RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 SNAP25P60880 206 aa16.19■□□□□ 0.18
SCAF4-206ENST00000485790 NMIQ13287 307 aaPredicted RBP16.19■□□□□ 0.18
SCAF4-206ENST00000485790 AKNAD1Q5T1N1 836 aa16.19■□□□□ 0.18
SCAF4-206ENST00000485790 SYDE2Q5VT97 1194 aa16.19■□□□□ 0.18
SCAF4-206ENST00000485790 BTNL9Q6UXG8 535 aa16.19■□□□□ 0.18
SCAF4-206ENST00000485790 CHD1LQ86WJ1 897 aa16.19■□□□□ 0.18
SCAF4-206ENST00000485790 TMEM199Q8N511 208 aa16.19■□□□□ 0.18
SCAF4-206ENST00000485790 ESR2Q92731 530 aa16.19■□□□□ 0.18
SCAF4-206ENST00000485790 RNPC3Q96LT9 517 aaKnown RBP16.19■□□□□ 0.18
SCAF4-206ENST00000485790 SEMA6BQ9H3T3 888 aa16.19■□□□□ 0.18
SCAF4-206ENST00000485790 GPCPD1Q9NPB8 672 aa16.19■□□□□ 0.18
SCAF4-206ENST00000485790 CYP39A1Q9NYL5 469 aa16.19■□□□□ 0.18
SCAF4-206ENST00000485790 Q9Y3F1 56 aa16.19■□□□□ 0.18
SCAF4-206ENST00000485790 LAMA3Q16787 3333 aa16.19■□□□□ 0.18
SCAF4-206ENST00000485790 RLFQ13129 1914 aa16.19■□□□□ 0.18
SCAF4-206ENST00000485790 A0A0D9SFI3 127 aa16.18■□□□□ 0.18
SCAF4-206ENST00000485790 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.18■□□□□ 0.18
SCAF4-206ENST00000485790 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.18■□□□□ 0.18
SCAF4-206ENST00000485790 SDSP20132 328 aa16.18■□□□□ 0.18
SCAF4-206ENST00000485790 SLC16A2P36021 539 aa16.18■□□□□ 0.18
SCAF4-206ENST00000485790 NKX3-2P78367 333 aa16.18■□□□□ 0.18
SCAF4-206ENST00000485790 SMC5Q8IY18 1101 aa16.18■□□□□ 0.18
SCAF4-206ENST00000485790 FGD4Q96M96 766 aa16.18■□□□□ 0.18
SCAF4-206ENST00000485790 YTHDC1Q96MU7 727 aaKnown RBP16.18■□□□□ 0.18
SCAF4-206ENST00000485790 FAM161BQ96MY7 647 aa16.18■□□□□ 0.18
SCAF4-206ENST00000485790 RANBP17Q9H2T7 1088 aaKnown RBP16.18■□□□□ 0.18
SCAF4-206ENST00000485790 CCDC171Q6TFL3 1326 aa16.18■□□□□ 0.18
SCAF4-206ENST00000485790 A0A0G2JMZ2 1700 aa16.17■□□□□ 0.18
SCAF4-206ENST00000485790 LOC102724159A0A0B4J2E5 919 aa16.17■□□□□ 0.18
SCAF4-206ENST00000485790 ITGB8P26012 769 aa16.17■□□□□ 0.18
SCAF4-206ENST00000485790 HAND2P61296 217 aa16.17■□□□□ 0.18
SCAF4-206ENST00000485790 PPIGQ13427 754 aaKnown RBP eCLIP16.17■□□□□ 0.18
SCAF4-206ENST00000485790 BAATQ14032 418 aaPredicted RBP16.17■□□□□ 0.18
SCAF4-206ENST00000485790 PWP2Q15269 919 aaKnown RBP16.17■□□□□ 0.18
SCAF4-206ENST00000485790 FSCN1Q16658 493 aaKnown RBP16.17■□□□□ 0.18
SCAF4-206ENST00000485790 MUM1L1Q5H9M0 696 aa16.17■□□□□ 0.18
SCAF4-206ENST00000485790 TTBK2Q6IQ55 1244 aa16.17■□□□□ 0.18
SCAF4-206ENST00000485790 MFSD5Q6N075 450 aa16.17■□□□□ 0.18
SCAF4-206ENST00000485790 KIAA1211Q6ZU35 1233 aa16.17■□□□□ 0.18
SCAF4-206ENST00000485790 VTA1Q9NP79 307 aa16.17■□□□□ 0.18
SCAF4-206ENST00000485790 DIAPH3Q9NSV4 1193 aa16.17■□□□□ 0.18
SCAF4-206ENST00000485790 CTNNA3Q9UI47 895 aa16.17■□□□□ 0.18
SCAF4-206ENST00000485790 A0A0C4DFX4 3053 aa16.17■□□□□ 0.18
SCAF4-206ENST00000485790 ZMYM6O95789 1325 aa16.17■□□□□ 0.18
SCAF4-206ENST00000485790 PTPDC1A2A3K4 754 aa16.16■□□□□ 0.18
SCAF4-206ENST00000485790 MYADML2A6NDP7 307 aa16.16■□□□□ 0.18
SCAF4-206ENST00000485790 NUCB1Q02818 461 aa16.16■□□□□ 0.18
SCAF4-206ENST00000485790 BRDTQ58F21 947 aaPredicted RBP16.16■□□□□ 0.18
SCAF4-206ENST00000485790 EEPD1Q7L9B9 569 aa16.16■□□□□ 0.18
SCAF4-206ENST00000485790 IQCA1Q86XH1 822 aa16.16■□□□□ 0.18
SCAF4-206ENST00000485790 DGKHQ86XP1 1220 aa16.16■□□□□ 0.18
SCAF4-206ENST00000485790 KATNBL1Q9H079 304 aa16.16■□□□□ 0.18
SCAF4-206ENST00000485790 OSBPL3Q9H4L5 887 aa16.16■□□□□ 0.18
SCAF4-206ENST00000485790 SMPD1P17405 629 aa16.15■□□□□ 0.18
SCAF4-206ENST00000485790 BEX3Q00994 111 aa16.15■□□□□ 0.18
SCAF4-206ENST00000485790 GPATCH4Q5T3I0 446 aaKnown RBP16.15■□□□□ 0.18
SCAF4-206ENST00000485790 CWC27Q6UX04 472 aaKnown RBP16.15■□□□□ 0.18
SCAF4-206ENST00000485790 RNF207Q6ZRF8 634 aa16.15■□□□□ 0.18
SCAF4-206ENST00000485790 TLK2Q86UE8 772 aa16.15■□□□□ 0.18
SCAF4-206ENST00000485790 CDX2Q99626 313 aaPredicted RBP16.15■□□□□ 0.18
SCAF4-206ENST00000485790 GPHNQ9NQX3 736 aaPredicted RBP16.15■□□□□ 0.18
SCAF4-206ENST00000485790 TBX21Q9UL17 535 aa16.15■□□□□ 0.18
SCAF4-206ENST00000485790 GNEQ9Y223 722 aaKnown RBP16.15■□□□□ 0.18
SCAF4-206ENST00000485790 FRMPD2Q68DX3 1309 aaPredicted RBP16.15■□□□□ 0.18
SCAF4-206ENST00000485790 ALPK3Q96L96 1907 aa16.14■□□□□ 0.17
SCAF4-206ENST00000485790 TMEM265A0A087WTH1 108 aa16.14■□□□□ 0.17
SCAF4-206ENST00000485790 ADCY6O43306 1168 aa16.14■□□□□ 0.17
SCAF4-206ENST00000485790 PDHBP11177 359 aa16.14■□□□□ 0.17
SCAF4-206ENST00000485790 CALML3P27482 149 aa16.14■□□□□ 0.17
SCAF4-206ENST00000485790 EPHB4P54760 987 aa16.14■□□□□ 0.17
SCAF4-206ENST00000485790 ZNF543Q08ER8 600 aa16.14■□□□□ 0.17
SCAF4-206ENST00000485790 ITGA7Q13683 1181 aa16.14■□□□□ 0.17
SCAF4-206ENST00000485790 TAPT1Q6NXT6 567 aa16.14■□□□□ 0.17
SCAF4-206ENST00000485790 CXCL17Q6UXB2 119 aa16.14■□□□□ 0.17
SCAF4-206ENST00000485790 ZNF589Q86UQ0 364 aaPredicted RBP16.14■□□□□ 0.17
SCAF4-206ENST00000485790 PLEKHM2Q8IWE5 1019 aa16.14■□□□□ 0.17
SCAF4-206ENST00000485790 MORC4Q8TE76 937 aa16.14■□□□□ 0.17
SCAF4-206ENST00000485790 GUCD1Q96NT3 240 aa16.14■□□□□ 0.17
SCAF4-206ENST00000485790 WDR11Q9BZH6 1224 aa16.14■□□□□ 0.17
SCAF4-206ENST00000485790 MAF1Q9H063 256 aa16.14■□□□□ 0.17
SCAF4-206ENST00000485790 KAT14Q9H8E8 782 aa16.14■□□□□ 0.17
SCAF4-206ENST00000485790 PDGFCQ9NRA1 345 aa16.14■□□□□ 0.17
SCAF4-206ENST00000485790 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.13■□□□□ 0.17
SCAF4-206ENST00000485790 IRX5P78411 483 aaPredicted RBP16.13■□□□□ 0.17
SCAF4-206ENST00000485790 PDE4DQ08499 809 aa16.13■□□□□ 0.17
SCAF4-206ENST00000485790 IMMTQ16891 758 aaKnown RBP16.13■□□□□ 0.17
SCAF4-206ENST00000485790 DUSP28Q4G0W2 176 aa16.13■□□□□ 0.17
SCAF4-206ENST00000485790 RGS22Q8NE09 1264 aa16.13■□□□□ 0.17
SCAF4-206ENST00000485790 MTIF3Q9H2K0 278 aaKnown RBP16.13■□□□□ 0.17
SCAF4-206ENST00000485790 POLR3EQ9NVU0 708 aa16.13■□□□□ 0.17
SCAF4-206ENST00000485790 MYH8P13535 1937 aa16.12■□□□□ 0.17
SCAF4-206ENST00000485790 CTAGE5O15320 804 aa16.12■□□□□ 0.17
SCAF4-206ENST00000485790 KPNA6O60684 536 aa16.12■□□□□ 0.17
SCAF4-206ENST00000485790 IGHDP01880 384 aa16.12■□□□□ 0.17
SCAF4-206ENST00000485790 SUPT20HL2P0C7V6 817 aa16.12■□□□□ 0.17
SCAF4-206ENST00000485790 CPT1AP50416 773 aa16.12■□□□□ 0.17
SCAF4-206ENST00000485790 ALDH5A1P51649 535 aaPredicted RBP16.12■□□□□ 0.17
SCAF4-206ENST00000485790 FBXO16Q8IX29 292 aaPredicted RBP16.12■□□□□ 0.17
SCAF4-206ENST00000485790 FAM126BQ8IXS8 530 aa16.12■□□□□ 0.17
SCAF4-206ENST00000485790 RPUSD2Q8IZ73 545 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms