RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 CCDC96Q2M329 555 aa15.1■□□□□ 0.01
SSR4-211ENST00000486204 TRIM60Q495X7 471 aa15.1■□□□□ 0.01
SSR4-211ENST00000486204 SH3RF1Q7Z6J0 888 aa15.1■□□□□ 0.01
SSR4-211ENST00000486204 FAM160B2Q86V87 743 aa15.1■□□□□ 0.01
SSR4-211ENST00000486204 ARRDC4Q8NCT1 418 aa15.1■□□□□ 0.01
SSR4-211ENST00000486204 KIFC2Q96AC6 838 aa15.1■□□□□ 0.01
SSR4-211ENST00000486204 TRIM43Q96BQ3 446 aaPredicted RBP15.1■□□□□ 0.01
SSR4-211ENST00000486204 NEK1Q96PY6 1258 aa15.1■□□□□ 0.01
SSR4-211ENST00000486204 ZNF576Q9H609 170 aa15.1■□□□□ 0.01
SSR4-211ENST00000486204 SLC38A10Q9HBR0 1119 aa15.1■□□□□ 0.01
SSR4-211ENST00000486204 PDLIM7Q9NR12 457 aa15.1■□□□□ 0.01
SSR4-211ENST00000486204 FLRT1Q9NZU1 646 aa15.1■□□□□ 0.01
SSR4-211ENST00000486204 THEGQ9P2T0 379 aa15.1■□□□□ 0.01
SSR4-211ENST00000486204 PRR12Q9ULL5 1215 aa15.1■□□□□ 0.01
SSR4-211ENST00000486204 WDR19Q8NEZ3 1342 aa15.1■□□□□ 0.01
SSR4-211ENST00000486204 ATP2A1O14983 1001 aa15.09■□□□□ 0.01
SSR4-211ENST00000486204 SEC24BO95487 1268 aa15.09■□□□□ 0.01
SSR4-211ENST00000486204 MRPS5P82675 430 aaKnown RBP15.09■□□□□ 0.01
SSR4-211ENST00000486204 EXOSC10Q01780 885 aaKnown RBP15.09■□□□□ 0.01
SSR4-211ENST00000486204 KRT32Q14532 448 aa15.09■□□□□ 0.01
SSR4-211ENST00000486204 SART3Q15020 963 aaKnown RBP15.09■□□□□ 0.01
SSR4-211ENST00000486204 TMEM67Q5HYA8 995 aa15.09■□□□□ 0.01
SSR4-211ENST00000486204 SHCBP1Q8NEM2 672 aa15.09■□□□□ 0.01
SSR4-211ENST00000486204 CHURC1Q8WUH1 139 aa15.09■□□□□ 0.01
SSR4-211ENST00000486204 TMEM87BQ96K49 555 aa15.09■□□□□ 0.01
SSR4-211ENST00000486204 C1QTNF1Q9BXJ1 281 aa15.09■□□□□ 0.01
SSR4-211ENST00000486204 GPCPD1Q9NPB8 672 aa15.09■□□□□ 0.01
SSR4-211ENST00000486204 ZNF536O15090 1300 aa15.09■□□□□ 0.01
SSR4-211ENST00000486204 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.08■□□□□ 0
SSR4-211ENST00000486204 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.08■□□□□ 0
SSR4-211ENST00000486204 ERICH2A1L162 156 aa15.08■□□□□ 0
SSR4-211ENST00000486204 KBTBD13C9JR72 458 aa15.08■□□□□ 0
SSR4-211ENST00000486204 GOLGA8HP0CJ92 632 aa15.08■□□□□ 0
SSR4-211ENST00000486204 CPA1P15085 419 aa15.08■□□□□ 0
SSR4-211ENST00000486204 DNAJB2P25686 324 aa15.08■□□□□ 0
SSR4-211ENST00000486204 SLC16A2P36021 539 aa15.08■□□□□ 0
SSR4-211ENST00000486204 CCNA1P78396 465 aa15.08■□□□□ 0
SSR4-211ENST00000486204 TROAPQ12815 778 aa15.08■□□□□ 0
SSR4-211ENST00000486204 ASPRV1Q53RT3 343 aa15.08■□□□□ 0
SSR4-211ENST00000486204 GPATCH4Q5T3I0 446 aaKnown RBP15.08■□□□□ 0
SSR4-211ENST00000486204 DHX32Q7L7V1 743 aaKnown RBP15.08■□□□□ 0
SSR4-211ENST00000486204 RIOX2Q8IUF8 465 aa15.08■□□□□ 0
SSR4-211ENST00000486204 IL27Q8NEV9 243 aa15.08■□□□□ 0
SSR4-211ENST00000486204 TCEANC2Q96MN5 208 aa15.08■□□□□ 0
SSR4-211ENST00000486204 GAS2L1Q99501 681 aaPredicted RBP15.08■□□□□ 0
SSR4-211ENST00000486204 LRRC2Q9BYS8 371 aa15.08■□□□□ 0
SSR4-211ENST00000486204 ISY1Q9ULR0 285 aaKnown RBP15.08■□□□□ 0
SSR4-211ENST00000486204 SYNGAP1Q96PV0 1343 aa15.08■□□□□ 0
SSR4-211ENST00000486204 FDX1P10109 184 aa15.07■□□□□ 0
SSR4-211ENST00000486204 ERCC3P19447 782 aa15.07■□□□□ 0
SSR4-211ENST00000486204 LIFRP42702 1097 aa15.07■□□□□ 0
SSR4-211ENST00000486204 OAZ1P54368 228 aa15.07■□□□□ 0
SSR4-211ENST00000486204 EPHB4P54760 987 aa15.07■□□□□ 0
SSR4-211ENST00000486204 PLS1Q14651 629 aa15.07■□□□□ 0
SSR4-211ENST00000486204 GRM4Q14833 912 aa15.07■□□□□ 0
SSR4-211ENST00000486204 SNX17Q15036 470 aa15.07■□□□□ 0
SSR4-211ENST00000486204 SYDE2Q5VT97 1194 aa15.07■□□□□ 0
SSR4-211ENST00000486204 JAKMIP1Q96N16 626 aaKnown RBP15.07■□□□□ 0
SSR4-211ENST00000486204 TEX13BQ9BXU2 312 aa15.07■□□□□ 0
SSR4-211ENST00000486204 RANBP17Q9H2T7 1088 aaKnown RBP15.07■□□□□ 0
SSR4-211ENST00000486204 CPVLQ9H3G5 476 aa15.07■□□□□ 0
SSR4-211ENST00000486204 ARIH1Q9Y4X5 557 aaPredicted RBP15.07■□□□□ 0
SSR4-211ENST00000486204 RIPK3Q9Y572 518 aa15.07■□□□□ 0
SSR4-211ENST00000486204 PALM3A6NDB9 673 aaPredicted RBP15.06■□□□□ 0
SSR4-211ENST00000486204 PTPREP23469 700 aa15.06■□□□□ 0
SSR4-211ENST00000486204 ITGB8P26012 769 aa15.06■□□□□ 0
SSR4-211ENST00000486204 CYP2C19P33261 490 aa15.06■□□□□ 0
SSR4-211ENST00000486204 STAT3P40763 770 aa15.06■□□□□ 0
SSR4-211ENST00000486204 SNAP25P60880 206 aa15.06■□□□□ 0
SSR4-211ENST00000486204 IKQ13123 557 aaPredicted RBP15.06■□□□□ 0
SSR4-211ENST00000486204 GRB14Q14449 540 aa15.06■□□□□ 0
SSR4-211ENST00000486204 SLC35G1Q2M3R5 365 aa15.06■□□□□ 0
SSR4-211ENST00000486204 WDR78Q5VTH9 848 aa15.06■□□□□ 0
SSR4-211ENST00000486204 SNRNP48Q6IEG0 339 aaKnown RBP15.06■□□□□ 0
SSR4-211ENST00000486204 SGMS1Q86VZ5 419 aa15.06■□□□□ 0
SSR4-211ENST00000486204 ZNF654Q8IZM8 581 aa15.06■□□□□ 0
SSR4-211ENST00000486204 STAG2Q8N3U4 1231 aa15.06■□□□□ 0
SSR4-211ENST00000486204 TRPV1Q8NER1 839 aa15.06■□□□□ 0
SSR4-211ENST00000486204 TIFAQ96CG3 184 aa15.06■□□□□ 0
SSR4-211ENST00000486204 MROH8Q9H579 483 aa15.06■□□□□ 0
SSR4-211ENST00000486204 RAVER2Q9HCJ3 691 aaKnown RBP15.06■□□□□ 0
SSR4-211ENST00000486204 MAD2L2Q9UI95 211 aa15.06■□□□□ 0
SSR4-211ENST00000486204 SLC15A5A6NIM6 579 aa15.05■□□□□ -0
SSR4-211ENST00000486204 ZBED4O75132 1171 aa15.05■□□□□ -0
SSR4-211ENST00000486204 SLC25A27O95847 323 aa15.05■□□□□ -0
SSR4-211ENST00000486204 MYCNP04198 464 aaPredicted RBP15.05■□□□□ -0
SSR4-211ENST00000486204 HMGB1P09429 215 aaKnown RBP15.05■□□□□ -0
SSR4-211ENST00000486204 PARP1P09874 1014 aaKnown RBP15.05■□□□□ -0
SSR4-211ENST00000486204 ADCYAP1R1P41586 468 aa15.05■□□□□ -0
SSR4-211ENST00000486204 CPXCR1Q8N123 301 aa15.05■□□□□ -0
SSR4-211ENST00000486204 IL17RAQ96F46 866 aa15.05■□□□□ -0
SSR4-211ENST00000486204 MYL10Q9BUA6 226 aa15.05■□□□□ -0
SSR4-211ENST00000486204 UBA5Q9GZZ9 404 aa15.05■□□□□ -0
SSR4-211ENST00000486204 HCN4Q9Y3Q4 1203 aa15.05■□□□□ -0
SSR4-211ENST00000486204 DDAH1O94760 285 aa15.04■□□□□ -0
SSR4-211ENST00000486204 HOXC6P09630 235 aa15.04■□□□□ -0
SSR4-211ENST00000486204 TAL1P17542 331 aaPredicted RBP15.04■□□□□ -0
SSR4-211ENST00000486204 CASTP20810 708 aaKnown RBP15.04■□□□□ -0
SSR4-211ENST00000486204 RPS6KB1P23443 525 aa15.04■□□□□ -0
SSR4-211ENST00000486204 TLE2Q04725 743 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms