524 TUBB4AP04350 444 aa12.63□□□□□ -0.39
SLX4-203ENST00000486524 SMARCA1P28370 1054 aa12.63□□□□□ -0.39
SLX4-203ENST00000486524 CNGA4Q8IV77 575 aa12.63□□□□□ -0.39
SLX4-203ENST00000486524 GIMAP8Q8ND71 665 aaPredicted RBP12.63□□□□□ -0.39
SLX4-203ENST00000486524 CALML4Q96GE6 196 aa12.63□□□□□ -0.39
SLX4-203ENST00000486524 MASTLQ96GX5 879 aa12.63□□□□□ -0.39
SLX4-203ENST00000486524 MMTAG2Q9BU76 263 aaKnown RBP12.63□□□□□ -0.39
SLX4-203ENST00000486524 TRIM9Q9C026 710 aa12.63□□□□□ -0.39
SLX4-203ENST00000486524 LRWD1Q9UFC0 647 aa12.63□□□□□ -0.39
SLX4-203ENST00000486524 SUGT1Q9Y2Z0 365 aa12.63□□□□□ -0.39
SLX4-203ENST00000486524 FOCADQ5VW36 1801 aa12.63□□□□□ -0.39
SLX4-203ENST00000486524 H7C1D1 291 aa12.63□□□□□ -0.39
SLX4-203ENST00000486524 RHOBTB3O94955 611 aa12.63□□□□□ -0.39
SLX4-203ENST00000486524 STK4Q13043 487 aa12.63□□□□□ -0.39
SLX4-203ENST00000486524 DYMQ7RTS9 669 aa12.63□□□□□ -0.39
SLX4-203ENST00000486524 ACRBPQ8NEB7 543 aa12.63□□□□□ -0.39
SLX4-203ENST00000486524 SWAP70Q9UH65 585 aa12.63□□□□□ -0.39
SLX4-203ENST00000486524 PLIN4Q96Q06 1357 aa12.63□□□□□ -0.39
SLX4-203ENST00000486524 KCNB1Q14721 858 aa12.63□□□□□ -0.39
SLX4-203ENST00000486524 PAXIP1Q6ZW49 1069 aaPredicted RBP12.63□□□□□ -0.39
SLX4-203ENST00000486524 C2CD5Q86YS7 1000 aa12.63□□□□□ -0.39
SLX4-203ENST00000486524 CSGALNACT2Q8N6G5 542 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms