RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 ACSL6Q9UKU0 697 aa8.39□□□□□ -1.07
LTN1-206ENST00000486427 NOP56O00567 594 aaKnown RBP8.38□□□□□ -1.07
LTN1-206ENST00000486427 MSL3P1P0C860 447 aa8.38□□□□□ -1.07
LTN1-206ENST00000486427 PNLIPP16233 465 aa8.38□□□□□ -1.07
LTN1-206ENST00000486427 PRKCAP17252 672 aa8.38□□□□□ -1.07
LTN1-206ENST00000486427 ATP2B1P20020 1258 aa8.38□□□□□ -1.07
LTN1-206ENST00000486427 SDHBP21912 280 aa8.38□□□□□ -1.07
LTN1-206ENST00000486427 CYP4F3Q08477 520 aa8.38□□□□□ -1.07
LTN1-206ENST00000486427 EEF1DP3Q658K8 133 aa8.38□□□□□ -1.07
LTN1-206ENST00000486427 ZNF227Q86WZ6 799 aa8.38□□□□□ -1.07
LTN1-206ENST00000486427 IRF2BP1Q8IU81 584 aa8.38□□□□□ -1.07
LTN1-206ENST00000486427 NUP43Q8NFH3 380 aa8.38□□□□□ -1.07
LTN1-206ENST00000486427 BTN2A2Q8WVV5 523 aa8.38□□□□□ -1.07
LTN1-206ENST00000486427 EPB41L4BQ9H329 900 aa8.38□□□□□ -1.07
LTN1-206ENST00000486427 DCP1AQ9NPI6 582 aaPredicted RBP8.38□□□□□ -1.07
LTN1-206ENST00000486427 PDE6BP35913 854 aa8.37□□□□□ -1.07
LTN1-206ENST00000486427 MVKQ03426 396 aa8.37□□□□□ -1.07
LTN1-206ENST00000486427 SCRN1Q12765 414 aa8.37□□□□□ -1.07
LTN1-206ENST00000486427 SLC10A6Q3KNW5 377 aa8.37□□□□□ -1.07
LTN1-206ENST00000486427 ADGRF1Q5T601 910 aa8.37□□□□□ -1.07
LTN1-206ENST00000486427 POMZP3Q6PJE2 187 aa8.37□□□□□ -1.07
LTN1-206ENST00000486427 CRACR2BQ8N4Y2 399 aaPredicted RBP8.37□□□□□ -1.07
LTN1-206ENST00000486427 TBC1D8O95759 1140 aa8.36□□□□□ -1.07
LTN1-206ENST00000486427 C8AP07357 584 aa8.36□□□□□ -1.07
LTN1-206ENST00000486427 SEPHS1P49903 392 aa8.36□□□□□ -1.07
LTN1-206ENST00000486427 EEPD1Q7L9B9 569 aa8.36□□□□□ -1.07
LTN1-206ENST00000486427 JAMLQ86YT9 394 aa8.36□□□□□ -1.07
LTN1-206ENST00000486427 COPS5Q92905 334 aa8.36□□□□□ -1.07
LTN1-206ENST00000486427 FAM84AQ96KN4 292 aa8.36□□□□□ -1.07
LTN1-206ENST00000486427 KRTAP4-7Q9BYR0 210 aa8.36□□□□□ -1.07
LTN1-206ENST00000486427 GPRC5CQ9NQ84 441 aa8.36□□□□□ -1.07
LTN1-206ENST00000486427 LRP2BPQ9P2M1 347 aa8.36□□□□□ -1.07
LTN1-206ENST00000486427 GTF2F1P35269 517 aaKnown RBP eCLIP8.35□□□□□ -1.07
LTN1-206ENST00000486427 CYP4F8P98187 520 aa8.35□□□□□ -1.07
LTN1-206ENST00000486427 LAPTM5Q13571 262 aa8.35□□□□□ -1.07
LTN1-206ENST00000486427 ZNF124Q15973 351 aa8.35□□□□□ -1.07
LTN1-206ENST00000486427 ZNF605Q86T29 641 aa8.35□□□□□ -1.07
LTN1-206ENST00000486427 CPNE8Q86YQ8 564 aa8.35□□□□□ -1.07
LTN1-206ENST00000486427 KSR1Q8IVT5 923 aa8.35□□□□□ -1.07
LTN1-206ENST00000486427 CKAP2LQ8IYA6 745 aa8.35□□□□□ -1.07
LTN1-206ENST00000486427 FBXO15Q8NCQ5 510 aaPredicted RBP8.35□□□□□ -1.07
LTN1-206ENST00000486427 NKX2-4Q9H2Z4 354 aa8.35□□□□□ -1.07
LTN1-206ENST00000486427 ZNF552Q9H707 407 aaPredicted RBP8.35□□□□□ -1.07
LTN1-206ENST00000486427 MYOCOSA0A1B0GUC4 107 aa8.34□□□□□ -1.07
LTN1-206ENST00000486427 THBDP07204 575 aa8.34□□□□□ -1.07
LTN1-206ENST00000486427 ERVFRD-1P60508 538 aa8.34□□□□□ -1.07
LTN1-206ENST00000486427 SF1Q15637 639 aaKnown RBP8.34□□□□□ -1.07
LTN1-206ENST00000486427 SYDE1Q6ZW31 735 aaPredicted RBP8.34□□□□□ -1.07
LTN1-206ENST00000486427 TRIM55Q9BYV6 548 aa8.34□□□□□ -1.07
LTN1-206ENST00000486427 TNFRSF12AQ9NP84 129 aa8.34□□□□□ -1.07
LTN1-206ENST00000486427 CYP26B1Q9NR63 512 aa8.34□□□□□ -1.07
LTN1-206ENST00000486427 CLEC1BQ9P126 229 aa8.34□□□□□ -1.07
LTN1-206ENST00000486427 OR14I1A6ND48 311 aa8.33□□□□□ -1.08
LTN1-206ENST00000486427 KRT1P04264 644 aa8.33□□□□□ -1.08
LTN1-206ENST00000486427 CAPNS1P04632 268 aa8.33□□□□□ -1.08
LTN1-206ENST00000486427 PLS3P13797 630 aa8.33□□□□□ -1.08
LTN1-206ENST00000486427 L1CAMP32004 1257 aa8.33□□□□□ -1.08
LTN1-206ENST00000486427 MBLAC2Q68D91 279 aa8.33□□□□□ -1.08
LTN1-206ENST00000486427 MCOLN1Q9GZU1 580 aa8.33□□□□□ -1.08
LTN1-206ENST00000486427 EPN3Q9H201 632 aa8.33□□□□□ -1.08
LTN1-206ENST00000486427 A0A1W2PQ27 194 aa8.32□□□□□ -1.08
LTN1-206ENST00000486427 A0A1W2PQ64 194 aa8.32□□□□□ -1.08
LTN1-206ENST00000486427 A0A1W2PQC6 194 aa8.32□□□□□ -1.08
LTN1-206ENST00000486427 A0A1W2PQD8 194 aa8.32□□□□□ -1.08
LTN1-206ENST00000486427 PPP1R11O60927 126 aaPredicted RBP8.32□□□□□ -1.08
LTN1-206ENST00000486427 PAMP19021 973 aa8.32□□□□□ -1.08
LTN1-206ENST00000486427 TACR1P25103 407 aa8.32□□□□□ -1.08
LTN1-206ENST00000486427 GRIA2P42262 883 aa8.32□□□□□ -1.08
LTN1-206ENST00000486427 NPM2Q86SE8 214 aaKnown RBP8.32□□□□□ -1.08
LTN1-206ENST00000486427 NPLOC4Q8TAT6 608 aa8.32□□□□□ -1.08
LTN1-206ENST00000486427 FRS2Q8WU20 508 aa8.32□□□□□ -1.08
LTN1-206ENST00000486427 PPP1R1BQ9UD71 204 aaPredicted RBP8.32□□□□□ -1.08
LTN1-206ENST00000486427 MSRB2Q9Y3D2 182 aa8.32□□□□□ -1.08
LTN1-206ENST00000486427 NPHP3-ACAD11A0A0J9YXS1 232 aa8.31□□□□□ -1.08
LTN1-206ENST00000486427 A0A1W2PQU0 124 aa8.31□□□□□ -1.08
LTN1-206ENST00000486427 ARNTLO00327 626 aa8.31□□□□□ -1.08
LTN1-206ENST00000486427 ARL4AP40617 200 aa8.31□□□□□ -1.08
LTN1-206ENST00000486427 LCE1DQ5T752 114 aa8.31□□□□□ -1.08
LTN1-206ENST00000486427 NLGN2Q8NFZ4 835 aa8.31□□□□□ -1.08
LTN1-206ENST00000486427 SLC38A3Q99624 504 aa8.31□□□□□ -1.08
LTN1-206ENST00000486427 PDLIM7Q9NR12 457 aa8.31□□□□□ -1.08
LTN1-206ENST00000486427 KLHL14Q9P2G3 628 aa8.31□□□□□ -1.08
LTN1-206ENST00000486427 FBLN5Q9UBX5 448 aa8.31□□□□□ -1.08
LTN1-206ENST00000486427 SNRPB2P08579 225 aaKnown RBP8.3□□□□□ -1.08
LTN1-206ENST00000486427 ECI1P42126 302 aa8.3□□□□□ -1.08
LTN1-206ENST00000486427 CORO7P57737 925 aa8.3□□□□□ -1.08
LTN1-206ENST00000486427 PPP2R2AP63151 447 aa8.3□□□□□ -1.08
LTN1-206ENST00000486427 YBX1P67809 324 aaKnown RBP8.3□□□□□ -1.08
LTN1-206ENST00000486427 PRSS53Q2L4Q9 553 aa8.3□□□□□ -1.08
LTN1-206ENST00000486427 ARMC5Q96C12 935 aa8.3□□□□□ -1.08
LTN1-206ENST00000486427 SLC26A8Q96RN1 970 aa8.3□□□□□ -1.08
LTN1-206ENST00000486427 TMEFF2Q9UIK5 374 aaPredicted RBP8.3□□□□□ -1.08
LTN1-206ENST00000486427 C7orf72A4D263 438 aa8.29□□□□□ -1.08
LTN1-206ENST00000486427 NUDT19A8MXV4 375 aa8.29□□□□□ -1.08
LTN1-206ENST00000486427 ETV2O00321 342 aaPredicted RBP8.29□□□□□ -1.08
LTN1-206ENST00000486427 PEX10O60683 326 aa8.29□□□□□ -1.08
LTN1-206ENST00000486427 MPOP05164 745 aa8.29□□□□□ -1.08
LTN1-206ENST00000486427 SCG5P05408 212 aa8.29□□□□□ -1.08
LTN1-206ENST00000486427 HOXC12P31275 282 aa8.29□□□□□ -1.08
LTN1-206ENST00000486427 GFRA1P56159 465 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms