RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 LZTS2Q9BRK4 669 aa13.75□□□□□ -0.21
HPS4-214ENST00000485842 LARP6Q9BRS8 491 aaKnown RBP13.75□□□□□ -0.21
HPS4-214ENST00000485842 SPZ1Q9BXG8 430 aa13.75□□□□□ -0.21
HPS4-214ENST00000485842 AGXT2Q9BYV1 514 aa13.75□□□□□ -0.21
HPS4-214ENST00000485842 C22orf23Q9BZE7 217 aa13.75□□□□□ -0.21
HPS4-214ENST00000485842 RIOX1Q9H6W3 641 aa13.75□□□□□ -0.21
HPS4-214ENST00000485842 RBM28Q9NW13 759 aaKnown RBP13.75□□□□□ -0.21
HPS4-214ENST00000485842 SLC5A4Q9NY91 659 aa13.75□□□□□ -0.21
HPS4-214ENST00000485842 PNMA2Q9UL42 364 aa13.75□□□□□ -0.21
HPS4-214ENST00000485842 CCDC85CA6NKD9 419 aa13.74□□□□□ -0.21
HPS4-214ENST00000485842 NFIBO00712 420 aa13.74□□□□□ -0.21
HPS4-214ENST00000485842 HMGCRP04035 888 aa13.74□□□□□ -0.21
HPS4-214ENST00000485842 INHAP05111 366 aa13.74□□□□□ -0.21
HPS4-214ENST00000485842 XRCC5P13010 732 aaKnown RBP13.74□□□□□ -0.21
HPS4-214ENST00000485842 UBXN2AP68543 259 aa13.74□□□□□ -0.21
HPS4-214ENST00000485842 TRIM32Q13049 653 aa13.74□□□□□ -0.21
HPS4-214ENST00000485842 NOL8Q76FK4 1167 aaKnown RBP13.74□□□□□ -0.21
HPS4-214ENST00000485842 FBXL16Q8N461 479 aa13.74□□□□□ -0.21
HPS4-214ENST00000485842 ARMC5Q96C12 935 aa13.74□□□□□ -0.21
HPS4-214ENST00000485842 MTMR8Q96EF0 704 aa13.74□□□□□ -0.21
HPS4-214ENST00000485842 RRP36Q96EU6 259 aaKnown RBP13.74□□□□□ -0.21
HPS4-214ENST00000485842 AMNQ9BXJ7 453 aa13.74□□□□□ -0.21
HPS4-214ENST00000485842 A1CFQ9NQ94 594 aaKnown RBP13.74□□□□□ -0.21
HPS4-214ENST00000485842 FLRT1Q9NZU1 646 aa13.74□□□□□ -0.21
HPS4-214ENST00000485842 PFASO15067 1338 aa13.73□□□□□ -0.21
HPS4-214ENST00000485842 ABCB11O95342 1321 aa13.73□□□□□ -0.21
HPS4-214ENST00000485842 PTPDC1A2A3K4 754 aa13.73□□□□□ -0.21
HPS4-214ENST00000485842 POTEB2H3BUK9 544 aa13.73□□□□□ -0.21
HPS4-214ENST00000485842 PPP1R11O60927 126 aaPredicted RBP13.73□□□□□ -0.21
HPS4-214ENST00000485842 HOXC6P09630 235 aa13.73□□□□□ -0.21
HPS4-214ENST00000485842 CDC27P30260 824 aa13.73□□□□□ -0.21
HPS4-214ENST00000485842 RCAN1P53805 252 aa13.73□□□□□ -0.21
HPS4-214ENST00000485842 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.73□□□□□ -0.21
HPS4-214ENST00000485842 TRMT44Q8IYL2 757 aaKnown RBP13.73□□□□□ -0.21
HPS4-214ENST00000485842 IL17RAQ96F46 866 aa13.73□□□□□ -0.21
HPS4-214ENST00000485842 ZNF333Q96JL9 665 aa13.73□□□□□ -0.21
HPS4-214ENST00000485842 SEC63Q9UGP8 760 aaKnown RBP13.73□□□□□ -0.21
HPS4-214ENST00000485842 CNTNAP5Q8WYK1 1306 aa13.72□□□□□ -0.21
HPS4-214ENST00000485842 PNMA6FA0A0J9YX94 578 aa13.72□□□□□ -0.21
HPS4-214ENST00000485842 hCG_1642624A0A1W2PR95 340 aa13.72□□□□□ -0.21
HPS4-214ENST00000485842 CAPN15O75808 1086 aa13.72□□□□□ -0.21
HPS4-214ENST00000485842 NEK4P51957 841 aa13.72□□□□□ -0.21
HPS4-214ENST00000485842 AK2P54819 239 aa13.72□□□□□ -0.21
HPS4-214ENST00000485842 CCT2P78371 535 aaKnown RBP13.72□□□□□ -0.21
HPS4-214ENST00000485842 CNTN2Q02246 1040 aa13.72□□□□□ -0.21
HPS4-214ENST00000485842 STK3Q13188 491 aa13.72□□□□□ -0.21
HPS4-214ENST00000485842 MTFR1Q15390 333 aa13.72□□□□□ -0.21
HPS4-214ENST00000485842 ZNF792Q3KQV3 632 aa13.72□□□□□ -0.21
HPS4-214ENST00000485842 MFSD14CQ5VZR4 134 aa13.72□□□□□ -0.21
HPS4-214ENST00000485842 SLC30A10Q6XR72 485 aa13.72□□□□□ -0.21
HPS4-214ENST00000485842 CLEC4DQ8WXI8 215 aa13.72□□□□□ -0.21
HPS4-214ENST00000485842 MAML3Q96JK9 1138 aa13.72□□□□□ -0.21
HPS4-214ENST00000485842 NCOA5Q9HCD5 579 aaKnown RBP13.72□□□□□ -0.21
HPS4-214ENST00000485842 MRPL11Q9Y3B7 192 aaKnown RBP13.72□□□□□ -0.21
HPS4-214ENST00000485842 PCDHA1Q9Y5I3 950 aa13.72□□□□□ -0.21
HPS4-214ENST00000485842 LCTP09848 1927 aa13.72□□□□□ -0.21
HPS4-214ENST00000485842 DNAJC25-GNG10A0A024R161 153 aa13.71□□□□□ -0.21
HPS4-214ENST00000485842 CCDC196A0A1B0GTZ2 297 aa13.71□□□□□ -0.21
HPS4-214ENST00000485842 PRKAR2AP13861 404 aaKnown RBP13.71□□□□□ -0.21
HPS4-214ENST00000485842 CALML3P27482 149 aa13.71□□□□□ -0.21
HPS4-214ENST00000485842 SMARCA1P28370 1054 aa13.71□□□□□ -0.21
HPS4-214ENST00000485842 PDIA3P30101 505 aaKnown RBP13.71□□□□□ -0.21
HPS4-214ENST00000485842 CYP2C19P33261 490 aa13.71□□□□□ -0.21
HPS4-214ENST00000485842 ADD1P35611 737 aaKnown RBP13.71□□□□□ -0.21
HPS4-214ENST00000485842 RBM25P49756 843 aaKnown RBP13.71□□□□□ -0.21
HPS4-214ENST00000485842 BAATQ14032 418 aaPredicted RBP13.71□□□□□ -0.21
HPS4-214ENST00000485842 OLFML2BQ68BL8 750 aa13.71□□□□□ -0.21
HPS4-214ENST00000485842 RNF207Q6ZRF8 634 aa13.71□□□□□ -0.21
HPS4-214ENST00000485842 UNC93B1Q9H1C4 597 aa13.71□□□□□ -0.21
HPS4-214ENST00000485842 FAM217BQ9NTX9 383 aaPredicted RBP13.71□□□□□ -0.21
HPS4-214ENST00000485842 CYP39A1Q9NYL5 469 aa13.71□□□□□ -0.21
HPS4-214ENST00000485842 HTTP42858 3142 aa13.71□□□□□ -0.21
HPS4-214ENST00000485842 NID2Q14112 1375 aa13.71□□□□□ -0.22
HPS4-214ENST00000485842 CCL5P13501 91 aa13.7□□□□□ -0.22
HPS4-214ENST00000485842 SOX10P56693 466 aa13.7□□□□□ -0.22
HPS4-214ENST00000485842 EVCP57679 992 aa13.7□□□□□ -0.22
HPS4-214ENST00000485842 CACNB2Q08289 660 aaPredicted RBP13.7□□□□□ -0.22
HPS4-214ENST00000485842 TRAF1Q13077 416 aa13.7□□□□□ -0.22
HPS4-214ENST00000485842 PPP2R5BQ15173 497 aa13.7□□□□□ -0.22
HPS4-214ENST00000485842 ANKRD1Q15327 319 aa13.7□□□□□ -0.22
HPS4-214ENST00000485842 FAM133AQ8N9E0 248 aa13.7□□□□□ -0.22
HPS4-214ENST00000485842 GPKOWQ92917 476 aaPredicted RBP eCLIP13.7□□□□□ -0.22
HPS4-214ENST00000485842 FGD4Q96M96 766 aa13.7□□□□□ -0.22
HPS4-214ENST00000485842 PURBQ96QR8 312 aaKnown RBP13.7□□□□□ -0.22
HPS4-214ENST00000485842 BACH2Q9BYV9 841 aa13.7□□□□□ -0.22
HPS4-214ENST00000485842 RNF208Q9H0X6 261 aa13.7□□□□□ -0.22
HPS4-214ENST00000485842 MCM3APO60318 1980 aa13.7□□□□□ -0.22
HPS4-214ENST00000485842 PPFIA3O75145 1194 aa13.69□□□□□ -0.22
HPS4-214ENST00000485842 CFBP00751 764 aa13.69□□□□□ -0.22
HPS4-214ENST00000485842 RPS6P62753 249 aaKnown RBP13.69□□□□□ -0.22
HPS4-214ENST00000485842 FUT2Q10981 343 aa13.69□□□□□ -0.22
HPS4-214ENST00000485842 HEATR3Q7Z4Q2 680 aa13.69□□□□□ -0.22
HPS4-214ENST00000485842 MCF2L2Q86YR7 1114 aa13.69□□□□□ -0.22
HPS4-214ENST00000485842 TBC1D5Q92609 795 aa13.69□□□□□ -0.22
HPS4-214ENST00000485842 ZNF274Q96GC6 653 aaPredicted RBP13.69□□□□□ -0.22
HPS4-214ENST00000485842 KIF2CQ99661 725 aa13.69□□□□□ -0.22
HPS4-214ENST00000485842 TINF2Q9BSI4 451 aa13.69□□□□□ -0.22
HPS4-214ENST00000485842 TMEM106CQ9BVX2 250 aa13.69□□□□□ -0.22
HPS4-214ENST00000485842 ALDH8A1Q9H2A2 487 aaPredicted RBP13.69□□□□□ -0.22
HPS4-214ENST00000485842 TPCN1Q9ULQ1 816 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 321.3 ms